Smos008571.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- pnr
- Assembly
- GCA_009176505.1
- Location
- VUAH01000001.1:1199648-1204542[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-06 0.0067 16.1 2.7 1 26 390 413 390 419 0.96 2 2 2.9e-18 1.1e-14 53.8 6.2 1 35 441 474 441 475 0.97
Sequence Information
- Coding Sequence
- ATGGTGACCGACACCGATGACGCTGATAAAAAGAAGATCAAAATTGAAGAGCCGTCGGAAGAAATTGCCGCACAGCCAAATCAACCAACGGTCCATGGACAAGAATCACCCCAGAGCCAAAATCAACCACAGGAATTGATTACAGCGGAGGGTGTACACAATTCCACGCTTTCGTCCGAGACAGATACCGTAGCGTCGGCATCTTTGCCAACGACTGTCATTACGACACAAAGACATCGCATGATCACCACTACGGGACAGATtcgGGAAATCGAAgacataaatgaaattgagccACAAAAAGAGTACGTGCAACGCTATCAATTGGTACCAGTGAGTGAACCATCGTTCAATCAGCACATTTACGAACAGCATGGCGCTAGAGGGAGATTGGCCAGTGATAGCCCAGAATCGGGTAACATTGCCATCCCAAACAATGGCACTATTTATGTAACGTCACAGCATCCAAACGCTGGGGAGAATATCAATGGCATTAGATATGCCGTGCCACCAGAAGTTCGTTTCGAAGATGAAACATATGCGACGGCCAGATATGAATATCAACACGGTCAACATCATCCAAATGCACATAATGCACATTCCGGTTCGAGCGATGACATCAAAATCGAACTGATCCGAAATCAACATGCTCTGCATAGCAAGATTCACATCGAAGATGCACACCAACCGACGCCACAATCCGAGGCAAAGATTCAGTACACAAATTTGGATGTATCACCGCAAAACTACTACAGCATCGCAACGGACGGTTATCCAACCGGAAGTGGTTTTGCGTATATTTCGACGACATCAAACAAGGATTACATCTATCCAGGCAGTCCGAATACAGTTCTCTACAAAGgcGATCCGTCGTTGGCGTCAGCATTTAACAGTCGATACAACGGAGCATTGTCACAACATCAAGGCATTATCTACGATTCAAACTCGATCCAACAATCCGGATCGCCAGTGCCACAAGTGTACACGAGTAATTGTAAACCAGAGTCAGGTTATTGGCATCAAGCCTCTGAGTATAATGTAAATGCTGCTCCGTTCGGTCAAACGATTGTGTTGGACGGTGGAAGTGATTATGTGGCCAATGGCGCATCTTGGCAATTACAGCCCGAACCATATGATCCTCAATTGGTTGCAACCGGTGCCCCAGAATGTGTGAATTGCTCAACGTCACAGTCTGTTTACTGGAGACGTGTCGACGGTCATCCAATGTGTCATCAGTGTTCATTTACGCGTCAAACTCGACCGAAAATCGCCAAAAATAAACCACCCGTCGCGCAAGCCAATAGAAGGTCGGGCGTTATTTGTGCCAATTGTAAAACGAGCACCACCACATTGTGGCGACGAAACAATCATGGCGAGCCCGTGTGCAATGCATGCGGATTATACTTCAAACTACACAACGTCAATCGACCGCAAAGCATGAAAAAAGATGGCATTCAAACGAGGAAacgcaaaccaaaatattcattgcAAGCCAAACCAAAAACATCACCAATCAGTGaTAAAATGTTGCCGCCGCTTTTTCCATCCCAAATTCATATTCAGCCCGAGATGAAAATTCCCATTTTACAAGCCCATCAGGCGACACAGAATCAATTATTAGCTCACGCCCAAAATCAATCGCCATCACAGCATCCGCAAGAAGTGCACATTAATACGGCAACAACACAAGGACCAGGCACCGAACACTATATTACCGTTGCTCAAACACATGCAACACATTTGCCGCACGTGAGCAATTTGAGCCGCTCGATTAATGCCAGtATTCCATCAATAGACGGACAACATGGTGCAAATACTAAACTAACCAGCGTCATCACTTGCACCGGAACACCCGACcaaatcgaacaataa
- Protein Sequence
- MVTDTDDADKKKIKIEEPSEEIAAQPNQPTVHGQESPQSQNQPQELITAEGVHNSTLSSETDTVASASLPTTVITTQRHRMITTTGQIREIEDINEIEPQKEYVQRYQLVPVSEPSFNQHIYEQHGARGRLASDSPESGNIAIPNNGTIYVTSQHPNAGENINGIRYAVPPEVRFEDETYATARYEYQHGQHHPNAHNAHSGSSDDIKIELIRNQHALHSKIHIEDAHQPTPQSEAKIQYTNLDVSPQNYYSIATDGYPTGSGFAYISTTSNKDYIYPGSPNTVLYKGDPSLASAFNSRYNGALSQHQGIIYDSNSIQQSGSPVPQVYTSNCKPESGYWHQASEYNVNAAPFGQTIVLDGGSDYVANGASWQLQPEPYDPQLVATGAPECVNCSTSQSVYWRRVDGHPMCHQCSFTRQTRPKIAKNKPPVAQANRRSGVICANCKTSTTTLWRRNNHGEPVCNACGLYFKLHNVNRPQSMKKDGIQTRKRKPKYSLQAKPKTSPISDKMLPPLFPSQIHIQPEMKIPILQAHQATQNQLLAHAQNQSPSQHPQEVHINTATTQGPGTEHYITVAQTHATHLPHVSNLSRSINASIPSIDGQHGANTKLTSVITCTGTPDQIEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288690; iTF_00133911; iTF_00367839;
- 90% Identity
- -
- 80% Identity
- -