Smos000069.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- CSRNP3
- Assembly
- GCA_009176505.1
- Location
- VUAH01000020.1:356424-360675[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-92 5.3e-88 294.7 14.6 2 218 227 472 226 472 0.85
Sequence Information
- Coding Sequence
- ATGCTAAGGcctttcaaatcatttttaaataatttacaaaaaaatgctGAGACTCTTTTCGGatcgaaaaataattcacCAGACATGAAttcaaacgaagaagaagaggagatCGCTACAGATAGCATGTACAGTATTGATGATTTAGATCCATTAGCTGATCCACTAGCATTGGACGATGAACTTGGTGACCGGTCGCTTGAGGTAGCCAGCGGTTATGTGTCAAGGAATTCAAATCTTAATCTTAGCGATTTAGATAGCTCGGACGATGGGCAAATAATACTCGTAGATGTAAATAGTTTGAAAAACTCCTTCACAATTCCCGTTCCTTATGCCGATAATACATTGGAAATTGCCACTACAACGCATCCGCCAAGCGAATCGAGAAGAGACACAAATCAAAGCGGGCTAATTTGTGAAACGACTATAAACCATGATGTTGGCATCGGTGATGTTTCGTTTGATCCGATTGGTTTGACACTGGACGATGAAATTACGGAAGAAGTTGAAGGGTCTCGAAGTGATGGCTCCGATTCGGGCTTAGGTATAGAATTATGTGCGGGATTATTAGCCGATAAAACAACTGCTTCACCAAATGGTGCAGTGCATCCATCACGAAGTAATTTAAAACGAAGATCGAACACGAGCGACCAAATCGATGTTATTGACGCAAagaaaccaaaacgaaatatcCAATTTACAGATGTAACCGTTTACTACTTTCCACGAATTCAAGGGTTCACATGCGTTCCATCACAGGGGGGCTGCACTCTTGGCATGAGTTCAAAGCATATCGATGAAAAGTCATTCACCCTGAATGAACATATAGCTGAACAGAAGCGAATACACCGGCAGCAAATGCTCGAAAGAAGTCCCCGGCCGCCGTCGTCACTAAGCACAAGTTCGATGAATGCAATACTACCGAGCCCAGCGCTGGTAGCCACAAATCAATTAACTGTACCTACAACAGCCACAACTACGACAACCACAACGTCTGGCGATGACCGATCGCGATCATCGACAGAAGAATCTGATAGCGAAGAAGACATTTTAAGTGATAATAGCAGCTCTGAATTAGACACCGAAACAATTGGATTTTTACAACCAGTTTCACAAAAACAGCGGAGGGCCTTACTCAAAGCGGCTGGCGTACGGGAAATCGCCTCAagcgaaaagaatgaatgccGTGACATACGAGCGTCTCGTGAAGTCTGCGGCTGCAGCTGTAGAGACTACTGTGACCCGGAAACATGCTTGTGTAGTCAGTCGGGAATCAAATGTCAGGTGGATCGCGCCAGTTTCCCGTGCGGATGTTCGACCGATGGCTGCGGAAATGTGTATGGTCGCCTTGAATTCAATCCGAAAAGAGTGCGGACGCACTTTATACACACAATCATGCGACTGGAGCTGgagaagaaacagaagaaatcGGACAAACAAAATACACTGCACACGTACGATGGACGGCTGCGGCTTCGTGAAAGTGATGATGAAAGTTCCGTGGTTGATTCCGGGGGCATGAACACCCGATTGATCACCTACAATCCTGCGAATAACATTTTATACCCAACGACAACGATGCAATCGACGTCGGGCGTTGCAATGAATAGCCACTATACAGCAAACGAAATAGATGGTTCTAGTCGAAATTGTGCGGTTGCATCGATGGCCGAAACACCATTGGATTTGCATTATGCATTTAGAAATGATTATTCGGTGGATCCAACGCAAGCAAACTATTCGCTAATGTATCCGAACTCCAGCTACTATACAAGCAGTACGCCGACAGCGTTCACTGACTTCAACACAATGGGCATCTCAAATCAATCGTCGCTAATTCCGAGCTATTCAAACTATTCAAACAATATTCCATACAGTAGTTTGATGAGCAGCATTCAAACTCCCACAACTGTTCCAATTGCCACAACCGATGGTGTTTCGTCGTGCTCGAGCTACATATCGACTGGAGATCCAACCAACGATTGTGTTCACAATGGTTCTCTGTTTGATAATCATGTGACCGAAGACTTTTTGAGCATAAACCAAACAGCCAGCAGTTCCAAAGATAACAAAGCGATCGATCAGTTTAGCGGAAAGTATAACGACTACGTGAACGATTCGAGCAAACTGTTGGATGTGACTTCCGTGTCGGCAGTAgatttaaattgtttgctcaACGACGAAAATCTCACGGGACACCCAATTGACCATCCAGTGCCATCGACAACAATAAATGGAACAGTTGGTGCAACTACTTCCACAGAACCACATGGCTCTTACATGCGGTTCGAGTCGGACTATGCAAATAAACTGAACGCTACACACAACTACAGTCTAACGAATGAGTCAAGTGGCAGCGCCGCTAGCGCCGTCATTGTGGACGACAAATCAAATGAGCTATTCCAAAAAGATTCAGTGCTCACCACTTAA
- Protein Sequence
- MLRPFKSFLNNLQKNAETLFGSKNNSPDMNSNEEEEEIATDSMYSIDDLDPLADPLALDDELGDRSLEVASGYVSRNSNLNLSDLDSSDDGQIILVDVNSLKNSFTIPVPYADNTLEIATTTHPPSESRRDTNQSGLICETTINHDVGIGDVSFDPIGLTLDDEITEEVEGSRSDGSDSGLGIELCAGLLADKTTASPNGAVHPSRSNLKRRSNTSDQIDVIDAKKPKRNIQFTDVTVYYFPRIQGFTCVPSQGGCTLGMSSKHIDEKSFTLNEHIAEQKRIHRQQMLERSPRPPSSLSTSSMNAILPSPALVATNQLTVPTTATTTTTTTSGDDRSRSSTEESDSEEDILSDNSSSELDTETIGFLQPVSQKQRRALLKAAGVREIASSEKNECRDIRASREVCGCSCRDYCDPETCLCSQSGIKCQVDRASFPCGCSTDGCGNVYGRLEFNPKRVRTHFIHTIMRLELEKKQKKSDKQNTLHTYDGRLRLRESDDESSVVDSGGMNTRLITYNPANNILYPTTTMQSTSGVAMNSHYTANEIDGSSRNCAVASMAETPLDLHYAFRNDYSVDPTQANYSLMYPNSSYYTSSTPTAFTDFNTMGISNQSSLIPSYSNYSNNIPYSSLMSSIQTPTTVPIATTDGVSSCSSYISTGDPTNDCVHNGSLFDNHVTEDFLSINQTASSSKDNKAIDQFSGKYNDYVNDSSKLLDVTSVSAVDLNCLLNDENLTGHPIDHPVPSTTINGTVGATTSTEPHGSYMRFESDYANKLNATHNYSLTNESSGSAASAVIVDDKSNELFQKDSVLTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00367211;
- 90% Identity
- -
- 80% Identity
- -