Snig015360.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- Su(H)
- Assembly
- GCA_958496155.1
- Location
- OY292317.1:42066787-42067695[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.49 5.1e+03 -2.3 0.0 72 99 125 153 115 172 0.56 2 2 5.9e-31 6.2e-27 94.4 0.0 1 62 239 300 239 302 0.98
Sequence Information
- Coding Sequence
- ATGCCTCATCAGTATGGTTTGCAAGGACCTGGGTTGCCACATGGCACGCAATCGCCGACCCCGGCTCAGCACGGCGCGATATTTCCACGATTTCCTTCAGGAAATGCCGCCTCGTCTATACCACCAGGAGGTGGTGGTGTTGTTGGTAGTGTTCTCGGTGGTTATAATCGTACGGAAGATCAACGCTTAACACGCGAGGCCATGGAACGATATCTTCGCGATCGTTCCGACAAAGTCATTGTCATACTGCATGCGAAAGTCGCTCAAAAATCATACGGAAACGAGAAGCGGTTCTTCTGTCCGCCGCCGTGTATTTATTTATCGGGAGACGGCTGGAGGCTGCGACAGGAGCAAATGTTACGCGACGGCGAGTCCGAACAGGCGTCGCAGCTCTGTGCCTTCATCGGAATCGGAAATTCCGACCAGGACATGCAACAGTTAGACCTGAACAACGGCAAGCAGTACTGTGCGGCGAAAACGCTCTACATCAGTGATTCGGACAAGCGAAAACATTTTATGTTGTCGGTGAAGATGTTCTATGGATCGGGACACGACATCGGCGTGTTTCATAGTAAACGAATCAAAGTGATCTCGAAGCCGTCGAAAAAGAAACAGTCGTTGAAGAATCCGGATTTGTGTATAGCGAGTGGTACAAAAGTGGCGTTGTTTAATCGGTTACGATCGCAAACGGTGTCGACACGTTATTTGCATGTGGAAAATGGGAATTTTCACGCGAGCTCAACGCAATGGGGCGCGTTTACGATTCATCTGCTCGATGATAACGAGAGCGAAAGTGAGGAGTTTCAAGTTCGAGATGGATACATTCACTATGGCTCCACCGTAAAATTAGTGTGCTCCGTTTCGGGAATGGCTTTACCCAGATTAATTATACGTAAAGTATGtcattaa
- Protein Sequence
- MPHQYGLQGPGLPHGTQSPTPAQHGAIFPRFPSGNAASSIPPGGGGVVGSVLGGYNRTEDQRLTREAMERYLRDRSDKVIVILHAKVAQKSYGNEKRFFCPPPCIYLSGDGWRLRQEQMLRDGESEQASQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGSGHDIGVFHSKRIKVISKPSKKKQSLKNPDLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFQVRDGYIHYGSTVKLVCSVSGMALPRLIIRKVCH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086067;
- 90% Identity
- -
- 80% Identity
- -