Basic Information

Gene Symbol
pnr
Assembly
GCA_029041755.1
Location
JAQOWM010000635.1:1363464-1366795[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-06 0.009 16.2 3.0 1 27 408 432 408 438 0.94
2 2 4.8e-18 1.6e-14 53.8 6.2 1 35 459 492 459 493 0.97

Sequence Information

Coding Sequence
ATGGAACGAAAATGGAATGCAAAATCACTAATAAATATTAACGTTTTGGAAGTGACCGACACCGATGATATTGATAAGAAAAAGATCAAAATCGAAGAACCGTCGGAAGAAATTAATAcgcaaacaaatcaacaaacaacTGTGCATGGACATGAATCACcacaaaatcaaacacaacatcaaaatcaaccaCAAGAATTAATTACAACGGATAATGCACACAATTCAACATTATCCACTGAAACGGATACAGTGGCAACGGTTTCATTACCGACTACTGTTATTACAACACAGAGGCATCGCATGATTACCACAACGGGACAAATTCGaGAAATCGAAGATATCAACGAAATTGAGCCCCAGAAAGAGTATGTGCAACGTTATCAATTGGTGCCAGTGAGTGAACCATCATTTAATCAACAAATCTATGAACCACATGGAACTAGAGGACGATCAACAAATGTTAGCCCAGAAACTGGTAATATTTCCATTCCAAACAATGGCACCATTTATGTCACATCACAGAATCCAAATGCAGCGGAAAATGTGAATGGTATTCGGTATGCAACAGCACCTGATGTACGATTTGAAGATGATACATATGGAACAACCAGATTCGAATATGGACAACATCATTCCAATGCACATAATACACATTCAGCAAGTGGTGATGATATTAAAATCGAACTGATTCGTAATCAACATGCCATTCATGGAAagATTCACATTGAAGATGCACATCAACCGCCGCCACAATCTGATGCCAAGATTCAATACACAAATTTAGATGTATCACCGCAAAGTTACTACAGCATCTCAGCGGATGGTTATCCAACCGGAAATGGTTTTACATACATATCAACGACACAAAATAAAGATTATATATATCCCGGCAGTCCGAATACAGTTCTCTACAAAGGCGATCCATCGCTTGCGTCAGCCTTTAATAGTCGATACAATGTTCCATTGTCGCAGCATCAAGGGATAATCTacgattcaaattcaattcaacaatcTGGATCGCCAGTATCACAAGTGTATACAAATTGTAAACCAGAGTCGGGTTATTGGCATCAAACATCCGAATACAATGTGAATGCTCCATTTGGTCAGACAATCGTATTGGATAACGGAAGTGATTATATAGCGAATGGCGCATCGTGGCAATTACAGCCCGATTCATATGATCCTCAATTGGTTACAACTGGTGCACCATCCGAATGTGTAAATTGTTCAACATCACAATCAGTCTATTGGAGACGTGTTGACGGCCATCCAATGTGTCATCAATGCACATTCACGAGACAATCTAGACCgaaaatttctaaaaataaacCACCAGTTACACAAGCAAATAGAAGGTCAGGTGTGATTTGTGCCAACTGTAAAACAAGCACCACAACTCTTTGGCGACGAAACAATCATGGCGAGCCTGTATGCAATGCTTGTGGATTATATTTCAAACTTCATAATGTAAATCGGCCGCAAAGCATGAAAAAGGATGGCATTCAAACAAGAAAACGCAAACCAAAGTATACAATgcaatcaaaaccaaaaacatcACCAATCTCTGAAAAAATGCTTCCGCCGCTATTTCCATCACAAATTCATCTGCAGCCTGATATGAAAATTCCCATATTGCAAGCCCATCAATCAGCTCAAAATCAAATGCTAGCACACGCTCATAACCAATCACCGTCCCAACATTCGCAAGAAGTGCACATTAATGCCAGTGGACAAGGATCAAACGAACATTATATTAGCGTCGCACCAACACATCCGACGCATTTACCTCACGTTAGCAATTTGAGTCGTCACATTAACACCAGtGTTGCATCAATAGACGGACATGGTTCAAATACAAAGCTGACGAGTGTCATCACTTGCACTGGAACACCAGACCAAATCGAACAATAA
Protein Sequence
MERKWNAKSLININVLEVTDTDDIDKKKIKIEEPSEEINTQTNQQTTVHGHESPQNQTQHQNQPQELITTDNAHNSTLSTETDTVATVSLPTTVITTQRHRMITTTGQIREIEDINEIEPQKEYVQRYQLVPVSEPSFNQQIYEPHGTRGRSTNVSPETGNISIPNNGTIYVTSQNPNAAENVNGIRYATAPDVRFEDDTYGTTRFEYGQHHSNAHNTHSASGDDIKIELIRNQHAIHGKIHIEDAHQPPPQSDAKIQYTNLDVSPQSYYSISADGYPTGNGFTYISTTQNKDYIYPGSPNTVLYKGDPSLASAFNSRYNVPLSQHQGIIYDSNSIQQSGSPVSQVYTNCKPESGYWHQTSEYNVNAPFGQTIVLDNGSDYIANGASWQLQPDSYDPQLVTTGAPSECVNCSTSQSVYWRRVDGHPMCHQCTFTRQSRPKISKNKPPVTQANRRSGVICANCKTSTTTLWRRNNHGEPVCNACGLYFKLHNVNRPQSMKKDGIQTRKRKPKYTMQSKPKTSPISEKMLPPLFPSQIHLQPDMKIPILQAHQSAQNQMLAHAHNQSPSQHSQEVHINASGQGSNEHYISVAPTHPTHLPHVSNLSRHINTSVASIDGHGSNTKLTSVITCTGTPDQIEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01351313;
90% Identity
-
80% Identity
-