Ster008356.1
Basic Information
- Insect
- Sisyra terminalis
- Gene Symbol
- bab1
- Assembly
- GCA_958496175.1
- Location
- OY292276.1:26738054-26744829[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.5e-12 7.2e-09 35.4 0.0 2 39 411 449 410 453 0.90 2 4 7.9e-13 6.7e-10 38.7 0.1 1 39 464 502 464 505 0.95 3 4 3.8e-18 3.2e-15 55.7 0.0 1 45 519 564 519 564 0.97 4 4 3.6e-19 3.1e-16 59.0 0.0 1 42 571 613 571 615 0.97
Sequence Information
- Coding Sequence
- ATGGCTGATGATGAACTGCGACATGGTGTCCTTGACGATGAGACTTCTAAGTATCAAAAAAGCACAAACTCGCAACATCAGCATTATTGTTTGCGATGGAATAATTATCAAACCAATATGACTTCAGTGTTTCATCAGCTATTAGAAAATGAAGCATTTGTAGATGTAACTTTAGCATGCAAAGATTTTTCGTTGAAAGCTCACAAGgtGGTCTTATCGGCATGttctacatattttcaaaaattgttaatgGAAAATCCGTGCAAACATCCAACGATAATAATGCCCCAGGACGTTGATTTTGTcgacttaaaatttataattgagttTGTTTATCGAGGCGAGATTGACGTGTCTGAGGAAGAATTGCAGtcgTTGCTACGAACGGCcgatcatttaaaaataaaaggctTATGCGAAGTGCCGACTGCCAATGGAAGTATTTCGTTAAATACTGAAGatcataaaattgaattgtcTCCATCCCCAATAATTTCACGTCGTTCGTATACGAAATTGCAACGTGTTAGTAGTTCAAACGCGAAAAAACGCCGTTACTTGCTCAACTCATTAACGAAAGAGGAAGATGCTCCGGAAAAGAAGATGCCTGCTGTGTTGATGCTCGAGTCGAAAAGTGCACCGGAAACGAACGAGGCGCAAATTTGGTCACCGTTATCGGGGGAAAATCGAGAAACTGATAATTGTAGTGGCCAAATCGTGTCAAGTTTAGGGCATGGAATGTTACCGACACCAACATTATTTACTGGCCATGTGGAATTACCACCTGAACCTCCAGCACCGACTGCGACACCTGTACCTTGTCCACCTCCTGATTTCATACCTAATTCACAAGCCCTACAGTTAACACATTGTTCTTCACCGCCAACGCATCATGATCTCAGTGATACAACCATGTCGAACTCGGATGAAAATAATGGCTCCAACCATAATTTCACACAATTTGACGATGTCaaggtcaaatttgaaacattACGTTCCGTAGACTCTGCGGGAGAAATGGATGCATGCAGTCGTTTATCCCAAGAGAGTTCAGATTCAATGCATCATTCATCACTAATGATTACTCCACATCTTCTAGATATGAATTCAGAGTCAAACCatcattcaaataaaatgaatggTCACTCATCCCAAAATTACCATCTACTTCAACATAACAGTTTGGGATCAAACGCAAGTGGACATGGCGGCGGTCCAAAAACGTGGAGTCAAGAAGACATGGAACTCGCGTTGGATGCATTACGAAATCATAACATGAGTTTAACAAAGGCTTCTGCCACATATGGCATACCATCCACTACTCTATGGCAGCGAGCTCATCGACTTGGTATTGATACTCCAAAAAAAGAAGGCCCAACTAAATCGTGGACTGAAGATAGTTTAAATTCAGCTTTGGAGGCATTACGAACCGGAACGATATCAGCCAATAAGGCCAGCAAAGCTTATGgTATACCGAGTAGTACACTTTATAAAATAGCTAGACGAGAAGGTATACGATTAGCAGCACCTTTCAATGCTGCACCAACCACATGGTCCCCAGAGGACTTGGAACGAGCTTTAGAATCAATTAGAACTGGCCAAACTTCTGTACAACGAGCGTCTACAGAATTTGGAATTCCGACTGGGACATTATATGGACGATGTAAGCGAGAAGGGATTGAACTATCTCGAAGTAATCCAACACCGTGGTCAGAAGATGCAATGGGCGAGGCTTTGGAAGCTGTGAGAGTTGGACAAATGTCGATTAATCAAGCAGCTATTCATTATAATTTACCATATTCGTCTTTGTACGGCCGTTTTAAACGTGGCAAATATGAAAACGATCCCTTAACAGGACCTGGTGGAAGtatattagaaaataatctaTCATCAGATAATACATCGACTAGTGGAACAATGCTCCCATCATCAGAAAGACAAATGTTACAACAATATAATCAACAAAATCACCAACATCATCACAGTCAACAACATTCACATGCACAGTCGCCACATTCTGATCTCACAGgaaatacaaattatattaGTTGA
- Protein Sequence
- MADDELRHGVLDDETSKYQKSTNSQHQHYCLRWNNYQTNMTSVFHQLLENEAFVDVTLACKDFSLKAHKVVLSACSTYFQKLLMENPCKHPTIIMPQDVDFVDLKFIIEFVYRGEIDVSEEELQSLLRTADHLKIKGLCEVPTANGSISLNTEDHKIELSPSPIISRRSYTKLQRVSSSNAKKRRYLLNSLTKEEDAPEKKMPAVLMLESKSAPETNEAQIWSPLSGENRETDNCSGQIVSSLGHGMLPTPTLFTGHVELPPEPPAPTATPVPCPPPDFIPNSQALQLTHCSSPPTHHDLSDTTMSNSDENNGSNHNFTQFDDVKVKFETLRSVDSAGEMDACSRLSQESSDSMHHSSLMITPHLLDMNSESNHHSNKMNGHSSQNYHLLQHNSLGSNASGHGGGPKTWSQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEDSLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPEDLERALESIRTGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYENDPLTGPGGSILENNLSSDNTSTSGTMLPSSERQMLQQYNQQNHQHHHSQQHSHAQSPHSDLTGNTNYIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349769; iTF_01348761; iTF_01348983;
- 90% Identity
- iTF_01349769; iTF_01348761; iTF_01348983;
- 80% Identity
- iTF_01349769;