Sate003324.1
Basic Information
- Insect
- Smittia aterrima
- Gene Symbol
- bab1
- Assembly
- GCA_033063855.1
- Location
- CP093829.1:16930423-16944342[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-17 2.9e-14 52.4 0.0 1 43 399 442 399 444 0.95
Sequence Information
- Coding Sequence
- atGCCGTCAAACACCCCACCAAGTAAGAATTCGTCGCCGATGAGCATCATGGAGAATCGATCTCAAGACTCACTCGAACCGCCGGCAGATCTGTCGAAATTTAACATGAAGAGTGTCAACAGTGCGTCGTCAGTGAACGACAGCAACAATAACAGCAAGAACAGTAACAACACGCAGCAGTTTTGTCTCAGATGGAACAATTACCAAACTAATTTAACGTGTGTGTTTGATCAATTGCTGCAAAGTGAATCGTTTGTTGATGTAACACTCGCATGTGACGGCAACCAAATTAAGGCTCACAAAATTGTGCTTTCGGCATGCAGTCCCTACTTCCAATCGCTATTCTTCGATAATCCTTGCCAGCATCCAATCATTATTATGCGCGACGTTAAATGGCCcgaattgaaagcaattgtTGAATTTATGTATAAAGGTGAAATAAATGTGAACCAGGATCAAATTAGTCCGCTGCTAGCCATCGCAGAAATGCTGCAGATCCGTGGATTAGCTGAAGTCAACAGTGAGCAGAACGCGATGGGAAATAATTTGGCAGACACACAAATAAAGCCCAAACAAATTCCGTCGGTCGATTTGACTGCAAAGGCCAGCTCTGTGGAGTCATCTCCTGTACCAACATTCGATATTGAAGAGCAAATAAGTCATCAGGCTCAGCAATTTCATAAGAGCGACAAGCCTGAGCCAAAAAAGGCGAGAATCACGCCGAGGGATTGGGAATCATTAGCCAGTCTCGATGCTCTTACTCCACAAACGACGAAAAATCAAAGGAAACGTCGTTGGCCATCAGGCGAACGAAACAATATGGCAAACTCATCTCCGGAGAATTTGGAAACGTCTTCACCACTTTCAGTTAACCAATCACATTCTCACCCATCGCCaacttcaaatcaaattccaTCGTTCCCATTGCCGACAACACTCGACACTATCGCTTTACAACAGCTCTCGATGCATCAACCCGACGAGTTAGAAATTAAACCTGGCATTGCTGAAATGATCCGAGAGGAAGAAAGAGCCAAACTCTTGGAAAACTCCGCTTGGCTCGGCGCATCGCCATCGAACATCGCTGCTGAAAGCTATCAATATCAACTTCAATCGATGTGGCAAAAATGTTGGAATAGTCAGAACCTTGTTCAGCATATGCGATTCAGAGAGCGCGGCCCTTTGAAGTCTTGGCGACCAGAGACAATGGCAGAAGCAATCTTCAGTGTATTGAAGGAAGGCCTTTCACTATCTCAAGCAGCTCGCAAATACGATATTCCTTATCCAACGTTTGTTCTGTATGCTAACAGAGTTCATAATATGCTTGGACCGTCAATGGATGGAGGAACAGACTTGAGACCAAAGGGACGTGGTAGACCGCAGAGAATCTTGTTGGGTCTATGGCCAGACGAGCACATCAAAGGAGTCATAAAAAGCGTGGTCTTTCGCGAcgagaaaatcatcaaagaaGATCCAATGATCTATGGTCGGCAATCGCCCTTTCCGTTCCAAGATGCAAACGCCATGGGTTACCCGAACGGACTAAATCCACAAACAACCCCAGAGACAATGACGCCAGACATTCTTGCCGCTGTTAGACAGCAAATGTGCAATATGGTTGATGCCGCTAATTTCGTTGCTGGCTTTAACTTACCACCAAACATGTCAGTACAATCAATGACGCAGCCGAATTTAGGCGGAGGTTCAGGCAGTAATCTTCAAAATCCTAAACTTGGTTCACCAGCAATGAACACGATGAACAAGAATGGCGGAGAGTCGAGCAATATTTTGCAAATGCCTCGACTTGGGTCGCCAGCGATGCATAATTTACCGAACGAGCTGACAATGCATGGACTTCAAAACTTATCGCAACATGAAGATGATTTtcggaagaaagaaagaaaccgAATCAGAAAAGAATCATCGATTGATGACGACTACCCACAGCACGATGATCAtcagaagaatttaaataacaaTCGCTTGAGTATTACTAAGCTAAGTTCACCTAAAATTCACAACAAAAGTCCATCGTTGGAAGCCCTTGAGCCTGCGATTAATTTAGCCACAAGCGGACAGTCGCTCGACATGTCATTCAAGTCATCACGTACAAGCAGCGATGGCAGCATCAATGGCGACGAACCGTATCACGGTTTCAAGGACTCTTCCCCCATAAAGCTCGAGCCGATCGCCTCCGATTGCCGAGattaa
- Protein Sequence
- MPSNTPPSKNSSPMSIMENRSQDSLEPPADLSKFNMKSVNSASSVNDSNNNSKNSNNTQQFCLRWNNYQTNLTCVFDQLLQSESFVDVTLACDGNQIKAHKIVLSACSPYFQSLFFDNPCQHPIIIMRDVKWPELKAIVEFMYKGEINVNQDQISPLLAIAEMLQIRGLAEVNSEQNAMGNNLADTQIKPKQIPSVDLTAKASSVESSPVPTFDIEEQISHQAQQFHKSDKPEPKKARITPRDWESLASLDALTPQTTKNQRKRRWPSGERNNMANSSPENLETSSPLSVNQSHSHPSPTSNQIPSFPLPTTLDTIALQQLSMHQPDELEIKPGIAEMIREEERAKLLENSAWLGASPSNIAAESYQYQLQSMWQKCWNSQNLVQHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSMDGGTDLRPKGRGRPQRILLGLWPDEHIKGVIKSVVFRDEKIIKEDPMIYGRQSPFPFQDANAMGYPNGLNPQTTPETMTPDILAAVRQQMCNMVDAANFVAGFNLPPNMSVQSMTQPNLGGGSGSNLQNPKLGSPAMNTMNKNGGESSNILQMPRLGSPAMHNLPNELTMHGLQNLSQHEDDFRKKERNRIRKESSIDDDYPQHDDHQKNLNNNRLSITKLSSPKIHNKSPSLEALEPAINLATSGQSLDMSFKSSRTSSDGSINGDEPYHGFKDSSPIKLEPIASDCRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01352744; iTF_01257049; iTF_01257205; iTF_00199165; iTF_00199016;
- 90% Identity
- iTF_01352744;
- 80% Identity
- iTF_01352744;