Sory012452.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sitophilus oryzae
Gene Symbol
BAZ2B
Assembly
GCA_002938485.2
Location
NW:4335140-4381549[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4 5.7e+03 -3.3 0.0 37 58 99 120 99 128 0.81
2 2 1.8e-15 4.3e-12 45.2 0.0 5 75 369 440 366 442 0.90

Sequence Information

Coding Sequence
atgccAAAGAAGCTTAAATCTAGACTAATAAAACGTTTTCTTCTAAGTAGTGCTGCATTGGAAGGAAGCAGTGATCCTAATTCAATTTTGGGTGGTGTTAGGTTGCCACCTGACACCGAAATTATCAAGTACACCTCTTCCATCGTGGGACCCAAGATTCCGGGAACCACCAATCGCGGCAGGAAGAAGACAATTTCCCTAGATCCGCCTTCCGTCAGTGTTCTTCCTTCTCACTCCAGCACAGGGTTATCTATTGAGAGAACATTAAAACGGGCAAGACTATCGGATGATGATACGCCAGGAGGTACATCCATGTCAGATAGAGTTGAAGTCATCAAACTTCCCGCCACCAATGGAAGTCCATCAGGTATTTCATCATTCAACTCTAGTGATGGTTCTGGAGAGGCCCCATTAAATCTTTCTCTCAAACCAAACTACACAACCAGTGGTAGTACTTCATCTCTAAATTCTTTAAGCAATATGAGTGCTAATATAGGATCGGACCGAATCTCTCGACGGAAACCGGGACCCAAACCGCGCCGCGTCATTCCAATGGAATCGACACCACCCCCTCCTTCTAGCACTCCCAATACCATACTGAATCAGTACTTCTCCGGGATCGATTCGCCAAGGCCTCCAAGTCGGAACGAGGGTTCGGACGGTGGTAGTTCCACTTCGTCCACGTCGGCGGCGCCATCAGGCCCGTCGGGGACCGGAGGAATCAGTATAATGAATCACAAAGAGGGCAGACCGAGGAATTTAGGCCGGGGCGTCAGCAAACCCAAGAAGAATACGGTTGCGTCTTTGTTAGCGCAAAGTAGAGCATTAGGAATTAAGCCAGTGCCAATGTTAGACCCCAACGCTTCAATGAACCAGCAGATGAACCTTTTGAAGTCGAACATTTTGGCGGCTCAGCAGTACATTTCCGAGGCGGGCGGTGACGAAAAAGCTTTAAATAAATTCCTACAGGAAAGGTTTAAGGGCACTTTAAGTGATAGTAGTACGGTAGACGCTTCTGATTCTGATAACCTAACTGATTCTAACCATACTGATTCAGAGATCGAGACCGAGATCGTGGCCAAGAAACAGAAGCAGTACGACGAGCGGTTACTCAGGGTTCCATTGGAAAGAGGCTGGAAAAGAGAAACTGTTATTAGAGGAGTTACTAAAAATGGAGGAATAAGGGGGGACGTCTCCTACGCTGCTCCAGATTCTtctaataaatttaaacaaatgtCCGATATTACACAGTACTTAGAATACCAAAAAAGCACAGAACTGACAAAAGACAACTTTACGTTTAGTTGTCGAGTTATTATAGGCGATTACTTACAACCAGTACCTCCAGAAATGCAGACTGATGGCAacgaatatatttatttgactgAAGAAGATGTTACAAAAAGACTTGAAGAACTGAGAGCAGCAATGCGAACAAGTTTACCTGTAGAACAACGAATAGAAATGGCCAAGAAACAGCAGGCTGCTCGTGCGGCGGCTCGCCTAGACAGAGAACAACAAAGGCTAACAAAGGAGTTAGAAAGAAATGAACGCCAAGAAGCCGCACGAAGAGAACGGGAAGCTAGATCTCAACAGCTATTAGAGGCTAAAAGGAAACGCCAAGAAGAGTTAGAGAAACAAAAACAAGAAGAGCAACACCGGAAACAACAGGAGAGAGAATTGAAAAGACAGCAAGCCGCTATGCTAAAAGAACAAATTTACATACAGGAGATCAATAAACAACGAGAAATGCTGTACACTGTTGAGTTGgAAAAGGAGAGGCGTCGACAACACCTGGCTTTAATAAAGGCAATGGAAAGTCgtcgaaaacttgaagaaaaagaaaaaaggaaGCAGCAACTTTTAGCTGAGAAACAGGCTAATAAAGAAAAGAAACTGGAACAAAGACGGGTAGATCTAGAGATACTGACTGAACTAAGGAAGCCTTGTGAAGATCTGGAATTAAATCAAAAACCGTTACCAACATATGAGCGAATACATGGACTAAAGCTCTCCGGAAAAGCATTTGCCGACACATTAATGATCTTCGAGTTTTTGCATAATTTCGGTGAAACTTTGGGTTTTGACATGGACTCGTTGCCAACCTTGGATTCAATACAACAAGCGTTGGTGCCCAACGATCATTCATATGAGGCAGAAGAAGAACTGTTCTCGGTAATAACACACCTTTTAGTTTGTGCCATCGAAGATCCTGGTATTCCCAATCCTGCCAGACATACCACGATCCTAGGTCAAAGTTTACGCCAAGCTGATATTACCCACGTCAATTTATCTGAGATTCTGAGAATATACTTGTACGCAAATGCGACGGGTGAAGTTAAAGCACTGACTGGAGTGCATTTTGAGAGGGATAGAGAAAAAAGGATAGCGGATCATCATCAAACTGAAGACGAAATGCAACAAACAGTAGCTGGAAAAAATTCCCATTACTACGAGTTGTTACATGAAAATCCCACTTACAAAATGTCAGACTTATTAAAGGACAAACCCTTTATAGCTTTGTCTCCAACTGATAAAGCCGCTATTCTCGCTTTCATCTGTAACGAGTTATTACAAAATAAAGCTGTTACTAGACAAATCGaaaattctttagaaaatatgATTCAGCATAAAAAAGAGAAATGGCTTTTAGACCAGAAAATTAGGAAGCTAAAAGTTGTTCATAGTAAGAAATTGAGAACTGAAGCATTGGAAAAATCTCACAACAAAAGCGAGATGGAAGAAGGTGCTCTCGATTCACCTCATTTGTTACATAAAGACGACTTATTGGAAGATGAGGAGCATGAGATGAGCGACAATGAAAGTGTCGGTACTCAACCAGAAGAGGAAGAAGATGCTAAGTTATCGGGCGAGGAACTAgccaaaaaattagaaaaactcTCCCAAACATCCGAAAACCATCTGCAAACTATAAATACGTCCATGTCACAATTGCGAGCAGTCACTTTTGGAGAAGATAGGTATTTTAGAAGATACTGGTCTCTCCCGCGTTCTGGTGGAATTTTTGTAGAAGCAATGGAGTCGGCCGAACCTGAAGAGTTTGAAGAACAATCCAAAAACGATCAAGTAGAGAACTTAAGTAACGGTATTAGAAACCTGAATGAACTTCATAGTGTGATTGAGAAGGTGGAGAAAATTGATGACCACGCCGACGACAAGGAAGTTAGCAGTATAGTTGGGGGATCTGACACTGATAAAGAATCTAACATTGCCATAATTAAACCTCAGACTAATAATAACGAAAGTGAGCACAGGAAGACGCCGAATAGATTAGAGAACGGTGAAATAACAGAAACACATAACTTAGCAGAGTTAAATAAGAGCGTTGAGAACATAGTACAAAGTTTAGAAGAGAGAATAGAGGCGTGCAAAGAAGAAAAACTTACAGAATCTCAATTACAATCTGATATCAATGATGCGAAAAATCTAGACGACAGTGATTCTATTTCTAATAGgaaatttaatttattcgaaAGGTTAGGCCAATGCATGGAGCGGGAAAATAGAACCGAGGAAGATCTGAAAGCCGAAGTAAAGGCAGAGGTGAAGGAGGAACTTAAAAAcgaaattttgaaagaactaaAGCAGGAAATTAAATCTGAGATAAAGACGGAACTGGAAGAAAACGACGAATTCAAATGGTTCAGTATTTTACATAAAGATGGCTCCACGTGCGACGAAGTACATCTAACGGCCGGGAATAAGTGGGATAACGGTAACGTAGGCGCCTGCACAAAAGATATTACCGAGTTAAAAATACCTGTTTTCCCACCGCCTTGTTCGAACAGCGGGATGAACTTACATCATAACTGTGAAAGTCCTGCTCCGCTCCAAATGACGTCTGAAGAAAGCGTTCAGTTAGAGCTTATTAGAAAGCACGGTATGCCTTCGTCGTTTGAGAAGAAACCCGTACCTTTCGACCAGCGGTACGGCTGGTGGCGAATTAAAACTTTGGAACAACTACGGGAAGTGCTAGAAAATCTTCACGTTCGAGGTGTAAGAGAACGAGAATTAAAAAGAAGTTTTGTAATCAATATGCAGCAGATGTACAACAAGGGAAAATTAGTAATTGAAGAGGGTTGCGACGAACTGACGAAATTAAGTGGTGAAAATATCGAAAATATAAACTTCGTAGTCGGAGATATTCCTATGCCGGATGTACCCGGTTCATGGAGCAAGGTCATTGCACACAGGGTAGATATGTTTCTGCTAGAACAGGTTGAAGCATTGGAAGACAAAGTTGCAAGCGCGAGTATGCAGGTTAAGGGTTGGAAAATTCCCGAACGGGACACTGACGATATTCCTTACGGAGAAGTCgtgaatataataaaaaataagctcTCTTCGTTGGAAATTAATATTGAGAGGCGGTATTTGAAACCACCTTTAGGTGTCAAcaCTAATATCCGTTCGAGTACAGGCAGCAGTCAGGACTCTAGTTTCCAATCTACAACCGTCGAATCGGCCACAAGTACCCCCGTTATATCTCAACAAGTTCCACCACCCGACGATATACCCAAAGGCCTTGGAGTGTGGCGCGAAGCAGTGAACAGGGCCTCTACGTCTGCCCAATTGGCTATGTGCCTCTACTCCTTGGAATCGTCGATCGCCTGGGACAAAAGCATCATGAAAGCTGTGAGCGAACCTGCAGAATTTAGCATACAGAACGCCCGCAAATATAACAGCAAGCTCAGTaacTGCCAATTTTGCCATAGTGGAGATAATGAAGATAAACTTCTCCTGTGCGACAGTTGTGACAGGGGATATCACACATATTGTTTTAAACCCAAAATGGAAAATATTCCTGAGGGAGATTGGTACTGCCACGAATGTATGAACAAAGCAACTGGCGACCGAAATTGCATAGTATGCGGTCGAAAAATGTCCACCACTGGTACCAGACTACTCGTCTGCGAGTTGTGCCCTAGGGCTTATCACACCGATTGTATCCAGCCACAGATACATAAAGTTCCGCGCGGTAAATGGTACTGCACAAACTGTTTTTCTAAGAAACCTCAGAAAAAGCCAGTGAAGAAAAATCACACTAAACCTACAAAAGAAAACGAATCGGCACCTGAACAGCCACCCGCTAGTCCGGCTCCGTCTCATAGTTCAGTAACGACTAACGATGACGTACCGACAACGAACTGTAGTCAGAACAGCGATGTTTCGAATTCGAGTTTAACCAGCGGTTTGATTAACGCTGGTTCTCCGTCCACCTGCGCcaaaaaagaaaaagagaaGGCCAACAAGAAGTTGATGAAAGAACTGACACCGTGTAGACTTATTCTTGAAGATCTCGAATGCCACGATGACGCCTGGCCGTTCCTATTACCGGTTAACACCAAACAGTTTCCTACCTATAAGAAGATTATTAAGATTCCTATGGATTTATCCACGATTAAGAAACGACTGCAAGATTTGGTgtataaatcaagagaagaaTTTTGTTCAGACGTCAGACAGATCTTTAACAACTGTGAAACTTTTAATGAAGATGATAGTCCTGTCGGTAAAGCTGGTCACTGCATGCGACAGTTTTTCGAATCTAGATGGAATGAACTTTGTGCCTCCCATAGTTGA
