Paka006533.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- bab1
- Assembly
- GCA_018397935.1
- Location
- CM031468.1:20636688-20650190[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 2.5e-14 52.4 0.0 1 43 396 439 396 441 0.95 2 2 1.3 1.9e+03 -1.6 0.0 1 10 522 531 522 532 0.87
Sequence Information
- Coding Sequence
- ATGCCATCAAATACGCCACCGAGTAAAAATCCATCGCCGTTGAGTATTTTAGAAAATAGATCTCAAGATTCTGAAGAGCCCCCAACAGATCTATCTAAATTCAACATGAAATCAAGCGCTACAGTGAATGATAGTAATAACAATAGTAAAAATAATTCGCAACAATTTTGCTTGCGCTGGAACAATTATCAGACAAATTTAACATGCGTTTTCGATCAGCTCCTGCAAAGTGAATCGTTTGTTGATGTTACACTTGCATGTGATGGTAACCAAATTAAGGCACATAAAATTGTGCTATCAGCATGCAGTCCCTACTTCCAATCGCTATTCTTCGATAATCCATGTCAGCATCCAATCATCATCATGCGTGATGTTAAATGGCCTGAATTGAAAGCAATTGTTGAATTTATGTATAAAGGTGAAATAAACGTGAACCAGGATCAAATTAGTCCATTGTTGGCGATTGCCGAAATGCTACAAATTCGCGGACTGGCTGAAGTGAATAGCGAAAATGCGGCAATTGGAAACAATTTGGCAGACACTCAAATTAAGCCAAAACAAATGCCGTCGGTTGATTTAACTGCCAAATCGCTTTCAGTACGTTCATCGCCAGTACCAACATTTGACATTGAGGATCAAATTAGTCAGCAAACGCAGCAATTTCAGAAACAAGAAAAGCACGCCGAGGCTAAAAAGGCGCGAATTACGCCGAGAGATTGGGAATCGATGGCGTCACAAGACGCATTAAATCCACAATCCACTAAAAATCAGCGTAAACGTCGTTGGCCATCTGGAGAGCATAACAACAATGCCACCAATTCGTCACCAGATAATCTAGAAACGTCGTCACCAATTTCAGTAAATCAATCACTTTCGCATCCATCACCATCGCCGAGTCAAGTACCATCATTTCCATTGCCCGGTTCACTTGATACATTAGCATTGCAGCAACTAGCTTTGCATCATCCCGATGATTTGGAGATCAAACCCGGCATTGCCGAAATGATACGCGAGGAAGAGAGAGCCAAACTTCTCGAAAATTCAGCTTGGCTTGGAGCATCTCCTTCTAACATGGCAGCAGAAAGCTATCAATACCAGCTACAATCCATGTGGCAGAAATGTTGGAACAGTCAAAATCTTGTTCAACATATGCGATTCCGTGAACGTGGACCGTTGAAATCATGGCGCCCTGAAACAATGGCTGAAGCAATATTTAGTGTGCTGAAAGAAGGATTATCACTTTCACAGGCGGCTAGAAAGTACGATATTCCCTATCCAACATTTGTGTTGTATGCAAATCGAGTTCATAATATGCTTGGACCATCGATGGATGGTGGCACTGATTTGAGACCGAAAGGCAGAGGGAGGCCTCAAAGAATATTGTTAGGCATTTGGCCCGATGAACATATTAAAGGTGTGATCAAGAGCGTTGTCTTTCGTGATGAAAAGAATATGAAAGATGATCAAATGGTTTATGGAAGGCAATCGCCATTCCCATTTCAAGATACCCCAATGGGATATCCGGTTAACGGCCTAAATCCACCAACAGGCACCGAATCCATGTCACCAGATGCAATGATTGCAGCAGTCAGACAACAAATGTGCAATATGGTCGATGCCGCAAACTTTGTGGCCGGCTTCCAATTACCACCAAATATGACAATTCAATCGATGACACCTTCAATGAGCAGTGGTTCAAGTAATCAAATTTCAAATCCAAAAGCTGGCTCGCCAGCAATGATCGGTCAAATTAATAAAAATGGCGGAGAGTCGAGTAATATATTGCAAATGCCACGCTTAGGTTCACCGGCTCTTCATAACTTATCAAACGATATGTCGTCTCTGCATGGTCTGCAAAATATATCGCCATCAAACGATGACATTGATTTTCGAAAACGTAATCGAATGCGTAAAGAACCATCGGGTGAAGATGATTTTATGAATTTCGATGAGCAACAAAAGAATTTAATTAACAATCGTTTGAGTATTACGAAATTAAGTTCACCAAGAAATCAAGGAAAAAGTCCATCAATTGAAGCTCTTGAGCCAGCTGTAAATCTTGCCATTTCCGGACATTCGTTAGATATGTCCTTTAAGTCATCGAGAACAAGCAGTGATGGTAGCGTTAATGGTGAAGATGGCTCACTGGGATCATATAGATCATCAAATGTAGGCTTCAAAGACACAAATCCAATTAAGATGGAACCATTAGCAGATTGTCGCGAGTAA
- Protein Sequence
- MPSNTPPSKNPSPLSILENRSQDSEEPPTDLSKFNMKSSATVNDSNNNSKNNSQQFCLRWNNYQTNLTCVFDQLLQSESFVDVTLACDGNQIKAHKIVLSACSPYFQSLFFDNPCQHPIIIMRDVKWPELKAIVEFMYKGEINVNQDQISPLLAIAEMLQIRGLAEVNSENAAIGNNLADTQIKPKQMPSVDLTAKSLSVRSSPVPTFDIEDQISQQTQQFQKQEKHAEAKKARITPRDWESMASQDALNPQSTKNQRKRRWPSGEHNNNATNSSPDNLETSSPISVNQSLSHPSPSPSQVPSFPLPGSLDTLALQQLALHHPDDLEIKPGIAEMIREEERAKLLENSAWLGASPSNMAAESYQYQLQSMWQKCWNSQNLVQHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSMDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKSVVFRDEKNMKDDQMVYGRQSPFPFQDTPMGYPVNGLNPPTGTESMSPDAMIAAVRQQMCNMVDAANFVAGFQLPPNMTIQSMTPSMSSGSSNQISNPKAGSPAMIGQINKNGGESSNILQMPRLGSPALHNLSNDMSSLHGLQNISPSNDDIDFRKRNRMRKEPSGEDDFMNFDEQQKNLINNRLSITKLSSPRNQGKSPSIEALEPAVNLAISGHSLDMSFKSSRTSSDGSVNGEDGSLGSYRSSNVGFKDTNPIKMEPLADCRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01352562;
- 90% Identity
- iTF_01257205;
- 80% Identity
- iTF_01257205;