Smos017173.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- Dnajc1
- Assembly
- GCA_009176505.1
- Location
- VUAH01000003.1:3323315-3325687[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0043 5.9 7.2 0.0 5 43 24 63 21 65 0.83 2 3 0.00011 0.16 12.2 0.0 4 38 304 341 301 342 0.87 3 3 3.6e-10 4.9e-07 29.9 0.1 3 44 385 431 383 433 0.88
Sequence Information
- Coding Sequence
- ATGAAATTGATAGGAGTTTTAGGTTTATTGACATTAAtcgcattgaatgttgacatTGTGTCGGCATGGGACCAAGACGAGATAGAAATATACGATTTGGTTGAAGAAATTGGTATTGAGAAAAACTTTTACACCATCCTTAAAGTTGAACAGACAGCCACATCAGCTGAAATTCGTAAAGCATTCCGTCAATTATCGGTTGTACTGCATCCAGACAAAAATGACGCTGAAGATGCCAATGTTCAGTTCCGGAATTTAGTTTCGGTTTATGAAGTCCTCAAAGATCCATCCAAACGTGAAAAGTACAATAAAGTGCTGAAAGATGGTTTGCCCGATTGGAGATCAGCCATGTATTATTATCGGCGCTATCGCAAAATGGGTCTGGCCGAAATGGTCGGTTTGgtatttgtcattttcacCATTGGACAGTATATTGTTGCTTGGGCTGTTTATGCCGAAAAGAAATACACAGCGGAAGAGATTTTCGGCTCAAAACTCCgaaaattgcagaaaaaaaataaaactgctGTGAACATAGATGAATTGTTGAATCAAATACCGACACCGAGCATAAAGAATACGCTTCCATTTCAAATAGTTCGCGGTGTTTGGAACACTCCACGGACAATCAAGAATTTCTTCACCGATATTAACGAGTACAAAGAGCAAATGCGTGAGGAAAAACGAagAGAGGCTGAGGAAGCTGAACAACAGCGATTACTTGAAGAAGAGTTGGCCAAAGAAAAGGAAGCAAAGAAAGAAGGAATGCGAAAGCGAAAGCCCGCATTCAAAGCCACGGAGAAGACCGATGAAGAGCTGAAGGgatattcaaaattgaatatgaatttgaCAAAAGGAACCGGTGTGAAGGCAGTCGAGGCAAAGGCGCCAGTGTTGAGTGGTGGTTTTTGGACGGATGATGATTTGTCCGAGTTAACGCGGCTCACGAAAAAGTATCCAAATGGCACTCTGTCCCGATGGGAAGTGATCGCTGGACATATGAATCGATCTGTGCACGAAGTGACGTTCATGGCGGCCAGACTAAAAGAGCCAGGCCAGCGACCTGACAGTGTAGCCGAAGCGATCGTTCAAGAAGCTacgaagaaagcgaaaaaaattgcaaccGATGACAAAGCTCAACCAGCAGAGGCCGTATGGTCACAGGAGCAACAGAAACTTCTCGAAACTGCCATAGTTAAGTACCCAAAGACGACTGCTGGCGATCGATGGCAAAAGATCGCAAACACGGTACcaggaaaaacgaaagaagagtGTTTGGCTCGCTACAAGTATCTTGTACAAAAAGTCAAAGAACAGAAATTGAAAGAGGCATCAACGCAGCTAGAGGCAGAagaaaaggtagaaaaatCGGAAACAGAAAGAGTTGAAAGTGTGGAGCAGccagaggaagaagaagaagaagtcaAAGATGAAGCCGAAGAAGAACCCGAACCAGAACCAGTTGCTGAAAAGAAAAGTGGCGGCAAACcacgaaacaaacgaaaagaacGCAAAAAGCGAATGGAGTTCTCAAGCGATGAAGAAGATAACTATAGTTATGAgtaa
- Protein Sequence
- MKLIGVLGLLTLIALNVDIVSAWDQDEIEIYDLVEEIGIEKNFYTILKVEQTATSAEIRKAFRQLSVVLHPDKNDAEDANVQFRNLVSVYEVLKDPSKREKYNKVLKDGLPDWRSAMYYYRRYRKMGLAEMVGLVFVIFTIGQYIVAWAVYAEKKYTAEEIFGSKLRKLQKKNKTAVNIDELLNQIPTPSIKNTLPFQIVRGVWNTPRTIKNFFTDINEYKEQMREEKRREAEEAEQQRLLEEELAKEKEAKKEGMRKRKPAFKATEKTDEELKGYSKLNMNLTKGTGVKAVEAKAPVLSGGFWTDDDLSELTRLTKKYPNGTLSRWEVIAGHMNRSVHEVTFMAARLKEPGQRPDSVAEAIVQEATKKAKKIATDDKAQPAEAVWSQEQQKLLETAIVKYPKTTAGDRWQKIANTVPGKTKEECLARYKYLVQKVKEQKLKEASTQLEAEEKVEKSETERVESVEQPEEEEEEVKDEAEEEPEPEPVAEKKSGGKPRNKRKERKKRMEFSSDEEDNYSYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00367160;
- 90% Identity
- -
- 80% Identity
- -