Smos015512.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- relb
- Assembly
- GCA_009176505.1
- Location
- VUAH01006196.1:8556216-8558314[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-40 1.6e-36 125.9 0.0 1 169 55 231 55 231 0.90 2 2 0.48 1.5e+03 -0.9 0.0 101 143 438 475 436 486 0.71
Sequence Information
- Coding Sequence
- ATGATAAGAGCCGAGAAAATCTATTGTTTAATCCTTCGAAAAGCGTCGTCCATTACTGCTAAACTGCCGCAATGTTTTTGGGTAAAAACccaaaaattaaaacatttcgGCAACGtGAAGATACATGTTATTGTTCCAACAATGGCCACCAATGCACCTTACTTGAAAATCGTCGAACAACCAACTGGGAAATCGTACCGCTTTCGTTATGAAAGCGAAGGTCGAAACAGTGGCTCAATTTTTGGTGTAAATTCAACCAAAGACAAACAAACCTATCCAACCATTGAACTTGGCAATGTCACCGGAAAGATTGGTATACGCATAACTTGCGTTACGAACAGTGATAACGGCACACCGAAgCAGCATCCGCACAAgttgtcaataaaaatgaaaaataaactaagTGGAGAAGTATTGCTAAAATATAACGTCACACAGAAGGAAACGATCAAAATTAGAGATGTCGGAGTTGTGTTTGTCAAAAAATGTCGTATTCAAGAGTCGTTGATGCTTCGAATGAATGCGAATATCGATCCAACGGGAGGTGGCTGGGATTACATTGAGAGACCGCATCTCTTTGAATTACACTGTGTGCGCTTGTGTTTCGAAGCGTTTCTTTACAATGGAGCTGACACCGATGAAGACAATGTTGTACCAATCGGTTATGTGCTTTCAGACCCAATTATGGATAAAAGGTACACTGGTTCGTTAAAAATCGTCGAAATGAGCTCAACCAGATCATCCGCTTCTGGtggtgaaaaaatgataatactGTGTAGCAAAGTGAAGCTCGAGGATATATCGGTGTTATTCTATGAGAAAGATGCCGATGGAAAAGTCATTTGGAAAGAAGAAATCAACCATAAAACGTCCGAATTTATGAAGCTTCATTATCAGTTGGCGATTACATTAAGAACGCCAAAGTACCGTGATCTGAATATCGAAGGAGCGCGTAAGGTATTTGTTCAACTTATGCGGCCATCGGATAATGAATACAGTGAACCACAATCATTTGCATTCGTAGCAAATGCACAAAGTATGTATAATTTCGATGAAGACTGTGGACAAAAGTCAAAACGTAAGAAACCAAATGGAATTATGCCGGAAAATAATCAACATGCACAccacaatcaaatcaatacaATTGTAAGCCCACCGAAAATAAAGAATGACCATCATCACGTAGTGACCAATGACAATCAACCGAATGTCACAATGGCTGAAAATGAAAGGGGATCGAAACCAGCAGCCAACAAATCGCCTAATAATCGTTCAGTGTATGAAATTCACATTTCGAAGTGTGAGAATACGGTTACATCCACAGACATCACCGAACATATTACGGAGCACACAAAAGCTACCCTCGATCTGTTTGAGGTCGAGCAACTGAAAAGCTCAAATATTACGGATCCACACGTCTGTTTCAAGATATCAACTTGCAgtaaacaaatttatgatgaGATAATGAATGAGGATTTATGGGCGCCTAGATTTTGTGCGCGTGAATTCCGGCTGAGCGATCAAACTAAGGCAAGCAATGAAAAACACTCAATTCGttcgattttaaatgaatcatATGGCGAACAACCACACTGGAAACGATGTATCATTAATAAGTATTCGATGGATTTTTATTGCCACAGCAAACTGAATTTTGAGACagaaaatgtcatttgttaa
- Protein Sequence
- MIRAEKIYCLILRKASSITAKLPQCFWVKTQKLKHFGNVKIHVIVPTMATNAPYLKIVEQPTGKSYRFRYESEGRNSGSIFGVNSTKDKQTYPTIELGNVTGKIGIRITCVTNSDNGTPKQHPHKLSIKMKNKLSGEVLLKYNVTQKETIKIRDVGVVFVKKCRIQESLMLRMNANIDPTGGGWDYIERPHLFELHCVRLCFEAFLYNGADTDEDNVVPIGYVLSDPIMDKRYTGSLKIVEMSSTRSSASGGEKMIILCSKVKLEDISVLFYEKDADGKVIWKEEINHKTSEFMKLHYQLAITLRTPKYRDLNIEGARKVFVQLMRPSDNEYSEPQSFAFVANAQSMYNFDEDCGQKSKRKKPNGIMPENNQHAHHNQINTIVSPPKIKNDHHHVVTNDNQPNVTMAENERGSKPAANKSPNNRSVYEIHISKCENTVTSTDITEHITEHTKATLDLFEVEQLKSSNITDPHVCFKISTCSKQIYDEIMNEDLWAPRFCAREFRLSDQTKASNEKHSIRSILNESYGEQPHWKRCIINKYSMDFYCHSKLNFETENVIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -