Basic Information

Insect: Sisyra terminalis
Gene Symbol: RREB1
Assembly: GCA_958496175.1
Location: OY292279.1:5033568-5047694[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0021 0.14 12.8 0.3 1 23 124 146 124 146 0.96

2 16 0.00064 0.042 14.5 0.3 1 23 162 184 162 184 0.97

3 16 0.00016 0.01 16.4 4.6 1 23 190 212 190 212 0.99

4 16 0.52 34 5.3 0.1 1 20 310 330 310 334 0.70

5 16 0.24 16 6.4 6.4 2 23 340 362 339 363 0.94

6 16 0.02 1.3 9.8 0.3 1 22 428 449 428 449 0.96

7 16 0.098 6.5 7.6 0.1 1 23 598 620 598 620 0.96

8 16 1.4e-05 0.00096 19.7 0.7 1 23 630 652 630 652 0.99

9 16 0.0011 0.071 13.8 3.1 1 23 658 681 658 681 0.97

10 16 0.00092 0.06 14.0 2.8 1 23 1136 1159 1136 1159 0.96

11 16 7.5e-05 0.0049 17.4 1.4 2 23 1421 1442 1420 1442 0.97

12 16 0.47 31 5.5 5.9 1 23 1448 1471 1448 1471 0.96

13 16 0.14 9.1 7.2 4.0 1 20 1514 1534 1514 1538 0.94

14 16 7.7 5.1e+02 1.7 0.6 1 23 1606 1629 1606 1629 0.86

15 16 0.021 1.4 9.7 0.5 3 23 1684 1704 1682 1704 0.93

16 16 0.017 1.1 10.0 5.9 1 23 1710 1732 1710 1732 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0021	0.14	12.8	0.3	1	23	124	146	124	146	0.96
2	16	0.00064	0.042	14.5	0.3	1	23	162	184	162	184	0.97
3	16	0.00016	0.01	16.4	4.6	1	23	190	212	190	212	0.99
4	16	0.52	34	5.3	0.1	1	20	310	330	310	334	0.70
5	16	0.24	16	6.4	6.4	2	23	340	362	339	363	0.94
6	16	0.02	1.3	9.8	0.3	1	22	428	449	428	449	0.96
7	16	0.098	6.5	7.6	0.1	1	23	598	620	598	620	0.96
8	16	1.4e-05	0.00096	19.7	0.7	1	23	630	652	630	652	0.99
9	16	0.0011	0.071	13.8	3.1	1	23	658	681	658	681	0.97
10	16	0.00092	0.06	14.0	2.8	1	23	1136	1159	1136	1159	0.96
11	16	7.5e-05	0.0049	17.4	1.4	2	23	1421	1442	1420	1442	0.97
12	16	0.47	31	5.5	5.9	1	23	1448	1471	1448	1471	0.96
13	16	0.14	9.1	7.2	4.0	1	20	1514	1534	1514	1538	0.94
14	16	7.7	5.1e+02	1.7	0.6	1	23	1606	1629	1606	1629	0.86
15	16	0.021	1.4	9.7	0.5	3	23	1684	1704	1682	1704	0.93
16	16	0.017	1.1	10.0	5.9	1	23	1710	1732	1710	1732	0.98

