Salt001689.1
Basic Information
- Insect
- Siphlonurus alternatus
- Gene Symbol
- retn
- Assembly
- GCA_949825025.1
- Location
- OX463778.1:16659336-16666564[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 8.1e-14 52.4 0.1 28 89 3 62 1 62 0.93 2 2 2.1 9.8e+03 -2.3 0.0 26 38 203 215 158 220 0.68
Sequence Information
- Coding Sequence
- ATGGCGAAGCAGGTGCTGGACCTGTTCGAGCTGTACAACCTGGTGATCGCGCGCGGGGGTCTGGTGGACGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCACCTCCCCTCCTCCATTACCTCGGCAGCCTTCACGCTCCGTACACAGTACATGAAGTACTTATATCCGTACGAGTGTGAGAAGAGACAACTGAGTTCTCCTACGGAGCTTCAGGCCGCGATTGATGGTAACCGGCGCGAGGGTCGCCGCAGCAGCTACGGCACTTACGCAGAAATGGTCCAGCGTAGTCCTGGACTTGGACCAGCGCTCGGTGCCGCCGCCACCAGCCTGGCCCAGCAGATGTCACCCTTGAGCCTGGTCACCGCAAGCAGACCCACCATGAACGGCAACGGAACACATCACCACACACCACCGCACCCGCTCGCAATGGCGCCCGGCAACTGCCTGGCCCCCGCGGAGTTCGAGGCGCGCATGGCCGAGTACGTGAAGCTGCTGGACAAGGAGCTGCGACGCACGGCCTCCACTCCGCCTACCGGCAGGCAAGGTTCGACGTCACCCCCTCCCTCGACGTCTCCGCGCGAGGCTCTGAACGCACTCGAGATGTCTCGGCTGACGCTGTGGAATCTGTACCACAACGCGGGCGCCATGCCTGGTGAAGAAGCCCGGCCGCCCCCTCCGCCACCCCCGCAGCGCGAGGCTCTCAACCTGGAGGTGAGCCGGCAGCAACAAGCTGCGGCGGCTGCagccgcagcagcagcagcagcggcggCAGAACAGCAAGCGCGAGCCATGGAGGCAGTGGTGAAGAAGGAGATCTCGGAGAACGGCCCCGCCCCCGCCAAGAGACCTCACTTGTTGGACGAGGAAGCAGCCCTCAGGCTACATGCGGCCGGAGTGCCAGGCGCGCACATCAAGATCAACAGCAGAGGTGACGCGCGAGGCGACAACTCGTCACTTGTGGTCAGCATGGAGATCAACGGAGTCCTCTACCAAGGCGTGTTGTTCGCCCAAGTACCCCCCCAGCGTGTAGGCCGCCTCTCGTGA
- Protein Sequence
- MAKQVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRQLSSPTELQAAIDGNRREGRRSSYGTYAEMVQRSPGLGPALGAAATSLAQQMSPLSLVTASRPTMNGNGTHHHTPPHPLAMAPGNCLAPAEFEARMAEYVKLLDKELRRTASTPPTGRQGSTSPPPSTSPREALNALEMSRLTLWNLYHNAGAMPGEEARPPPPPPPQREALNLEVSRQQQAAAAAAAAAAAAAAEQQARAMEAVVKKEISENGPAPAKRPHLLDEEAALRLHAAGVPGAHIKINSRGDARGDNSSLVVSMEINGVLYQGVLFAQVPPQRVGRLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00650675; iTF_01046029; iTF_00630261;
- 90% Identity
- iTF_00650675; iTF_00630261;
- 80% Identity
- -