Smos013535.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- spn-F
- Assembly
- GCA_009176505.1
- Location
- VUAH01006225.1:10499844-10501552[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-06 0.012 15.9 0.1 16 48 25 57 17 61 0.88 2 2 0.00024 2.3 8.5 0.5 13 34 68 89 67 108 0.81
Sequence Information
- Coding Sequence
- ATGGATTCGAATAAAAGTGACACAGTTCAGACGAAAGAGCAACTTGCATCACACTATGCATTGCATGTTGCGTTGCAAACGATGAAGGAACGATGTTTGGCACTACAGCAGCGTCTAACTACCGTCGAACAGGAGAATTCCACATTACGCAAACAATGTGGACAGGATCAACCGAATCTCCGTGGCAACAATATGGACGATCGCAGCGAAATTGAAGTGTTACGCGAACAAGTGGGTGAATTGACGCGACAAAAGTATCAATTGACTGAACACATTGGAATGGTAGCGATGGAGAATCGACAATTATGGTTGCGCCTATCGAAACTCACCAAAGACAATCAATCGTTGGGTGTTTcgttgaataaaatcaaaaccacaTTAACCGAAACTACGGCTGGCCACCAGAATTTGATCCGGTCCAAGACATTCACACAAAACTCACCGAACCCGATTCTACGGCAAAAAATGCAGATGCAAGACGGCACCAGTACACACGACAATGGCAAAGAAATGGAAGACGTTAGCTTGGAAGAGATTTCATTGAAAGACTATACAGATCAACCGAATGTACAGGGCGATCCAAATGCACCGCACACAAATACCGAATTCCAAAGTCGTGTCGTTGCCAATTCAATGGGTTTCGGTTACCTGAACGACGAAAGCATTAACACCATTTTGTCGAATGACACCAAGAAATGTATGGACAGCATGGTGGATATTAAGAAGGAGCTATTGCGGCAACAAAGTGATTTGAAAGTGGCTTTGAGCGGTCTGCGCCAAAGAAGAGtGTTGGAGCTGTGTTTGAACTGCAAAAATCAGTCAATGAAAAAGGCGAATACGGCCGATAAGAATCTTGGCACCGATGAAGTGCAGGAATTTTATCAAGAGCATATCGATGGTCCAGCCACATTTCGACGTCGTCAATCGTCGGAGAATGATGCCGAAATTACGGAAATCATCGGTGATAACGCTGCATTTATCCCAATCAAACCGGACAATCAGAGTGATGCGGTCGATATtacacaacagaaaaaaattgccgatTGCATGGATAAAATGTGTCCAATGTGCGGAAAAGTCTATTCAAATGTATCGTCATTCGAACTATTCCAAGACCATGTTGAATCACATTTCATCGACGACACCGATTTGGATTTAAGTGTTGAGAAGAACTTTGAATTCGTTTCGAATACGGTTGGCCAATTTTGA
- Protein Sequence
- MDSNKSDTVQTKEQLASHYALHVALQTMKERCLALQQRLTTVEQENSTLRKQCGQDQPNLRGNNMDDRSEIEVLREQVGELTRQKYQLTEHIGMVAMENRQLWLRLSKLTKDNQSLGVSLNKIKTTLTETTAGHQNLIRSKTFTQNSPNPILRQKMQMQDGTSTHDNGKEMEDVSLEEISLKDYTDQPNVQGDPNAPHTNTEFQSRVVANSMGFGYLNDESINTILSNDTKKCMDSMVDIKKELLRQQSDLKVALSGLRQRRVLELCLNCKNQSMKKANTADKNLGTDEVQEFYQEHIDGPATFRRRQSSENDAEITEIIGDNAAFIPIKPDNQSDAVDITQQKKIADCMDKMCPMCGKVYSNVSSFELFQDHVESHFIDDTDLDLSVEKNFEFVSNTVGQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -