Sory014064.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- Lztr1
- Assembly
- GCA_002938485.2
- Location
- NW:2127405-2142614[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.9e-11 1.3e-08 34.7 1.2 7 108 367 503 361 505 0.87 2 4 0.02 4.4 7.2 0.2 77 108 504 535 502 537 0.89 3 4 4.7e-17 1e-14 54.3 0.0 8 99 596 689 591 701 0.85 4 4 4.3 9.4e+02 -0.3 0.0 58 100 701 724 695 733 0.56
Sequence Information
- Coding Sequence
- atgagttattttactttagttGGTGGTGACGCGAATTCTGGACTTTCTGAGGCATTTACTCTGGAAATTGGACCATTTGAAGCTGTACACCGATGGAAGTCATTACCTGAATGTGATGAATTTGTTGGAGCTAGgcGAAGTAAGCATACCATGGTTGCTTATAACGATGCTATTTATGTATTTGGAGGAGACAATGGAAAAAGTATGCTAAATGATTTGTTGCGATTTGATGTCAaagaaaaaagttggggaagGGCCTTTGCAACAGGTGCTCCACCAGATCGAAGATACCATCACTCTGCTGTTGTTTATAACGATTCCATGTTTGTATTTGGCGGTTATACCGGGGATATTCATTCAAACTCAAATTTGGCAAACAAAAATGATTTGCatgaatataaatttaaaactggtCAATGGCTAGAATGGAGATTTACTGGCAAAATGCCTGTGCCTAGGTCTGCTCATGGAGCAGCTGTGTATGATGATAAACTTTGGATTTTTGCTGGATATGATGGCAATGCTAGATTAAATGATATGTGGACTGTTTCATTAACTTTGGGTGACAGACAATGGGAAGAAGTAACTCAAAAAGGTGAATGCCCACCAACTTGTTGCAATTTTCCTGTTGCAGTGGCCAGGGAGTGTATGTTTGTTTTTAGCGGTCAGAGTGGAGCAAAAATTACAAATTCTCTATTTCAATTTAGCTTTAAAGAGAAGGTCTGGACTAGAATATCAACTGAGAAAATACTGAGAGGCGCCCCACCTCCTCCTGCTAGAAGATATGGTCATACCATGGTTTCCTTTGACAGACACTTGTATGTCTTTGGAGGTGCAGCTGATGCAACTCTATCAAACGATTTGCACTGTTTTGACTTAGATTCTCAAACCTGGAGTATTGTTCTGCCTGATCCAGAATCACATGCACCTTCTGGAAGGCTTTTTCATGCAGCTGCAGTTGTCAATGATGCAATGTTTATCTTTGGTGGAACAGTGGATAACAATGTACGTAGTGGAGAGATGTACAGatttCAGTTTGCAAGTTACCCAAAATGTACTTTACATGAGGATTACGGAAAGTTATTGAACAAGGAGGAATTCAAGAGGTACAATGACATCTGTTTTGTAGTGGGAGAGAGAGAGGAAAAGATCTATTGCCACATTCCTATAGTGGCAGCACGTTCGGCTTATTTGAGAGATAAAATCAGACAAGCTAAGTTAGCTGCAGCCAAACTGAAGTCAGCTGCAGAGAAAGCCAGCGACGAAACATTGAtcggCCAAGAAGAGCAGCAATTTTTGGAAGTCTTACTTCCTAAAGCAAATTGTGATGCTTTTAAAATGGTTTTAGATTATATTTATACTGATTATATTGACCCGTCAAAATATATTACCAAAGATGAAACAGATCCAGAAAAAACTATTCTAATAAGgGTTATGGATGTTTACCAGCTTGCTGAAGAATTCAAGATGATGCGATTAGAACATTTATGCGTGCAATTTCTAAACACcacaatttgtttaaacaatatAGTGGAGGCGTTGAAGAACGCCGACAAACTAAAGCTCGAATTTATTAAAGAACAATGCCTGAAATTCATAGTGAAGGAGACgaattttaatcatataatcATGAGTGCGGAGTTTGAGACGCTGGACAGCAAGCTGATGGTTCAGATCATTCGTAGGAAACAGATACCTCCTAAGAAGACTTCTCACGAGACCGTTTTTGATCTAGCCAGAAATTCACTAGAATTCGATATGGAACGATTTCTGCTGGTTACCGGCAAAGAATTTTGCGATGTAGATTTAATTTTGGAGAACCAAGTCATTCCAGCTCATAAAGCAGTTCTTGTGGCCAGGTCTGGCTACTTTGAGGGCAGGTTTAGATCGTATATGCCCAACGAAAGTGACAAGATTGTTAACATAAAAATCGGCGAGTTGACACCTTCGAGAAAATCCTTTGACACCCTCCTCCGCTACATCTACTATGGAGACACCAAAATGCCCCCCGAAGACTCCCTGTATCTGTTCGCGTCCGCGTTCTTCTTTAACTTCTCCAACATCCGTTTGCAAGCGTTCTGCAAGCAAAACCTCGAAAGGAACGTCACTCCGGAAACGGTGCTGGAAGTCCTGGAAGCGGCACACACTATCCAGGCCACCGACATGAAGAAGTACACGTTGGACTTCATCGCGATGAATTTCACCAAGGTGGTGAACCAGCCGAGGTTTGCCATGCTGGACAAGGCTTTGATGTTGGACTTGTTGTACGCACTGGCGGATTGTATGGGTGGTAACGTCAACACCGACCCATGA
- Protein Sequence
- MSYFTLVGGDANSGLSEAFTLEIGPFEAVHRWKSLPECDEFVGARRSKHTMVAYNDAIYVFGGDNGKSMLNDLLRFDVKEKSWGRAFATGAPPDRRYHHSAVVYNDSMFVFGGYTGDIHSNSNLANKNDLHEYKFKTGQWLEWRFTGKMPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTVSLTLGDRQWEEVTQKGECPPTCCNFPVAVARECMFVFSGQSGAKITNSLFQFSFKEKVWTRISTEKILRGAPPPPARRYGHTMVSFDRHLYVFGGAADATLSNDLHCFDLDSQTWSIVLPDPESHAPSGRLFHAAAVVNDAMFIFGGTVDNNVRSGEMYRFQFASYPKCTLHEDYGKLLNKEEFKRYNDICFVVGEREEKIYCHIPIVAARSAYLRDKIRQAKLAAAKLKSAAEKASDETLIGQEEQQFLEVLLPKANCDAFKMVLDYIYTDYIDPSKYITKDETDPEKTILIRVMDVYQLAEEFKMMRLEHLCVQFLNTTICLNNIVEALKNADKLKLEFIKEQCLKFIVKETNFNHIIMSAEFETLDSKLMVQIIRRKQIPPKKTSHETVFDLARNSLEFDMERFLLVTGKEFCDVDLILENQVIPAHKAVLVARSGYFEGRFRSYMPNESDKIVNIKIGELTPSRKSFDTLLRYIYYGDTKMPPEDSLYLFASAFFFNFSNIRLQAFCKQNLERNVTPETVLEVLEAAHTIQATDMKKYTLDFIAMNFTKVVNQPRFAMLDKALMLDLLYALADCMGGNVNTDP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01107690; iTF_01307338; iTF_00830514; iTF_00196419; iTF_00431527; iTF_01188375; iTF_01240951; iTF_00444249; iTF_01239264; iTF_00376413;
- 90% Identity
- -
- 80% Identity
- -