Snig006842.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sisyra nigra
Gene Symbol
nfxl1
Assembly
GCA_958496155.1
Location
OY292314.1:51533222-51540171[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2 2.1e+04 -7.8 5.6 15 19 147 151 146 151 0.81
2 16 0.066 6.9e+02 0.6 0.4 4 10 182 188 181 188 0.96
3 16 3.7e-06 0.038 14.2 16.1 3 19 197 213 196 213 0.94
4 16 2.4e-08 0.00025 21.2 14.5 1 19 248 266 248 266 0.96
5 16 0.17 1.8e+03 -0.7 1.9 5 10 290 295 290 295 0.96
6 16 5e-10 5.2e-06 26.6 14.2 1 19 301 319 301 319 0.99
7 16 1.8e-05 0.19 12.0 11.8 1 18 354 371 354 372 0.97
8 16 1.9 2e+04 -4.1 0.7 1 4 381 384 381 384 0.94
9 16 5.1e-06 0.053 13.8 11.7 3 18 408 423 406 424 0.91
10 16 6.2e-09 6.4e-05 23.1 10.0 1 18 433 450 433 451 0.98
11 16 0.00059 6.2 7.2 4.6 9 19 499 509 497 509 0.89
12 16 1.1 1.1e+04 -3.3 6.0 4 12 521 529 519 529 0.86
13 16 2 2.1e+04 -6.9 4.5 14 18 558 562 558 562 0.86
14 16 0.0017 18 5.7 5.0 1 12 599 610 599 610 0.97
15 16 0.071 7.4e+02 0.5 16.4 3 18 640 655 639 656 0.94
16 16 1.4e-06 0.015 15.5 11.4 1 16 699 713 699 719 0.87

Sequence Information

Coding Sequence
ATGAGTAACGGGCCAAAACAACCACGTAAATCGACGTCATTTCACGGCAAAAACGAGGAAAAGTTTCTAGCTCACCGTGAACAGATTcagaaaaatatcgaaaaattgaCGAGTAACTATGAATCGTCGTCGGAAGAGGAAGAATTAGAAACAGAAAACGTATTCGCGGCCGTAACCCAacaattttccaaattaaacgAGAATGATTTGGGTCGTACCAAGACGTTTCTCGAGGAAACCTTAACATCTGGAGCTGTTGTTTGTCTGATTTGTATCGGCAGTGTTAAGCGAGTCGAACCAATTTGGGATTGTTCCGAATGTTTTTGTATTTTCCACTTGGTCTGTATTCAACGCTGGTCCAAAGACAGTATCGTTCATCAAAAACGGGTTGATGAAGATCAAAATGTTGCCTCCAAGAAAAAGATTTACACTTGGTGCTGTCCTAAGTGTCGTCAAGAATATGCCCCCAATGAAATTCCTGATGTTTACCGGTGTTTTTGTGGGAAAGTTGAAAATCCCCAGCAACAACATTTCTTACCTCCCCATTCATGTGGGGAGGTCTGCGAGAAGCCATTGAAACCCGAATGTGAGCATCAATGCACTTTGCTTTGTCATCCAGGACCGTGTCCAACATGCCCTCAGATGATAGACTGGCCGTGTTTTTGTGGAAAAGATCATCGTGTACAACGTTGCTGCAAACGTAAATGGGGTTGTGATGCCCAGTGTAAAAAACTTCTGGCCTGTAATCGACACAAGTGTGTTAAAATATGTCACGATGGTCCTTGTCCTCCATGTCCCGAAACAAGCCTACAAAAATGTAACTGTGGCAATGAAACCACACTGCGAGAATGTGCCGAACCGAGATGGACTTGCCAAAAGgtttgtaATAAAATGCTTGGTTGTGGAAATCATCGATGTACCATTGTGTGTCATGAGGGTGAATGCCAACCTTGTCCACTAACGGGAGAAAGGCGATGTCCGTGTGGAAAGCAAGTGTTCGAGTTGCCTTGCACTGAAGAAACGCCAACATGTGGCGATACTTGCGGAAAATTGTTGGAATGTGGCAATCATCAATGCTTAGAACGATGTCATCGAAACAAATGTGGCAATtgtttagaAGTGATACCCAAAACTTGTCGATGTGGAACCCATGTCAAAGAGTTGCCTTGCCAAAAAGAATTCTTATGCGACACCAAGTGCAAGCAAATGAAAGACTGCTTCATTCATCTTTGTAATCGTAAAtgttgCGATGGTAATTGTCCTCCATGTGAAAAACCTTGTGGAAGAACCCTACGGTGCGGCGTCCACAAATGTGCCTCGGCATGCCATCGTGGTCCATGTTTTCCATGTGCCCTAAACGTGAAAGTCACTTGTCGCTGTGGCGAAACCAAGATCTTCGTCCAATGCGGTCGCCAAAGAAAAACTCGTCCTCCCAAATGTAAAAAGCAGTGCAAaattcCCCCGGATTGTCATCACGCTCAACGTGAAAAGCATCGTTGTCATTTTGGTGATTGCGCTCCTTGCCAACAAATTTGTAACAAGTCACGCGACTCCTGTCCTCATCCATGTCCTATTAAGTGTCACTCGGCGATTTTAGTTAAAATCACTGATACGGAAGCACCGTCAATGCCTTGGGAAAAGAAAGCACCGCAGATTTTACGCCAATCATTTCCATGTCCGGATTGTATCGTTCCTGTTTCGGTCACATGCTTAGGACTACATGAAACTTCTGAGTGGCCGTGCCACCAAGCTAAAGTGAGCTGTTGTGGTCGACAATGTGGTCGAAGTTTATCCTGTGGTAACCATTTGTGTACACTGGATTGCCACGAAGTGGTAGGAGCCAAAGATTCATTTTCAGCCGGAACAAATTGTGAACGTTGCGAGTTAATGTGTCGCAAACCACGTCCCGATGGATGTATTCATCCCTGTCCCAAAGCTTGTCACACGGACAACTGTCCCAAATGCCATCAAACACTCCGGGTCAAGTGCTACTGCGGCCTGCAACAAGTCTACATCCAATGCAGCGACAATGAAATTCCAGAAAAACGGGACACGTTAAAAACGTGTGGAAACCAATGCACAAAATCTtataaaTGTGGTCATCGTTGTCGAGCAATTTGTCACAGTGGTGAATGTCCAGATGAAGAAAAATGTCAGAAAAAAGTCAAGCTCACATGTCCATGTCGGGGTGTTAAAAAAGAGTATCCGTGCGATGTGGCTAGGCAAGGCCACGTCGTAGTGGAATGCGAcgaaaattgtaagaaaaaaatcaaagatgttGAGAAAGAACGTCAACTGCTTGAGCAGAGGATGAAAGAAGAGGAGATTAGACGAAATCAACGCGAGCTTGAAGAGTTTAACAAAAAGTTTCAGTCGAAGAAAAAGCATCGAGAACGTAAACGAGCTTTGGATGTTGAGGAAGTCTCAATGTTTCaacgttataaatattttctgttaGCTTTTATTGCTTTATTGTTATGTGTTTGTATTGCAATAGTTGCAAATTGA
Protein Sequence
MSNGPKQPRKSTSFHGKNEEKFLAHREQIQKNIEKLTSNYESSSEEEELETENVFAAVTQQFSKLNENDLGRTKTFLEETLTSGAVVCLICIGSVKRVEPIWDCSECFCIFHLVCIQRWSKDSIVHQKRVDEDQNVASKKKIYTWCCPKCRQEYAPNEIPDVYRCFCGKVENPQQQHFLPPHSCGEVCEKPLKPECEHQCTLLCHPGPCPTCPQMIDWPCFCGKDHRVQRCCKRKWGCDAQCKKLLACNRHKCVKICHDGPCPPCPETSLQKCNCGNETTLRECAEPRWTCQKVCNKMLGCGNHRCTIVCHEGECQPCPLTGERRCPCGKQVFELPCTEETPTCGDTCGKLLECGNHQCLERCHRNKCGNCLEVIPKTCRCGTHVKELPCQKEFLCDTKCKQMKDCFIHLCNRKCCDGNCPPCEKPCGRTLRCGVHKCASACHRGPCFPCALNVKVTCRCGETKIFVQCGRQRKTRPPKCKKQCKIPPDCHHAQREKHRCHFGDCAPCQQICNKSRDSCPHPCPIKCHSAILVKITDTEAPSMPWEKKAPQILRQSFPCPDCIVPVSVTCLGLHETSEWPCHQAKVSCCGRQCGRSLSCGNHLCTLDCHEVVGAKDSFSAGTNCERCELMCRKPRPDGCIHPCPKACHTDNCPKCHQTLRVKCYCGLQQVYIQCSDNEIPEKRDTLKTCGNQCTKSYKCGHRCRAICHSGECPDEEKCQKKVKLTCPCRGVKKEYPCDVARQGHVVVECDENCKKKIKDVEKERQLLEQRMKEEEIRRNQRELEEFNKKFQSKKKHRERKRALDVEEVSMFQRYKYFLLAFIALLLCVCIAIVAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01350149;
90% Identity
-
80% Identity
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