Snig017392.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- CDC5L
- Assembly
- GCA_958496155.1
- Location
- OY292318.1:33422263-33430587[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-16 1.4e-13 50.9 1.5 2 46 9 54 8 54 0.97 2 2 5.6e-12 5.1e-09 36.3 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- atgcCGCGAATTATGATAAAAGGGGGTGTTTGGCGCAACACCGAGGATGAAATCCTCAAAGCCGCTGTTATGAAATATGGCAAAAACCAATGGTCTCGAATAGCTTCGTTACTTCATCGTAAATCAGCCAAGCAATGTAAAGCCCGTTGGTTCGAATGGTTAGATCCCAGCATCAAGAAAACCGAATGGTCTCGGGAAGAAGATGAAAAGCTCCTGCATTTGGCTAAGCTTATGCCCACCCAGTGGCGTACGATAGCCCCGATTATTGGTCGTACAGCGGCTCAATGTCTTGAACGATATGAATATCTTTTGGATCAGGCACAGAAGAAAGAAGAAGGAGAAGATGCTTCCGATGATCCTCGCAAGCTTAAACCAGGAGAAATCGATCCGAATCCCGAAACAAAACCGGCTCGACCAGACCCGAAAGACATGGATGAAGAtgaattgGAAATGTTATCCGAAGCTCGAGCTCGCTTAGCTAACACACAAGGCAAAAAAGCCAAGCGAAAAGCTCGAGAAAAACAACTAGAAGAGGCTCGTCGTTTGGCGGCACTACAAAAACGTCGTGAATTACGTGCTGCTGGAATTGCAATAAATGCACGTAGGAAGCGTAAACGAGGTGTTGACTACAACAAAGAAATTCCATTCGAAAAACGACCTGCGATTGGATTTTATGATACATCCAAAGAAGAAATCGATCCTTCTGAAACAGATTTTTCAAAGCTACGCCAACAACACTTAGATGGGGAACTTCGGACAGAAACCGAAGAACGTGAACGTCGTAAAGATAAACAAAAACTCAAGCAACGTAAAGAAAATGATATTCCATTAGCGATGTTACAAAACCAGGAACCTGCAAAGAAACGTTCAAAATTAGTTCTGCCAGAGCCTCAAATTTCCGATAAGGAGCTGCAGCAAGTTGTGAAACTTGGAAGAGCCAGTGAAGCGGCTCGAGAAGTTGCCATTGAAAGTGGAATTCAATCCACTGATTCGTTGCTAACGGATTATTCGATCACGCCTCAAGTAGCGGCGACTCCACGAACTCCAGCTCCGCAGACCGATCGTATTTTACAGGAGGCACAGAATATGATGGCGTTAACCCACGTAGATACGCCACTGAAAGGGGGTTTGAACACGCCGTTACATAACTCAGACTTTAGTGGGGTTTTGCCACAGAGTCAAGTTGTGGCCACGCCCAATACTGTTTTAGCAACTCCATTTCGTTCGACGCGGAGCGATGGGGCTTCGACTCCGAGTTCAGCAGGATTTTTGACACCACGATCAGGAGCTGTTGTCCCTCTCGGCTCTCAGAGCCAAATTGGACATACACCCGCATCTTTACGAGATAAATTAAGTATTAATCCTGAGGATAGTTTAGAGGTGGCTGACACGCCGCATGCCTTTAAAAACTAtcagaaaatattaaaagagcAGTTACGTTCTGGTCTGAGTACACTTCCAGCCCCGAAGAATGACTATGAGATTGTCGTTCCAGAACATGAAGAAAATGAATCGCAGCCGGTTCAAGAAAATGGAGTTGAAGATCAAGCGGATATTGATGCGAGACAACAAGCAGAGTTAAAAGCTCagagacAACGAGAACTTGCACTCCGATCTTTAGTGATTCAGCGTGAATTACCTCGACCCCTAGATATCAATTTAGCTGTGTTACGACCTCCCCAAGATTGTAATTCCTTAACGGATCTACAAAAGGCCGAAGAGCTGATAAAACACGAAATGGTTACAATGTTACACTACGACGCCGTGAAAAATCCTGTTCAACCTCTGACCAGTAACAAGAAACAAGTTGTATCCCAAGCTCAACATTTAGCTTACTTAGAGCGGCATCCCTATGACAACATCGATAAGAAAGAGCTCGATTTTGCTCGGGAAATGCTAAAGAAAGAAATGGATGTTGTAAAACAAGGAATGAATCATGGAGATTTGTCGATCGAAGCGTATACGCAAGTGTGGGAAGAATGTTTAGCACAGGTGTTATTTTTACCTAGTCAAAATCGTTACACCCGCGCTAATTTAGCCAGCAAAAAGGATCGCTTGGAATCAGCTGAGAAACGGCTTGAACAAAATCGTAATCACATGGCAAAAGAGGCGAAACAAGCTGCAAAAATGGAAAAGAAACTACGAATTTTAACAGGGGGCTACCAATCACGTGCACAGGCTCTTATCAAGAAGATCCAGGATGCCTTCGATCAGATCGAGCAACACCATTTGGAGTTATCGACGTTCCAGTTCTTACAAGAGCAGGAAAAAGCGGCGTTGCCGAGAAGAATCGCgtCTTTAACGGAAGATGTAAATCGACAGTTGGAGCGTGAGAAGGAATTACAAAAAAGATACGGAGAATTACAAGATAAAATTAGAGATTTACAACAAGCATCGACGCTTGTTAATGGAGATGTATCTAATTGA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDASDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIAINARRKRKRGVDYNKEIPFEKRPAIGFYDTSKEEIDPSETDFSKLRQQHLDGELRTETEERERRKDKQKLKQRKENDIPLAMLQNQEPAKKRSKLVLPEPQISDKELQQVVKLGRASEAAREVAIESGIQSTDSLLTDYSITPQVAATPRTPAPQTDRILQEAQNMMALTHVDTPLKGGLNTPLHNSDFSGVLPQSQVVATPNTVLATPFRSTRSDGASTPSSAGFLTPRSGAVVPLGSQSQIGHTPASLRDKLSINPEDSLEVADTPHAFKNYQKILKEQLRSGLSTLPAPKNDYEIVVPEHEENESQPVQENGVEDQADIDARQQAELKAQRQRELALRSLVIQRELPRPLDINLAVLRPPQDCNSLTDLQKAEELIKHEMVTMLHYDAVKNPVQPLTSNKKQVVSQAQHLAYLERHPYDNIDKKELDFAREMLKKEMDVVKQGMNHGDLSIEAYTQVWEECLAQVLFLPSQNRYTRANLASKKDRLESAEKRLEQNRNHMAKEAKQAAKMEKKLRILTGGYQSRAQALIKKIQDAFDQIEQHHLELSTFQFLQEQEKAALPRRIASLTEDVNRQLEREKELQKRYGELQDKIRDLQQASTLVNGDVSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349570; iTF_01400292; iTF_01059042; iTF_01184458; iTF_01058348; iTF_01096560; iTF_01186131; iTF_00369498; iTF_00620492; iTF_00429807; iTF_00920594; iTF_01126324; iTF_00332294; iTF_00028679; iTF_01275204; iTF_01225597; iTF_01040047; iTF_00872979; iTF_01039157; iTF_01040794; iTF_01229659; iTF_00903071; iTF_01530123; iTF_01510554; iTF_01060567; iTF_01342954; iTF_00004596; iTF_01050308; iTF_00238842; iTF_01343900; iTF_01104255; iTF_00766442; iTF_00768175; iTF_00469558;
- 90% Identity
- iTF_01349570;
- 80% Identity
- -