Cnas002856.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- DNAJC1
- Assembly
- GCA_009176525.2
- Location
- NW:729563-731724[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.22 2.2e+02 1.7 0.0 5 29 24 47 21 63 0.67 2 3 1.1e-05 0.011 15.5 0.0 4 38 301 338 298 339 0.87 3 3 1.1e-10 1.1e-07 31.5 0.1 3 44 383 429 381 431 0.88
Sequence Information
- Coding Sequence
- ATGAAACTGATTGGGCTATTTGGTTTTTTAACACTGATTGCACTGAATGTCGCGAATGTGTCAGCATGGGACCAAGAAGAGCTGGAAATATTCGATTTGGTTGaagaaatcaatcaaaatttttaTACGATTCTCAAAGTCGACCAGCAAGCAACGTCGGCTGAAATTCGTAAAGCATTCCGCAGTTTATCGGTCGTTTTGCATCCGGATAAAAATGACGCCGAAGATGCCAACGTTCAATTCCGGAATTTGGTATCCGTTTATGAAGTACTCAAAGATACAGCCAAACGAGAAAAATACAATAAGGTACTTAAAGATGGTTTGCCAGATTGGAGATCAGCTTTGTACTATTATCGACGTTATCGCAAGATGGGATTGGCCGAAATGATTGGAttggtttttgtcatttttaccATTGGACAGTATATAGTTTCTTGGGCGGTCTATGCCGAAAAAAAGTATACAGCTGAATCACTGTTCGGCTCAAAACTTcgaaaattgcaaaagaaaaacaaaagtgcTGTGAATATAGATGAGCTATTGAATCAAATACCAACACCAAGTATAAAAAATACACttccatttcaaattgtcCGAGGTGTTTGGAACACCCCACGTGCGATTAAAGATTTCTTCACCGATATGCATGACTATAAACAACAGATACTCGAAGAAAAACGAAGAGAGGCCGAAGAAGCTGAGCAACAACGGCAATTAGAAGAGGAATTTGCGAGAGCAAAAGAGGCAAAAAAAGAGGGTATGCGAAAGCGCAAGCCAGTATTCACCGCCAAAGAAAAGACCGATGAAGAATTGAAGGGTTATGCTCAGTTGAACGTGGACATGGCGAAAGGAAAGGTCAAAGCAGTTGAAACCAAGGCGCCAGTATTAAGTGGTGGTTTTTGGACGGatgatgatttgaatgaattaacGCGTTTGACCAAGAAATATCCAAATGGAACACTGTCTCGATGGGATGTCATTGCTGAGCACATGAATCGTTCGGTGCAAGAGGTGACATTTATGGCGGCAAAAATGAAAGAGCCAAGCTATCGCCAAACAGACAGTGTTGCCGAATCGATTGTACAAGAGGCCacaaagaaagtgaaaaaagttGCAGGCGATGTGAAAACTGCACCTGCCGAAGTTGTCTGGACGCAGGAGCAACAAAAACTTTTGGAAACAGCCATAGTTAAGTATCCAAAAACAACCGCCGGTGATCGATGGCAGAAAATCGCAAACACTGTACCCGgtaaaacgaaagaagaatgTTTGGCGCGATACAAGTATCTTGTGCAAAAGTTGAAAGAgcagaaacaaaaagaagcagaaaacgaagaaaaggTACAAAAATCAGAAGACAACGAAGTAGATAGAGtagaaaatgtcgaaaattcaGAAAAAGATGCGGAACCAGAGCCAGAGCCAGAGCCCGAATtagtagaagaagaagaagaaccgTTTGTGGCAAAGAAAACCGGCGGCAAGCCtcgaaacaaacgaaaagaacgaaaaaagcGCATGGATTTTTCAAGCGATGAAGAAGATAATTTGGATTATGAATAA
- Protein Sequence
- MKLIGLFGFLTLIALNVANVSAWDQEELEIFDLVEEINQNFYTILKVDQQATSAEIRKAFRSLSVVLHPDKNDAEDANVQFRNLVSVYEVLKDTAKREKYNKVLKDGLPDWRSALYYYRRYRKMGLAEMIGLVFVIFTIGQYIVSWAVYAEKKYTAESLFGSKLRKLQKKNKSAVNIDELLNQIPTPSIKNTLPFQIVRGVWNTPRAIKDFFTDMHDYKQQILEEKRREAEEAEQQRQLEEEFARAKEAKKEGMRKRKPVFTAKEKTDEELKGYAQLNVDMAKGKVKAVETKAPVLSGGFWTDDDLNELTRLTKKYPNGTLSRWDVIAEHMNRSVQEVTFMAAKMKEPSYRQTDSVAESIVQEATKKVKKVAGDVKTAPAEVVWTQEQQKLLETAIVKYPKTTAGDRWQKIANTVPGKTKEECLARYKYLVQKLKEQKQKEAENEEKVQKSEDNEVDRVENVENSEKDAEPEPEPEPELVEEEEEPFVAKKTGGKPRNKRKERKKRMDFSSDEEDNLDYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01350629; iTF_01288064;
- 90% Identity
- -
- 80% Identity
- -