Smos000634.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- dl
- Assembly
- GCA_009176505.1
- Location
- VUAH01006190.1:17665-19847[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-43 2.4e-39 135.1 0.3 1 169 7 182 7 182 0.86 2 2 1.9 6.2e+03 -2.9 0.2 118 135 462 479 452 482 0.52
Sequence Information
- Coding Sequence
- ATGGAAAACAAGCCATACTTGGAAATTGTTGAACAACCAGCGGAAAAATCCTTTCGATTTCGTTATGAAAGTGAAGGTCGATTGAGTGGTTCGATTCTTGGTGTAAATGCAACAAGAGACGTTCCCAGCTATCCAACAATCAAAGTTCATAATTACAGTGGAATGGTTGCTATACGCATATCTTGTGTAACCAACGAACAAAGCGCGAAAGCAACACCCAGACAGCATCCGCACAAAGTGTCAACCAAGGAGGTGCGAAAAAGTGGAGAAGCTTTTATCGTGCGTAATGTGGGAAATTTGGGAGAGATTCAAATCAAGGATATTGGTATTGTGTTTGTCAAAAAGCAAGATATTAAAGAATCGTTAGAACATCGAAAGAGTATGAATATCGATCCAACGAAAGGTGGATGGAGTTACATATCAAGACCGCAACACATTGATTTGCATTGTGTGCGTCTATGTTTTGAGGCGTTCAAGTATAAGCCTAACGAAAAAACCCAATATGAACCAATCGGATATGTCCTATCCACACCAATTATGGATAAAAAATCCAACGGATCGTTGAAAATTACGGAAATGAGCACGCTTAGAGCATCAGTCGTGGGTGGTGATAAGATAATTTTGCTGTGTGACAAGGTGAAACGGGAAGACATATCCGTTGTATTTTATGAAGAAGATGACAATCAGAAAATAATCTGGAAAGAAGAGATCCACTACAAAAATTCTGCGTCAATGAAGGTTCACCACCAGTAtgcgatttcatttcaaacgcCCAAGTACAGGGAATTCGATATTGGAGAACCGCAGAAAGTATTTGTTCAACTGTATCGACCATCAGATAATGAGCTCAGCGAACCACTTCAATTCGAATTTCTGCCCAATAGTGCACACAGTGTTCAACTACGGCgtaaaaaacagaaaaaaatgaacgatacGGCTACGAAGGAACTGAATTCGTATGCAGCCTCATTGAAAAAGGCGGAAAAGCCCAAATTTGTGCCAAATATACAAGTTGGAAATATTTTGACTGGAGTTAACAGGAATAACGCAGTAGAACGGCCAGCAAATCCACCGACCCTCATCAATTTGGCGgaagaaaacaaagagaatATTCAAATGCCAATGAACAATCAACTGCCGAACACATTCCAGCAAGCATCGGTTCAGTCGCAGTATCAGCGACCAATGGCCAATACAAACCCATATGATGAACAATACAATTATCCATGTGGCACATATTCGAACACGCCGAACTATCCATCGTACTATTATACACCAATGGCTCAGCATCAAAATGTCAATAGTCATTTTGGTGAGCCATCAATTGCCCAAGCACCGTCGTACAATGCACGGCCAATATTGCTACCGAATATAtaccaacagcaacagcaacagcaacagcagcaacaacaacaacaacagcacgcCCAAGCAAATCTATATGCAAATGGTCAACAGCAAGGAATGGGGTATATGGATCCAACGATAACTACAACTACAAACCATCCGATGAACTCGGCCATGAATTGCATACCATTGACTTACAACAATGACACTAACAAAACCGTTGAATATTCCATCCATAGTAACCAAGTAATGAACGACAATTTGGAGCCAAACCGTACAAATTTGTCCGAATTGGAACGGGGTTTAAGTAAGTCAGAGCTATTGAATTTCACCACGGACGTCGAAGAAAACGACAACATGGGGGAGCTGTCCGAAAGTTTGAGTAGCATTAGCTTAAACAATgctaattttaataaattttga
- Protein Sequence
- MENKPYLEIVEQPAEKSFRFRYESEGRLSGSILGVNATRDVPSYPTIKVHNYSGMVAIRISCVTNEQSAKATPRQHPHKVSTKEVRKSGEAFIVRNVGNLGEIQIKDIGIVFVKKQDIKESLEHRKSMNIDPTKGGWSYISRPQHIDLHCVRLCFEAFKYKPNEKTQYEPIGYVLSTPIMDKKSNGSLKITEMSTLRASVVGGDKIILLCDKVKREDISVVFYEEDDNQKIIWKEEIHYKNSASMKVHHQYAISFQTPKYREFDIGEPQKVFVQLYRPSDNELSEPLQFEFLPNSAHSVQLRRKKQKKMNDTATKELNSYAASLKKAEKPKFVPNIQVGNILTGVNRNNAVERPANPPTLINLAEENKENIQMPMNNQLPNTFQQASVQSQYQRPMANTNPYDEQYNYPCGTYSNTPNYPSYYYTPMAQHQNVNSHFGEPSIAQAPSYNARPILLPNIYQQQQQQQQQQQQQQQHAQANLYANGQQQGMGYMDPTITTTTNHPMNSAMNCIPLTYNNDTNKTVEYSIHSNQVMNDNLEPNRTNLSELERGLSKSELLNFTTDVEENDNMGELSESLSSISLNNANFNKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -