Cnas002380.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- CSRNP3
- Assembly
- GCA_009176525.2
- Location
- NW:1640071-1645747[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-29 4.9e-25 88.4 0.1 2 66 223 287 222 307 0.92 2 2 8.1e-67 1.1e-62 211.4 10.7 69 218 327 477 309 477 0.85
Sequence Information
- Coding Sequence
- ATGCTAAGGcctttcaaatcatttttaaataatttacaaaaaaatgctgaaactTTTTTCGGatcgaaaaataatttaccaGATATGAATTCAAACGAAGACGAAGAGGAGATTGCTACTGATAGCATGTACAGTATTGATGAATTAGATCCATTGGCAGATCCATTAGCATTGGACGATGAACTTGGTGAAGTGGGCACCAGTTATGCGACGCGAAATGCGAATCTTAGCGATTTAGATAGCTCAGATGATGGACAGATAATACTCGTAGATGTAAATAGTTTGAAAAATTCGTTCACAATTCCCGTTACGTATGCCGATAATACAATCGAAATAGCCACATCAACATCAAATGTGTCGGCAACAACACGAAGGGAACCAACAGTGAATGAGTTAAATTGTGAGACGAATGCCACCCATGACGTTGGCATTGGTGATGTGTCATTTGATCAAATTGGCTTAACGTTAGACGATGAAATTACCGAAGAAGTTGAAGGCTCTCGAAGTGATGGCTCTGATTCGGGCTTGGGGTTGGAATTATGCGCTGGGCTACTGGCCGACAAGACATCTGCTTCGCCAAATGGTGCAGTGTGTCCATCACGAAGTAACTTAAAACGGCGATCACACCCCAGTGACCACATCGATGTTGTTGATGCACcaaaaaaactgaaacgaaatattcaatttaccGATGTAACCGTATTTTACTTCCCACGAATCCAAGGTTTTACATGTGTACCGTCACAAGGTGGTTGTACACTTGGAATGACCTCAAAGCATATCGATGAGAAATCATTTACATTAAACGAACACATAGCCGAACAGAAGCGTATACATCGTCAACAAATGCTTGAGCGCAGCCCACGGCCGCCGTCATCGCTAAGCACAAGTTCATTAAATGCATTGCTACCGAATTCAGTGCTGATGACGCCAAGTCAATTACAAAATCAATTAACTGTACCAACGGCAACAGCAACGACCACATTAACAACAACCACCACAACAACGTCGACTGATGATCGATCACGTTCATCGACCGAAGAGTCTGATAGCGAAGAAGACATTTTAAGTGATAATAGCAGCTCCGAATTAGACACCGaaacaattggatttttaCAACCAGTTTCACAAAAGCAACGGAGAGCCTTACTCAAAGCGGCTGGTGTTCATGAAATAGCCTCTAGCGAAAAGAATGAATGCCGTGATATCAGAGCGTCTAGAGAAATTTGCGGTTGTAGTTGTAGAGATTATTGTGATCCAGAAACGTGTTTGTGCAGTCAATCGGGAATTAAGTGTCAGGTGGATCGAGCGAGTTTTCCATGTGGATGTTCGACGGATGGTTGCGGAAATGTATACGGTCGTCTTGAATTCAATCCAAAACGTGTCCGAACGCATTTCATACATACAATCATGCGACTGGAATTagagaagaaacaaaagaaatcgGACAAACAGAATACATTGCACACATATGACGGACGGTTACGGCTTCGTGAAAGTGATGACGGAGACTCGGTGATTGATTCCGGCGGAATGAATACCCGTTTGATCACATATAATCctgcaaataatattttatatccAACAACAACGATGCAATCGTCTTCGGGTGTTACAATTAACAGCCATTATACACCGAATGAACTGGATGATACTAGTCGAAATTGTGCGGTTACATCAATGGCCGAAACACCATTGGATTTACATTATGCATTTCGAAATGATTATACAGTGGATCCAACACAAGCCAGCTACTCGTTAATGTATCCGAATTCGGGCTATTATACAAGCAGTGCAGCCACAACATTTACAGACTTCAATGCGATGGCCATCTCAAATCAATCATCATTAATTCCTAGttatacaaattattcaacaaatattccATACAATGGCTTAATTAATGGCCCAACAACGCCAACAACACCAATTCCAAACGGTCCAAATGGTATTTCGTCATGCTCAAATTACGGTGCGTCCACAACGGATTGTGTTCATAATAATGGTTCTTTGTTTGATAATCATGTGACTGAAGACTTTTTGAGCATAAACCAAACGAATGCCACCAATGTCATTTCCAAAGATTGTAAAAATGTTGTCGATCAGTTTGACGGCAAGTACAATGAGTACGTGAACGACATTACGTCGGTGTCAGCGgttgatttaaattgtttattgaacGATGATAATCTAGCGGCGCATCAAATTGATTCAGTGCCATCGACAAGTGTTGATGTTGTCGGTACGGGTGCCACTACTACATCGTCCAATGATTCACATGCCTATATGAGATTCGAATCGGACTATGCAAACAAACTAAATGCCACACATAATTATAGTCTAACAGATGATTCAAATGTCACCGCAGATGAGAAATCAAACGAACTATTCCAAAAAGATTCAGTGCTGACCACTTAA
- Protein Sequence
- MLRPFKSFLNNLQKNAETFFGSKNNLPDMNSNEDEEEIATDSMYSIDELDPLADPLALDDELGEVGTSYATRNANLSDLDSSDDGQIILVDVNSLKNSFTIPVTYADNTIEIATSTSNVSATTRREPTVNELNCETNATHDVGIGDVSFDQIGLTLDDEITEEVEGSRSDGSDSGLGLELCAGLLADKTSASPNGAVCPSRSNLKRRSHPSDHIDVVDAPKKLKRNIQFTDVTVFYFPRIQGFTCVPSQGGCTLGMTSKHIDEKSFTLNEHIAEQKRIHRQQMLERSPRPPSSLSTSSLNALLPNSVLMTPSQLQNQLTVPTATATTTLTTTTTTTSTDDRSRSSTEESDSEEDILSDNSSSELDTETIGFLQPVSQKQRRALLKAAGVHEIASSEKNECRDIRASREICGCSCRDYCDPETCLCSQSGIKCQVDRASFPCGCSTDGCGNVYGRLEFNPKRVRTHFIHTIMRLELEKKQKKSDKQNTLHTYDGRLRLRESDDGDSVIDSGGMNTRLITYNPANNILYPTTTMQSSSGVTINSHYTPNELDDTSRNCAVTSMAETPLDLHYAFRNDYTVDPTQASYSLMYPNSGYYTSSAATTFTDFNAMAISNQSSLIPSYTNYSTNIPYNGLINGPTTPTTPIPNGPNGISSCSNYGASTTDCVHNNGSLFDNHVTEDFLSINQTNATNVISKDCKNVVDQFDGKYNEYVNDITSVSAVDLNCLLNDDNLAAHQIDSVPSTSVDVVGTGATTTSSNDSHAYMRFESDYANKLNATHNYSLTDDSNVTADEKSNELFQKDSVLTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01350691;
- 90% Identity
- -
- 80% Identity
- -