Sequence Information

Coding Sequence: ATGCAAGATCTGTTTGGGGGAGTGAACGCATCAACGACAATCGCATCAACCACTGCACCAACTGCATCTGCATTCACCACGGATTCATCCACCATACCGGAATCCTGTGCCCAACAATCAGGATCATCGTCACCCCCGCAATCGATCGTTTCATGCCAATCAGaGATGGAAATGGAGGAAACTACGACGGCGAGTAAGGAGGAGTACCAAATTTCGACGAGGAGCCACCAACGGTTGTCGAAACCGGCGATAATTCGACGGAATCCTCCGTGTCGGGAACCAAGTGAGGAGAAATCGGGAGATCGTGACGATGAGGATCTGGACTCCGATGGGAAGCCGAGTAGTAGTTGTGATGAAGAAAAGAAGACATATTTGTGTCCGATTTGTGATATTCAATTGGATGATCAACATGAATTTACGCTGCACATTCGTTCACATAACAATGATAACAACAATGATAGTTCAAATCCAAATCTGAGCCAATTTGAGTGTCGGATTTGTTTTAAAGTGTTGAGCTCCAGCTCGAGTTTAGATCGACACGTTTTGGTTCACAGCAAAGAACGTCCATTCCGGTGTCGTCTTTGTTCGGTTACTTTTACGACCAATGGAAATATGCATCGACACATGCGAAAACACAATGTGAATTCAACGAATTCGGTGAATTCTTCGTCACCAAACGAGTCGGATGCTGCCAGCCATAGCGATAGTAGTTCGTCTTCGACGGCTGCCAGCGGCTCGACGCAGTCGACACCCCGAAAATCACTACGTCGACGCCGCTACGAACACAACAACAATAACTATTCCAAAAAACGTAAAGTTGATTCTCTACTCAACGAAACCGATCTCGACACCAACCAAAACAATCGTAGACGTCTGAAAAAATCAGTCAACAACAACAACGAGAATGAAGACTCCGAAGGCCAAAAGTACCAGTGTCCGATTTGCGGACGTGAAGATTTCGCGTCTCTCAACGTCTTCGAAACGCATCTCGAAGAATCCCATCCTCAATATCAAATCAAATGCCACCAATGCAATCTCTCGTTCAAAAATCACCGCGTCTTAAATCTCCACCGATTCATGGTCCACCATTCGGCCGACTCAAACAACACCGGCTCAACATCTCCGCCAAATCCCACCGACTCGAAATCCCCAAAATCTGAAGGCATAATCGGCTTTCGGGATTTAACTTTTGTCGATTTTTCAAGTGAAAAATTCCCAATTATCGCCAAAACAGTGTGCGAACAATCGTTACACAAAGCCGACAAAAACGATGATTTGATATTCGAATGTGAAAAGTGCACTCGCGCTTTTCCCTGTGCCAGCGCTTTGGAAATCCATCAGAAAACTTGCAACAACTACAATGTTAACGACGAAGACGACCACAAAAATTCATCCAGCGAAGATGACCTAAAACGGGAAGATTTCTTCGCCGGGCTTGACCTCCAAAATAAATCGTCATCGCAAGACGGCTTCGCCAAATCTCCGATTCAATCACGACCATCGATATTAACTCCTCCAAATTCAAGAAAACTACACGACTATTTAACCAAACCGCATATTGCGGACAACACAAAAGATCTTGCTGATATCCAATCGATAATTTCAGTGACTTCCACGCAAAGTTTACTTCAGCAATTAACCGCTCAAAAGTCGGGAACACCAATGAATCTACCGATTCCGGCTCAAATCACACCGCCCGACTCGGAAGCTCGAAACAACGAAAATCAAAACGAAGAAGAACTGCAAGATCAATTTGCGGCTGAATTCCGAAAGATGAAATTACGTGGAGAATTTCCGTGCCGGTTATGTTCGGCCGTTTTTCCAAATTTGCGTGCATTAAAGGGCCACAATCGGGCTCATTTAAGTGGAGCAGGATCGAATGGACCGTATCGGTGTAATATGTGTCCACATTCTTCGGTCGATAAAGCCGCTTTGGTAAGGCATATGCGTACGCATAACGGAGACCGACCTTACGAATGTTCATTGTGTAATTATGCTTTTACCACGAAGGCAAATTGTGAAAGACATTTACGAAATCGTCATGGAAAAGTAACTCGAGAAGATGTGAAACGTGCCATAATTTACCATCCATCGGAAGATCCAACCAATGATGAAGCCGCCGccagtttaaataaaatgtttaacacTACTCCAACTGGCCGAGGTAGTGCTTCACTGTTACCACTAACGCCAACCGTTCCTGGAGAAGACATCCACAAAATTTACATGTCCGATGTAAAACGATCGCTAATTTTCCCAACCCCTCCTCTAACCGGTGATACACCACCGACCACAAAACTTTCCCTCACCGATATCCGATCAGTAATTTCCAAACTTCCGATTCCCAATCAAGCAGACGTCCCCCTATCTTTGTACAAGGATGAATCGTATTTAATCTCAAACCTCAAAAGCATCAATAACATAAAAGAACGAATCTATCCGGAAGAAAGTCAAACCGGATTAACAATTCCAAAAATTCAAGTCAAAAATGTCAACGAATTAAAATCAGTTCCTGATTACAATTCTTCGGATTCCGAAGAGGAACAATTTAGTCGATCAAATGTTATAACCACTCCGTTATCGCATTATTCACGGAATCCAGTTCCGATACAACCACCCGCACCTATTGATTTATCAATGGATGTTTTGGATTTAAGCAAGAAAAAGCGCGATCCAACTCCGGAACCCACATCACCGGTGCCACCTCCGTCTAGTCATGCCGATGAATCTGAGGAAGATCAACCGCATGATTTCACCAAAAAAACCCTAAATGAAACCATACATAAGGCTAGATCTCAATCACCTCCACTACCATTACATTCCCTCCCGATTAATCAACCAAATATCTTCGATAAAACTCAACAACTACTTCTTGCTCAACAGTTTTTTAAGAACAACGCAATTAACTCCAATCTATATGCAGCACAAATTCAACACTTGTACAACAATCGAGACGGGGTTCTAACAGGACCACCACCTCCTCCCGGCACGGCTTCTCAATTCCCGTTCGGAATCAATCCCTATTTATTCCAGCCACATCCATTCTTAACACCGACAACTTCTCCACAAGATTTTCAAGAAATCAAAGAGAGAATCCAAAAGGAAATAATTCGAGGATTACAAATGAGTGGTGGTGGTCTTATTATGGATCAACTTGCGTCGGAACGTCTACAAGCATTCCAGAAACACTCTGAACAAATGACCGACACAAAATTCAATGCTCACATGAAGCCGGATGAAAGTAAATCGTTGGATTCCCTTGAAACTTTAGTAACGAATAATAAAACTTCattgaaaatgaatgaaaatatcatTTCGGCAACTCCAAATTCAGTGAAAATGGTAATTAAAAACGGTGTTTTAATGCCGAAACAAAAACAACGGCGTTATCGCACCGAAAGACCATTTTCTTGTGAACATTGTTCTGCCCGTTTTACTCTTCGTTCAAACATGGAACGACACATTAAACAACAACATCCACAATTTTGGTCGCAACGACAACGCTCTAATTTAACCGTAGGTTTACCAGGTCGCAAACCATCAATATCTTCAATCCCAAATTCGCAACAATTCGAGTCGAAACCTCCGCAAATTTCGAATATTCTCAGCAATTCTGTGGAAAAAAATCTACCAAATCCACTTAGCGTGcgacaaaatgaaaaaaaatcacctcTGTTGATTAACGATCAAGTCAAATATGCCATTTTGGCGCAGCAATTAAAACAGTTGCAGAATACTGATAAGAAAGAGAGTTCAATGAATGATGAGGACGACGATGAGGAGCGGAGTTCATTGATCATTGATGAAAATTCGCAACAAAGTACACAATCGACCGATGTGGAAAAGCAGAGGAAAACTGAAAGTTTGGAACAGAAATTGGCCGAGCTACGAATGAACAAGGAAAAACTATTGAAAGAAGAATCTAAAACTCTCGAATCCCGAAAAAATGACGAAAATTCCAAGAACAACGAAATCTCCGATCTCGTTCCGGTTTCTCAACTGTTAGATAACGCTGCTCAAATTCCGTTTGGTGATTATTTTCGAAGAGAAACCGAAGATGTGGAAATGCCAACCGATGATGAGGAAGAAGAAGGATTGGTGGCCAGTGGGAGTACTAGCGAAGGAAACGTGTCGGGAAGCGATGGAAATAAgTCTGAAAGTGATACAACGAAGAAAGGAATTGTTAAAGCAAAATCTGAGGCAGTTCCGTCGATGACGGGAAAGAAGAAATCGGCATATTCGCTAGCACCGAATCGGGTCACTTGTCCGTATTGTCATCGCAAATTTCCTTGGTCGTCGTCGTTGCGACGTCATATTTTGACCCATACTGGACAAAAACCGTTCAAGTGTTTGCATTGTCCTTTACTGTTTACAACGAAATCAAATTGTGATCGTCATTTACTTCGAAAACATGGAAATATGTTGAATAATAATAGCAATGGAACTGGTACAACTGTTGCACTAAATGCATCTCCAACTTTGAGTGAATCAAACGTTAATAGTTCCAATTATTTGATGAGAAATGTCCCGGAACGTCCATATAAATGTTCTAGCTGTCCAAGTTCAACATTTTCGACGTTgagcaatttaaaaaaacacatgtcATGCAAACATAATACCAGCAGCGGAAATGCTTCATCACATAGTCGCTCACATTCGCCTGATGGAATCAAATCCGCTACCTACGACAGCCATTCTTCGGAAGACGAGTACCAGAAAAAAGATGGATGGGAACAGCAAATTAATTTTGGTAGTTCCGTGGAACATACGGGAAATGTACCACTTCCAGTAAGTGTTTCCACGTCGGATTTACCGTTTAAGTGTCATTTGTGCGAAGGATCTTATGGGGAGCGACAAGAAGCTTTAGATCACATCAAAGATTACCACGCGACAGAATATGAGCTTTTGTTGAGTAAAGGAGCTTTGGAAAGTCAACAAGACACGGAACATGGACAAAACGGTCCCAATCCGGAACACAATAGTGACGAGCCCGAAGAGCAAGTGAATCTTCGTGGTAAATTTCCCGACTATGCCAACAGGAAGGTGATGTGTGCGTTTTGTATGCGAAGATTTTGGTCGGCGGAAGATCTGCGTCGTCACATGCGCACGCATACCGGCGAGCGTCCATTTTCCTGTGATGTATGTCGACGCCGATTTACCCTTAAACATTCAATGTTGCGACATCGCAAAAAGCACGGCGATTTAACCGAAGATGGCTTGAAAGTCAATGCACAAGACGTAGGTAATTTAGACGAACAACACGTACAACGAAAAACGCAGCAACGACGCCGACGTTCGTCCAGCAGTAGTTTAGTTCCTACCGAAAAAGAAGAAGATGACGCCGGCGATAACGGGTGCAACGACGACGGAGATCTAATCGGAAACTTGTTGGGTATCCAGGACAGTTCTATCATTGACAAAGTGCTTCGTTCCTCGGCTGACGACGCCGCCAAACTTCTTGGCATGAAAAAAAACGGCGAATAA
Protein Sequence: MQDLFGGVNASTTIASTTAPTASAFTTDSSTIPESCAQQSGSSSPPQSIVSCQSEMEMEETTTASKEEYQISTRSHQRLSKPAIIRRNPPCREPSEEKSGDRDDEDLDSDGKPSSSCDEEKKTYLCPICDIQLDDQHEFTLHIRSHNNDNNNDSSNPNLSQFECRICFKVLSSSSSLDRHVLVHSKERPFRCRLCSVTFTTNGNMHRHMRKHNVNSTNSVNSSSPNESDAASHSDSSSSSTAASGSTQSTPRKSLRRRRYEHNNNNYSKKRKVDSLLNETDLDTNQNNRRRLKKSVNNNNENEDSEGQKYQCPICGREDFASLNVFETHLEESHPQYQIKCHQCNLSFKNHRVLNLHRFMVHHSADSNNTGSTSPPNPTDSKSPKSEGIIGFRDLTFVDFSSEKFPIIAKTVCEQSLHKADKNDDLIFECEKCTRAFPCASALEIHQKTCNNYNVNDEDDHKNSSSEDDLKREDFFAGLDLQNKSSSQDGFAKSPIQSRPSILTPPNSRKLHDYLTKPHIADNTKDLADIQSIISVTSTQSLLQQLTAQKSGTPMNLPIPAQITPPDSEARNNENQNEEELQDQFAAEFRKMKLRGEFPCRLCSAVFPNLRALKGHNRAHLSGAGSNGPYRCNMCPHSSVDKAALVRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHGKVTREDVKRAIIYHPSEDPTNDEAAASLNKMFNTTPTGRGSASLLPLTPTVPGEDIHKIYMSDVKRSLIFPTPPLTGDTPPTTKLSLTDIRSVISKLPIPNQADVPLSLYKDESYLISNLKSINNIKERIYPEESQTGLTIPKIQVKNVNELKSVPDYNSSDSEEEQFSRSNVITTPLSHYSRNPVPIQPPAPIDLSMDVLDLSKKKRDPTPEPTSPVPPPSSHADESEEDQPHDFTKKTLNETIHKARSQSPPLPLHSLPINQPNIFDKTQQLLLAQQFFKNNAINSNLYAAQIQHLYNNRDGVLTGPPPPPGTASQFPFGINPYLFQPHPFLTPTTSPQDFQEIKERIQKEIIRGLQMSGGGLIMDQLASERLQAFQKHSEQMTDTKFNAHMKPDESKSLDSLETLVTNNKTSLKMNENIISATPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNLTVGLPGRKPSISSIPNSQQFESKPPQISNILSNSVEKNLPNPLSVRQNEKKSPLLINDQVKYAILAQQLKQLQNTDKKESSMNDEDDDEERSSLIIDENSQQSTQSTDVEKQRKTESLEQKLAELRMNKEKLLKEESKTLESRKNDENSKNNEISDLVPVSQLLDNAAQIPFGDYFRRETEDVEMPTDDEEEEGLVASGSTSEGNVSGSDGNKSESDTTKKGIVKAKSEAVPSMTGKKKSAYSLAPNRVTCPYCHRKFPWSSSLRRHILTHTGQKPFKCLHCPLLFTTKSNCDRHLLRKHGNMLNNNSNGTGTTVALNASPTLSESNVNSSNYLMRNVPERPYKCSSCPSSTFSTLSNLKKHMSCKHNTSSGNASSHSRSHSPDGIKSATYDSHSSEDEYQKKDGWEQQINFGSSVEHTGNVPLPVSVSTSDLPFKCHLCEGSYGERQEALDHIKDYHATEYELLLSKGALESQQDTEHGQNGPNPEHNSDEPEEQVNLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCRRRFTLKHSMLRHRKKHGDLTEDGLKVNAQDVGNLDEQHVQRKTQQRRRRSSSSSLVPTEKEEDDAGDNGCNDDGDLIGNLLGIQDSSIIDKVLRSSADDAAKLLGMKKNGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01349122;
90% Identity: iTF_01349122;
80% Identity: -