Ster006598.1
Basic Information
- Insect
- Sisyra terminalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_958496175.1
- Location
- OY292275.1:48216829-48221469[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2.1e+04 -7.8 5.6 15 19 147 151 146 151 0.81 2 18 0.0026 26 5.1 1.9 4 12 182 190 181 190 0.94 3 18 1e-07 0.0011 19.2 15.0 1 19 196 213 196 213 0.99 4 18 2 2e+04 -4.1 0.6 5 8 241 244 238 245 0.57 5 18 3.9e-07 0.004 17.3 15.6 1 19 248 266 248 266 0.93 6 18 0.43 4.4e+03 -2.0 1.8 5 10 290 295 290 295 0.96 7 18 2e-06 0.02 15.1 13.8 1 19 301 319 301 319 0.94 8 18 1.8e-05 0.19 12.0 10.6 1 18 354 371 354 372 0.97 9 18 1.9 2e+04 -4.1 0.7 1 4 381 384 381 384 0.94 10 18 1.1e-05 0.11 12.7 12.6 3 18 408 423 406 424 0.92 11 18 4e-09 4.1e-05 23.7 11.4 1 18 433 450 433 451 0.98 12 18 0.58 6e+03 -2.4 1.0 5 10 479 484 479 484 0.94 13 18 0.00059 6.1 7.2 4.6 9 19 499 509 497 509 0.89 14 18 0.041 4.2e+02 1.3 6.3 1 12 519 529 519 529 0.89 15 18 2 2.1e+04 -6.9 4.5 14 18 558 562 558 562 0.86 16 18 0.0013 13 6.1 4.7 1 12 599 610 599 610 0.97 17 18 0.0011 11 6.3 18.8 3 18 640 655 639 656 0.94 18 18 3e-07 0.0031 17.7 11.0 1 16 699 713 699 719 0.87
Sequence Information
- Coding Sequence
- ATGAGTCATAGCACTAAGCAATCGGAAAGCTCAAAGAATTCCAACAgcaaaaatgaagaaaagttCTTAGCGGTTCGTGAACAGATTCaacgaaatattgaaaaacataCCAGCAATTATGAATCTTCATCCGAAGAAGAAGAATTAGAAACGGAAAACGTTTTTGCTACGGTTACCAAACAGTTTTCAAAGTTGGATGAGAATGATTTGGGACGTACAAAGGCGTATCTTGAAGAAGCTTTGACTTCGGGGGCATTAGTTTGTTTGATTTGTATTGGAAGTGTTAAAAGAATCGAGGCGgTATGGAATTGTTCTGaatgtttttgtatatttcactTAATTTGTATTCAACGATGGTCCAAAGACAGTCTTGTTCAACAAAAACGCGTTGACGAAGACCAAAATGTAACACCtggaaagaaaatttataactgGTGTTGTCCTAAGTGTCGTCAGGAATACTCTCCGAGTGAAATTCCTAAGAGTTATGAATGCTTTTGTGGTAAAACAGAAAATCCAGAATATCAATCGTTTCTGCCGCCACATTCGTGTGGTGAAATTTGCCACAAAGCACTCAAGCCCGAGTGTGGACATAAATGTTTGCTTCTTTGTCATCCTGGTCCATGTCCTGCCTGTCCTCAAATGATTGACTGGCCTTGTTATTGCAAGAAAGTTCATCGAGTACAACGTTGCTGCAAGAAAAATTGGTCTTGTGGCTCAAAATGCCAAAAACTTTTAGCTTGTAAACGACATAAATGCTCCAAAAATTGTCACGATGGAGAATGTCCTCCGTGTCCCGAAACAAGTCAACAGAAATGCAATTGCGGTAACGAAACAACCTTGCGAGAATGCGCCGAACCAAGATGGACttgtaaaaaaGTTTGCAATAGACTGCTTGATTGCAAAAATCATCAATGTGCGACTATTTGTCATGAGGGTAAATGTGAACCGTGTCCTTTGACAGGGGACAGACGATGTCCTTGTGGAAAGCAAATATTCCAATTGCCTTGTACCGAAGAGGTGCCCACGTGTGGAGACACGTGTGCTAAAATGTTAGAGTGCGGCATTCATCAATGTTTAGAGCGATGCCATCGAAACAAATGCGGAAATTGCTTAGAAGTCATACCAAAAACTTGTCGATGTGGAACCCATGTCAAAGAACTGCCTTGTCAAAAAGAATATTTCTGTGACACTAAATGCAAACAGATGAAGGATTGCTTAATTCATCTTTGCAATCGTAAAtgTTGCGATGGGAACTGTCCTCCATGTGAGAAACCTTGTGGACGAACTTTACGTTGTGGAATTCACAAATGTCCTTCAGCTTGCCATCGCGGCCCATGCTTTCCTTGTGCATTAACAGTCAAAGTCACTTGTCGTTGTggtgaaacaaaaattttcgttCAATGCGGTCGTCAACGGAAAACTCGTCCTCCTAAGTGTAACAAGTTGTGCAAAATACCTCCAGATTGTCATCATTCACAGCGTGAAAAACATCGTTGTCATTTCGGCGATTGTGCACCTTGCCAACAAATTTGCAACAAAACCCGTGATTCTTGTTCTCATTTATGTCCAGAAAAATGCCACTCGGCAATTTTAGTTAAAATCAAGGAAAACGAAATTCCATCGATGCCGTGGGAAAAGAAAGCGCCTCAAATCCTGCGAAAAGCATTTCCATGTCCTGATTGTATCGTTCCTGTTTCGGTCACTTGCCTCGGGAAACATGAAATCTCCAAATGGCCTTGTCACCTTGCGAGAATAGGATCATGTGGCCGTAAATGCGGAAGAAAATTAGCTTGTGGAAATCATATTTGCTCTCTTGATTGTCACGAAGTGCTTGGATCCGTAGACCCAAACTTGGCTGGAATAAATTGCGAAAAATGTGAGCTAGCATGTCGCAAACCACGTTCTGAAGGGTGCATCCACCCCTGCCCCAAAGAATGTCATCCCGGCGATTGCCCCAAATGTCATCAAACTCTTCGAGTCAAATGTTATTGCGGTCTTCAACAAGTCTACATCAAATGTAGCGATAACGAAATCCCCGAAAAGCGTGACACCATGAAATCATGCGGCAACCAATGCACAAAAACAtataaatgTGGACATCGGTGTCGTGCAGTTTGTCACAGTGGTGATTGTCCCGATGAAGACAAAtgtcagaaaaaagtaaaattaacatGTCCCTGTAAAAGCGTGAAAAAAGAATTTCCTTGCGATGTAGCCCGTCAAGGCAAAACTGTAGAATGTGATGATAACTGCAGAAAGAAAATTACAGATGCTGAAAAGGAGCGTGAATTGTACGAACAACGAttgaaagaagaagaaattagaaaaaatcaacGTGAATTGGAAGAATTCAATAAGAAATTCCAATCGAGGAAAAAACATCGGGAACGCAAAAGAGCATTGGATGTTGAGGAAGTTTCGTTGTTGCAACGTTATAAATATGCAATTATAGCATTTATTTTTGCgattttatgtattttgatagCTGTACTAAATTTATAA
- Protein Sequence
- MSHSTKQSESSKNSNSKNEEKFLAVREQIQRNIEKHTSNYESSSEEEELETENVFATVTKQFSKLDENDLGRTKAYLEEALTSGALVCLICIGSVKRIEAVWNCSECFCIFHLICIQRWSKDSLVQQKRVDEDQNVTPGKKIYNWCCPKCRQEYSPSEIPKSYECFCGKTENPEYQSFLPPHSCGEICHKALKPECGHKCLLLCHPGPCPACPQMIDWPCYCKKVHRVQRCCKKNWSCGSKCQKLLACKRHKCSKNCHDGECPPCPETSQQKCNCGNETTLRECAEPRWTCKKVCNRLLDCKNHQCATICHEGKCEPCPLTGDRRCPCGKQIFQLPCTEEVPTCGDTCAKMLECGIHQCLERCHRNKCGNCLEVIPKTCRCGTHVKELPCQKEYFCDTKCKQMKDCLIHLCNRKCCDGNCPPCEKPCGRTLRCGIHKCPSACHRGPCFPCALTVKVTCRCGETKIFVQCGRQRKTRPPKCNKLCKIPPDCHHSQREKHRCHFGDCAPCQQICNKTRDSCSHLCPEKCHSAILVKIKENEIPSMPWEKKAPQILRKAFPCPDCIVPVSVTCLGKHEISKWPCHLARIGSCGRKCGRKLACGNHICSLDCHEVLGSVDPNLAGINCEKCELACRKPRSEGCIHPCPKECHPGDCPKCHQTLRVKCYCGLQQVYIKCSDNEIPEKRDTMKSCGNQCTKTYKCGHRCRAVCHSGDCPDEDKCQKKVKLTCPCKSVKKEFPCDVARQGKTVECDDNCRKKITDAEKERELYEQRLKEEEIRKNQRELEEFNKKFQSRKKHRERKRALDVEEVSLLQRYKYAIIAFIFAILCILIAVLNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349302;
- 90% Identity
- -
- 80% Identity
- -