Basic Information

Insect: Sitodiplosis mosellana
Gene Symbol: Hr39
Assembly: GCA_009176505.1
Location: VUAH01000005.1:1829395-1844966[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.6 5.9e+03 -3.6 7.2 60 160 33 137 16 162 0.47

2 5 2 1.9e+04 -5.8 11.4 43 169 117 248 104 270 0.60

3 5 0.24 2.3e+03 -2.2 14.8 31 125 276 377 265 404 0.65

4 5 3.6e-08 0.00035 20.2 0.1 1 20 516 535 516 539 0.94

5 5 3.1e-76 3e-72 244.4 1.5 164 408 570 833 547 833 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.6	5.9e+03	-3.6	7.2	60	160	33	137	16	162	0.47
2	5	2	1.9e+04	-5.8	11.4	43	169	117	248	104	270	0.60
3	5	0.24	2.3e+03	-2.2	14.8	31	125	276	377	265	404	0.65
4	5	3.6e-08	0.00035	20.2	0.1	1	20	516	535	516	539	0.94
5	5	3.1e-76	3e-72	244.4	1.5	164	408	570	833	547	833	0.87

Sequence Information

Coding Sequence: atgtctACATCGGGTGGAGGTTGTTCGAGTGATTTAAGCGGCATTCGCCCAAATATATCGGTCACAAGTATCAATTGTCCATCGTTGGCTGTCAACAGTATTGATCtaagcaatgaaaaaacgacaaatgcAAATAGTCTATCGAATAGTAGTGAAGCGCAGCACAATGTGAACAGTAAATCGAATAGTTTTTGTAATAGCTTAGTAAGCGATGCATCACCTTCACCAGCATCGGtacatcagcagcagcagcagttgAATAATAATCCGCATTTTTATGGAAACGGTAGCATTCGAATTGCCGTGCCAAAAATGGAAGAATCCGATGAATCTGAGACTGAACTATCGCAAATTGAGAATGCAGCAACGACCAGCACGACAACAGCACCAACGGCGGTAAGCATGCGGGCGAGTAACAATAACAAGAGTACACCACGGCCGATGTCATGGGAGGGCGAACTGTCCGAAAATGAGGATCAAATGGAAACCGATGCAAACTcaaaaccaccaccaccaccaccaccaacaacaaccacaaatAACAACGAAGTGGCAATGAATGCCATTTCGTATGCAACAAATGGAAATGCCGACAAATCAATTGTGAAACCTCGTGCGGTCATCACATCGGAGCTAAATGACAATACGgagaaaatgattgatttggATACAAAAGTTAAAATTAAACCGGAATACAATAGTTTGGCTCCGaacacgacgacgacgacgaccacgacGACAACGCCCGATGCAAATCATGCGATGATTACAATGGATGCAAATAAACGCTTTCCATTTGACATGTCCAATatgaaattcgaaacgaaTTTGCAGTCGCAACACATTGCCAATCAGTTTGCAACACAACAATCGAcccagcagcagcagcagcagcagcagcagaatgATATCAATTCGTCCACATCGATGATGCGATCGAAAGCAAACAATATTTTACCGACAAATCCGAGCCCCGATTCAGCTATTCATTCGGTGTATACCCATAGTTCACCGAGCCAATCACCATTAACGTCACGCCACACACCGTACACACCGTCATTGAGCCGAAACAATAGCGATGCCTCGTACAGCAGTTGCTATTCGTACAGTTCGGAGTTTAGTCCAACGCATTCGCCAATTCAAGGCCGACACAATATGTATGCCGGTGGCAATTTCAATGGATCCCCATTGCATCACTCAGTATTGTACAAACCGATGATGGACGGAAATGACAACGCCAAGACCTTACAGCATCAACAgtcaaacgaagaaaatatcCTGGAACCCGAAATCATTCCATCGGCTGGCATCTCACGACAGCAACTCATTAACAGTCCATGCCCGATTTGCGGTGATAAAATCTCCGGTTTCCATTATGGCATCTTCTCGTGTGAATCGTGCAAAGGATTTTTCAAACGAACCGttcaaaatcgaaagaatTACGTTTGCTTGCGCGGCGGACCCTGTCCCATATCGATTGCAACGCGGAAAAAGTGCCCGGCGTGCCGGTTTGAGAAGTGCTTACAACGTGGAATGAAATTGGAGGCAATTCGCGAAGATCGCACCCGCGGCGGTCGTTCAACATATCAATGCTCGTACACTTTGCCAATGCTCAGTCCATCGCTGGTTGATGGCACTTTGTTAATTTCCAACAACCGAACGAAGGCATCCAACCAACAAGACAATCTGACCGGCATTGGCAGTGCATCCAATCAACAGACCATTCCCACATTGCTGCAAGAAATTATGGACGTTGAACACCTATGGAAGTTTAGCGAAgccgaaataaataaactgaatcaaaatcaattgtctaTGAATGAGATCAGTCGAAATGATGGTGCTGGCACATCATCGGCCACATTGGCCACGAACCCATTATTGGCTGGCCTCGCCAATAGCGAAGACACCAGTCCCGATTTAATTGCAAATCTCTGCAACGTTGCAGATCATCGACTctataaaattgtaaaatggTGCAAAAGTTTGCCATTGTTCAAGAATATCTCGATTGACgatcaaatttgtttgttaatCAATTCGTGGTGCGAACTCTTGCTTTTCTCGTGCTGCTTCCGATCGATTTCGTCACCTGGCGAAATTCGCATCTCGCAAGGCAAATCAATCAACTTGGAACAGGCCAGATCTAGTGGTCTTCAGGCTTGCATTGAACGAATGTTGAATCTAACGGACCACTTGAGACGACTTCGTGTTGATAAGTACGAGTATGTGGCAATGAAAGTGATTGTTCTTCTTCAATCAGACACATCTGatttaagagaaacagaacAAGTACGCGGATGCCAAGAAAAAGCATTGCATGCACTGCAAACCTACACGTTAGCCCATTATCCTGATGCGCCATCAAAGTTTGGTGAACTACTTTTGCGAATACCCGAATTGCAACGAACTTGTCAGGTCGGCAAAGAAATGTTGACAATCAAATCAAAGGACGGTGCCGAGTTCAATCTTCTGCTGGAATTGCTGCGCGGTGAACATTGA
Protein Sequence: MSTSGGGCSSDLSGIRPNISVTSINCPSLAVNSIDLSNEKTTNANSLSNSSEAQHNVNSKSNSFCNSLVSDASPSPASVHQQQQQLNNNPHFYGNGSIRIAVPKMEESDESETELSQIENAATTSTTTAPTAVSMRASNNNKSTPRPMSWEGELSENEDQMETDANSKPPPPPPPTTTTNNNEVAMNAISYATNGNADKSIVKPRAVITSELNDNTEKMIDLDTKVKIKPEYNSLAPNTTTTTTTTTTPDANHAMITMDANKRFPFDMSNMKFETNLQSQHIANQFATQQSTQQQQQQQQQNDINSSTSMMRSKANNILPTNPSPDSAIHSVYTHSSPSQSPLTSRHTPYTPSLSRNNSDASYSSCYSYSSEFSPTHSPIQGRHNMYAGGNFNGSPLHHSVLYKPMMDGNDNAKTLQHQQSNEENILEPEIIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGGPCPISIATRKKCPACRFEKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPMLSPSLVDGTLLISNNRTKASNQQDNLTGIGSASNQQTIPTLLQEIMDVEHLWKFSEAEINKLNQNQLSMNEISRNDGAGTSSATLATNPLLAGLANSEDTSPDLIANLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSISSPGEIRISQGKSINLEQARSSGLQACIERMLNLTDHLRRLRVDKYEYVAMKVIVLLQSDTSDLRETEQVRGCQEKALHALQTYTLAHYPDAPSKFGELLLRIPELQRTCQVGKEMLTIKSKDGAEFNLLLELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01288172;
90% Identity: iTF_01350811;
80% Identity: iTF_01350811;