Edan013703.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- retn
- Assembly
- GCA_000507165.2
- Location
- KZ501709.1:263906-273977[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 3.8e-14 52.9 0.1 28 89 3 62 1 62 0.93 2 2 4.6 1.7e+04 -3.7 0.0 26 38 202 214 185 215 0.73
Sequence Information
- Coding Sequence
- ATGGCAAAGCAAGTGCTGGACTTATACGAACTGTACAACCTGGTAATCGCACGAGGTGGACTCGTGGATGTGATCAACAAAAAACTTTGGCAAGAAATCATCAAAGGTCTGCATCTTCCCTCCTCCATCACCTCAGCGGCGTTCACTCTACGCACCCAATATATGAAGTACTTGTATCCCTACGAGTGCGAAAAACGTCAGTTGAGTTCACCCTCCGAGCTGCAGGCCGCGATAGACGGCAACAGACGTGAAGGTCGTCGCAGCAGCTACGGAACCTATGCCGAGATGGTCCAGCGAAGCCCCGGTTTGGGTCCTGCCTTGGGTGCTGCTGCGACCAGTCTGGCCCAGCAAATGTCGCCTCTGAGTCTCGTCACCGCTAGCAGACCCATCATGAACGGCAACGGCACACACCACGGTCCTCCGCACCCTCTTGCTCTGcCTCCAGCAAACTGCATGGCTCCTGGCGAGTTCGAGGCACGCATGGCCGAGTACGTTAAAATTTTGGACAAAGAATTACGGCGCACAGCGTCTACCCCACCTTCTGGCCGACAAGGCTCCACGTCTCCTCCCGCGTCGACATCTCCGCGTGAAGCCCTGAACGCGCTCGAAATGTCCCGACTGACTCTGTGGAATTTGTACCACAACGCAGGGGCTATTCCCACTGAAGAGGGTCGACAGCCACCGGCACCTCCACCTCAGCGTGAGGCCCTCAACCTCGAGGTGAGCCGGCAACAGcaagcagcggcagcagcagcggcggctGCAGCAGCGGCCGCGGCGGAGCAGCAAGCACGAGCTCTGGACGCTGTGGTGAAGAAGGAGATCTCGGACAACGGTCCTGCACCGGCAAAGCGACCTCACTTGCTGGACGAGGAGGCGGCGCTGCGGTTGCACGCCGCAGGAGTACCTGGTGCGCACATCAAGATCAACAGCAGAGGTGATGCACGTGGTGACAACTCATCTCTGGTGGTCAGTATGGAGATCAATGGAGTGATGTACCAAGGTGTATTGTTTGCACAAGTGCCGCCTCCTTCCACCAGAATTGGAGCTCGTCTCTCGTGA
- Protein Sequence
- MAKQVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRQLSSPSELQAAIDGNRREGRRSSYGTYAEMVQRSPGLGPALGAAATSLAQQMSPLSLVTASRPIMNGNGTHHGPPHPLALPPANCMAPGEFEARMAEYVKILDKELRRTASTPPSGRQGSTSPPASTSPREALNALEMSRLTLWNLYHNAGAIPTEEGRQPPAPPPQREALNLEVSRQQQAAAAAAAAAAAAAAEQQARALDAVVKKEISDNGPAPAKRPHLLDEEAALRLHAAGVPGAHIKINSRGDARGDNSSLVVSMEINGVMYQGVLFAQVPPPSTRIGARLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01347767;
- 90% Identity
- iTF_01347767;
- 80% Identity
- -