Hruf025243.1
Basic Information
- Insect
- Harpalus rufipes
- Gene Symbol
- CDC5L_1
- Assembly
- GCA_951394225.1
- Location
- OX596279.1:37106509-37110965[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-14 3.2e-10 41.8 0.9 9 46 6 44 6 44 0.97 2 2 5.3e-12 1.7e-08 36.3 0.1 1 45 50 93 50 94 0.93
Sequence Information
- Coding Sequence
- atggacttAAATAcaGATGAAATCCTTAAAGCAGCGGTAATGAAATATGGCAAAAATCAATGGTCACGTATAGCATCTCTTCTACATCGTAAATCAGCTAAACAATGTAAAGCTCGTTGGTTTGAATGGCTCGACCCCAGCATAAAGAAAACCGAGTGGTCTCGAGAAGAAGACGAAAAACTACTACATTTAGCAAAGTTAATGCCCACTCAGTGGAGAACTATAGCTCCGATTATTGGTCGTACTGCTGCTCAGTGTTTAGAGAGATATGAATACTTACTGGATCAAGCGCAGAAAAAGGAAGAAGGAGAGGATAGTACAGATGATCCCAGAAAGTTGAAACCGGGTGAAATAGATCCCAATCCTGAAACTAAACCTGCCCGTCCTGATCCAAAGGATATGGATGAAGATGAACTTGAAATGTTATCAGAAGCTAGAGCTAGATTAGCCAATACTCAAGGAAAAAAAGCTAAAAGAAAGGCAAGAGAAAAACAATTAGAAGAAGCTAGGCGCTTAGCTGCTTTACAAAAACGTAGAGAACTACGTGCTGCTGGTATTACTGTAACATCTCGCAGAAAAAAGAAACGCGGCGTCGATTACAACGCAGAAATACCTTTCGAAAAGAAACCATCTTCTGGATTTTATGATACTTCTAAAGAGGAAATTGACCCCATGGCTCCAGATTTTTCCAGAATGCGGCAACAACATCTGGATGGCGAACTACGAATAGAAAAAGAAGAACGTGAGCGCCGCaaagataaacaaaaattaaaacagcGCAAAGAAAACGATATTCCATTAGCAATGTTACAAAATCAAGAACCTGCTAAAAAACGTTCTAAATTAGTTCTTCCGGAGCCACAAATTTCTGACCAAGAACTCCAACAAGTTGTGAAACTTGGACGCGCGAGTGAAGTCGCTAGAGAAGTTGCTACTGAAAGCGGGGTTCAAATGACGGATACTTTAATCGCGGATTATTCAATAACACCACAACATGCTGTTACACCGCGTACTCCAGCACCGCAGACTGACCGTATTTTACAAGAAGCGCAAAATATGATGGCTCTTACACATGTTGATACACCGTTAAAAGGTGGTTTGAATACTCCTTTACATAATTCAGATTTTAGCGGAGTTATGCCGCAGAGTCAAACCGTAGCAACACCAAATACCGTATTAGCAACACCATTTAGATCCGCCCGAAGTGATGGAGCTGCAACTCCTAGTTCGACAGGTTTTATGACACCAAAATCGGGCGCTGTTGTGCCTGTTGCTAcacaaAACGCTGGTTATACCCCAACACCAATTcgagataaattaaatattaatcctGAAGAAGGTTTAGAAGTTGGTGACACTCCACAAGCTTTAAATAATTAccaaaaaattatgaaagagCAATTGAGAGCAAGTTTAAATTCTCTACCAACTCCAAAAAATGATTACGAAATTGTCGTACCTGAACAAGAGGAAGAGCAAAGGGAGGAAGTAAAAGAAAGTTTTGTCGAAGATCAAGCTGATTTAGATGCCAGGGCTCAAACAGAATTGAAATTAAAacgaGAACGAGAGTTGGCATTGAGATCATTGGTAATCCAGCGAGATTTACCCCGCCCTCACGATATCAATTTGGCTGTACTTCGTCCCCCAATGGACAGTCAATCATTATCAGAAATGCAACGCGCTGAAGAAttaatcaaaagtgaaatgatTACAATGCTCCATTACGATTCTgttatgaatccaatacctccacCGGCGACACAATCTAAACGTCCTACTGTTACTCATGCTGAACATCTCGCATATTTGGAACAAAATCCTTACGATAATTTTACTCCAGAGGAATTAGATTCAGCTAGAAACATGTTAGGACATGAAATGGAAATCGTCAGACATGGAATGGGTCATGGAGAACTATCCTTAGATTCTTACACTCAAGTTTGGGAAGAATGTTTAAGTCAAGTTTTGTTTTTACCGAATCAGAATCGTTATACTAGAGCTAATCTTGCCAGCAAAAAAGATAGGCTTGAATCAGCAGAAAAGCGATTAGAACAAAACAGAAGTCACATGTCGCGGGAAGCAAAGCGCGCGGCAAAAATGGAGAAAAAATTACGAATTATTACCGGTGGTTATCAATCTCGCGCGCAATCTTTATTAAAACAGTTACAAGATTTATATGAACAAACTGATCAAGCAAATTTGGAATTATCAACGTTTAAATTTCTTCAAGAACAAGAAAAAGCTGCACTACCCCGAAGAATAcagTCACTCACCGAAGACGTCAACCGGCAAATGGAACGCGAAAGGCTTTTGCAGAAACGGTACGGCGAACTTCAAGAAGAAATTCGCGTGAAACAGGAACTGTTGGCGGCGCAGCAACAGCAACCTGTTCAAGCAGCACAACCACAGCAAACTATCACTCCTGACAGTCAATATGATGGCGTTATCCAAGCGCCAACGACTGTCTCACAAACAAGTGATGAAatgtag
- Protein Sequence
- MDLNTDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDSTDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGITVTSRRKKKRGVDYNAEIPFEKKPSSGFYDTSKEEIDPMAPDFSRMRQQHLDGELRIEKEERERRKDKQKLKQRKENDIPLAMLQNQEPAKKRSKLVLPEPQISDQELQQVVKLGRASEVAREVATESGVQMTDTLIADYSITPQHAVTPRTPAPQTDRILQEAQNMMALTHVDTPLKGGLNTPLHNSDFSGVMPQSQTVATPNTVLATPFRSARSDGAATPSSTGFMTPKSGAVVPVATQNAGYTPTPIRDKLNINPEEGLEVGDTPQALNNYQKIMKEQLRASLNSLPTPKNDYEIVVPEQEEEQREEVKESFVEDQADLDARAQTELKLKRERELALRSLVIQRDLPRPHDINLAVLRPPMDSQSLSEMQRAEELIKSEMITMLHYDSVMNPIPPPATQSKRPTVTHAEHLAYLEQNPYDNFTPEELDSARNMLGHEMEIVRHGMGHGELSLDSYTQVWEECLSQVLFLPNQNRYTRANLASKKDRLESAEKRLEQNRSHMSREAKRAAKMEKKLRIITGGYQSRAQSLLKQLQDLYEQTDQANLELSTFKFLQEQEKAALPRRIQSLTEDVNRQMERERLLQKRYGELQEEIRVKQELLAAQQQQPVQAAQPQQTITPDSQYDGVIQAPTTVSQTSDEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01348779;
- 90% Identity
- iTF_00469558;
- 80% Identity
- -