Smay025590.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- pnr
- Assembly
- GCA_034509805.1
- Location
- JASXSY010001742.1:11485-17394[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 5.4e+03 -1.7 0.2 20 26 75 81 71 82 0.77 2 2 1.4e-12 7.5e-09 36.2 7.1 1 35 496 528 496 528 0.93
Sequence Information
- Coding Sequence
- ATGGACAGCAACGGTGAGACGAAGCAGCAACAGCAGCCTCAACCGcctccgccgccgccaccgccgacgAGCACAACGGATCTCTATCAAATATGCCGTCTTTGTCTGAGCACGTTGAACACTGACGAAGGCGAATCGGTATTCAACAACCAGGTGCCTTCGTTGCCAGAGAAAATCTACCGCGTATTTGGGatacaaaTCACTGATGCTAAGGATTTGCCAAATAAACTTTGCTCAAAATGTGTGCAAAATACTGAACAGTGTTATAGCCATAGAGAGACATATAAACGCCAAGAACGTGTTTTGTTTGATATGATTAAAAAACCAGCAGTtgaGGAAGTTAAAAACTCACCAAATTCTGAGTATGTGTATAGTCCTGCAGATTCAAATCACTCATCATCATCAGGTGTATCATCTGATCCTCGTTACATTAAGGCAAATAATTCTACTAATAACATGAACAACAATTCAACTTCTCCACCGTATGAGACTAATGCATCTCTTGCTTCTCATGttGAAGTTATTCAAGGGTGTGATGAAATGGCAGCTGAAGTAACAATTGCTCATGATTCAGAAGAAACTGTTTCTGGAGATGATACTATTTGTACTGATAACAATGCTGAGTATGGAACATATaatgatgatgaaaatattattgtggtCAAAACTGAACCTGATGACGAATATGATGAAGAATAtttcaatGGTTTGTATAGCGCTAAAAATGATGAAggaaatgaaaattatgatcAACAAGATGGACCTAAAGTAATTGCTAGTGTTCAGTTTCCAATTGTGAATGGTACAATTGTTAATGGTACCCACAAAATTGGCCAAAAGCAATTTTCTTTAGTAAATTGCATTCCAACATCTTGGgCTTCTAGTACTAGTAAAGATCGTCGTAAACAAAGCTGTCCAACCAGGGCATTAGAGCTAAGTGGTTTTCGAACGCAAGTAGCTGGCGATGATACTAATTCATCAGATGAAGGAAACGTTTCTAATTGGACAACCAAAAAAATTCGATCCAATTCCCCTGCTGTTATTGTAAAACCTGCATACGCATGGCCAAACTTACAGGGAACTGGCCAAACCctaatatttcaaacaaaaaaTCCTGATGGTACAACATCTGAATTACGTCCACAAGTTATGCAAGTTGGTGAATGGGCTAATAATCAAGGTCAATCAAATGCCCCAACTGATCCATCAGATCGTATGGGTATGTTATTATTTGCTGCAACTCATATTCAAGAACTATCTACTGAAAGTGATGATGGCCAATCTCCTGGCACTCCCAAGGGTGCTACTGTAGTACGTGGGAAATTAGTATCTTCTGACCAAAAGCGTAAATTGTATCAGACACAAGCTACAATTAGGCGGTATTCAGATGGTCATCAAGTACAACAGCAACAAGTTAAAGACATAAATGCTTCACCAAACATACCCAGAAAACGCACTGCAAGAGAATCATCAGTTCAAAGAATGTGTAGTAATTGTGGTACTACATGTTCAACAATATGGCGACGCTTAAATGAAGACCCAGTATGTAATGCCTGTGGATTATACTACAAGCTACATGGAAAAATTAGACCACCAACTATGAGACGTGATACAATACATACCAGACAACGTAGAAAACGATCAGACAACGGTATGGACATAAgcatgaataagaaaaaaatcaaaattaaaaaaacagaaGATTGTAAAATAGAAGAACAAGAGTATGAAGTAGAACAACCACCATCGCCTAATTCAGCGGCTGTACAAACTATAATTGAAGAACCCGTTCAAGATGAAACACCATTAAATCTTGTCAACAAATAA
- Protein Sequence
- MDSNGETKQQQQPQPPPPPPPPTSTTDLYQICRLCLSTLNTDEGESVFNNQVPSLPEKIYRVFGIQITDAKDLPNKLCSKCVQNTEQCYSHRETYKRQERVLFDMIKKPAVEEVKNSPNSEYVYSPADSNHSSSSGVSSDPRYIKANNSTNNMNNNSTSPPYETNASLASHVEVIQGCDEMAAEVTIAHDSEETVSGDDTICTDNNAEYGTYNDDENIIVVKTEPDDEYDEEYFNGLYSAKNDEGNENYDQQDGPKVIASVQFPIVNGTIVNGTHKIGQKQFSLVNCIPTSWASSTSKDRRKQSCPTRALELSGFRTQVAGDDTNSSDEGNVSNWTTKKIRSNSPAVIVKPAYAWPNLQGTGQTLIFQTKNPDGTTSELRPQVMQVGEWANNQGQSNAPTDPSDRMGMLLFAATHIQELSTESDDGQSPGTPKGATVVRGKLVSSDQKRKLYQTQATIRRYSDGHQVQQQQVKDINASPNIPRKRTARESSVQRMCSNCGTTCSTIWRRLNEDPVCNACGLYYKLHGKIRPPTMRRDTIHTRQRRKRSDNGMDISMNKKKIKIKKTEDCKIEEQEYEVEQPPSPNSAAVQTIIEEPVQDETPLNLVNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01331107;
- 90% Identity
- iTF_00670626;
- 80% Identity
- -