Protein Sequence
MPKKLKSRLIKRFLLSSAALEGSSDPNSILGGVRLPPDTEIIKYTSSIVGPKIPGTTNRGRKKTISLDPPSVSVLPSHSSTGLSIERTLKRARLSDDDTPGGTSMSDRVEVIKLPATNGSPSGISSFNSSDGSGEAPLNLSLKPNYTTSGSTSSLNSLSNMSANIGSDRISRRKPGPKPRRVIPMESTPPPPSSTPNTILNQYFSGIDSPRPPSRNEGSDGGSSTSSTSAAPSGPSGTGGISIMNHKEGRPRNLGRGVSKPKKNTVASLLAQSRALGIKPVPMLDPNASMNQQMNLLKSNILAAQQYISEAGGDEKALNKFLQERFKGTLSDSSTVDASDSDNLTDSNHTDSEIETEIVAKKQKQYDERLLRVPLERGWKRETVIRGVTKNGGIRGDVSYAAPDSSNKFKQMSDITQYLEYQKSTELTKDNFTFSCRVIIGDYLQPVPPEMQTDGNEYIYLTEEDVTKRLEELRAAMRTSLPVEQRIEMAKKQQAARAAARLDREQQRLTKELERNERQEAARREREARSQQLLEAKRKRQEELEKQKQEEQHRKQQERELKRQQAAMLKEQIYIQEINKQREMLYTVELEKERRRQHLALIKAMESRRKLEEKEKRKQQLLAEKQANKEKKLEQRRVDLEILTELRKPCEDLELNQKPLPTYERIHGLKLSGKAFADTLMIFEFLHNFGETLGFDMDSLPTLDSIQQALVPNDHSYEAEEELFSVITHLLVCAIEDPGIPNPARHTTILGQSLRQADITHVNLSEILRIYLYANATGEVKALTGVHFERDREKRIADHHQTEDEMQQTVAGKNSHYYELLHENPTYKMSDLLKDKPFIALSPTDKAAILAFICNELLQNKAVTRQIENSLENMIQHKKEKWLLDQKIRKLKVVHSKKLRTEALEKSHNKSEMEEGALDSPHLLHKDDLLEDEEHEMSDNESVGTQPEEEEDAKLSGEELAKKLEKLSQTSENHLQTINTSMSQLRAVTFGEDRYFRRYWSLPRSGGIFVEAMESAEPEEFEEQSKNDQVENLSNGIRNLNELHSVIEKVEKIDDHADDKEVSSIVGGSDTDKESNIAIIKPQTNNNESEHRKTPNRLENGEITETHNLAELNKSVENIVQSLEERIEACKEEKLTESQLQSDINDAKNLDDSDSISNRKFNLFERLGQCMERENRTEEDLKAEVKAEVKEELKNEILKELKQEIKSEIKTELEENDEFKWFSILHKDGSTCDEVHLTAGNKWDNGNVGACTKDITELKIPVFPPPCSNSGMNLHHNCESPAPLQMTSEESVQLELIRKHGMPSSFEKKPVPFDQRYGWWRIKTLEQLREVLENLHVRGVRERELKRSFVINMQQMYNKGKLVIEEGCDELTKLSGENIENINFVVGDIPMPDVPGSWSKVIAHRVDMFLLEQVEALEDKVASASMQVKGWKIPERDTDDIPYGEVVNIIKNKLSSLEINIERRYLKPPLGVNTNIRSSTGSSQDSSFQSTTVESATSTPVISQQVPPPDDIPKGLGVWREAVNRASTSAQLAMCLYSLESSIAWDKSIMKAVSEPAEFSIQNARKYNSKLSNCQFCHSGDNEDKLLLCDSCDRGYHTYCFKPKMENIPEGDWYCHECMNKATGDRNCIVCGRKMSTTGTRLLVCELCPRAYHTDCIQPQIHKVPRGKWYCTNCFSKKPQKKPVKKNHTKPTKENESAPEQPPASPAPSHSSVTTNDDVPTTNCSQNSDVSNSSLTSGLINAGSPSTCAKKEKEKANKKLMKELTPCRLILEDLECHDDAWPFLLPVNTKQFPTYKKIIKIPMDLSTIKKRLQDLVYKSREEFCSDVRQIFNNCETFNEDDSPVGKAGHCMRQFFESRWNELCASHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00376341;
90% Identity
-
80% Identity
-