Schi020143.1
Basic Information
- Insect
- Schlechtendalia chinensis
- Gene Symbol
- pnr
- Assembly
- GCA_019022885.1
- Location
- CM032344.1:9805047-9810824[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.65 3.1e+03 -1.7 0.2 20 26 86 92 82 93 0.77 2 2 9e-13 4.3e-09 36.2 7.1 1 35 505 537 505 537 0.93
Sequence Information
- Coding Sequence
- ATGGAAGTCGAGACGAAACGGTCGCAACAACAGCAGCAGCAGCAGCAGCCGCCGCCGCTACCGCCGCCGCCGCCGCCGCCGCCGCCGGTGGTGACGCCGATCAGCGCGACGGACCTCTATCAGATATGCCGTCTTTGTTTGAACACGTTGAACGCGGACGACGGCGAATCGGTGTTCAACAACCAAGTGCCGTCGCTGCCGGAGAAAATCTACCGTGTGTTCGGGGTGCAAATAACTGATGCTAAAGATTTGCCAAATAAACTTTGCTCAAAATGTGTGCAAAATACTGAACAGTGTTACAGCCATAGAGAAACATACAAGCGCCAGGAACGTGTCTTGCATGATATGATTAAAAAGCCAGCAGTTGAGGAAATTAAGAACTCTCCACATTCTGAATACGTATACAGTCCTGCGGATTCAAACCACTCATCATCATCAGGTGTATCATCAGATCCTCGTTACGTTAAAGCAAACAATTCTACAAATAACATGAATAATACTTCTACTTCTCCACCGTACGAGACTAATGCATCTCTCGCTTCTCATGTTGAAGTTATTCAAGGGTGCGATGAAATGGCAGCAGAAGTGACCATAGCTCACGATTCAGAAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATGGGACATACAATGACGATGAAAATATTATTGTGGTCAAAACTGAACCTGATGACGATTATGAAGAAGAATATTACAATGGTTTGTATAGTAAAAATGATGAAGGCAATGAAAACTATGAACAGCAAGAAGGACCAAAAGTTATAGCGAGTGTCCAGTTTCCAATTGTAAACGGCACAATTGTTAATGGTGCCCACAAAATTGGTCAAAAACAGTTTTCTTTGGTAAATTGCATTCCGACTTCTTGGGCTTCTGGTTCGAGCAAAGACCGCCGTAAGCAAAGTTGTCCAACCAGAGCAATGGAATTGAGTGGTTTCCGAACACAAGTTGCTGGTGATGACACTAATTCATCGGACGAAGGGACTGTTTCTAATTGGACAACCAAAAAAATTCGATCTAATTCTCCTGCTGTTATAGTAAAACCAGCGTATGCTTGGCCAAACTTGCAAGGCAGTGGTCAAACCCTAATATTTCAAACTAAAAATCCAGACGGTACAACATCTGAAATACGTCCGCAAGTCATGCAAGTTGGTGAATGGGCCAACTCAAATCAAGGTCAATCGAATGCGCCTACCGATCCGTCTGACCGTATGGGTATGCTGTTATTTGCTGCTACACATATTCAAGAGTTGTCCACTGAGATTGATGACGGTCAGTTTCACAACACACCCAAAGGTGCAACAATGGTACGTGGAAAATTAGTGTCGTCTGAACAAAAACGTAAAATATATCAGACGCAAACTATCAGACGGTATTCAGAAGGTCATCAAGTACAACAGCAAATTAAAGACATTAATGCTTCGCCAAACATACCCAGAAAACGCACCGCGAGAGAATCGTCGGTCCCAAGAATGTGCAGCAATTGTGGAACCACATGTTCAACAATATGGCGGCGACTTAATGAAGACCCAGTGTGTAATGCTTGTGGATTATACTACAAACTACATGGAAAAATCAGACCGCCGACAATGAGACGCGATACAATACATACTAGACAACGTAGAAAACGATCAGACAACGGTATGGACATAAGCATGAATAAGAAAAAAATCAAAATTAAAAAAGCAGAAGAAATTAAAATAGACCAAGAAGAGTATGAAGTAGAACAACCACAGTCTCCTAATTCAGCAGCAGTGCAGACTATAATCGAAGAACCGGTCCCAGACGAAACACCATTAAACCTTGTCAAATAA
- Protein Sequence
- MEVETKRSQQQQQQQQPPPLPPPPPPPPPVVTPISATDLYQICRLCLNTLNADDGESVFNNQVPSLPEKIYRVFGVQITDAKDLPNKLCSKCVQNTEQCYSHRETYKRQERVLHDMIKKPAVEEIKNSPHSEYVYSPADSNHSSSSGVSSDPRYVKANNSTNNMNNTSTSPPYETNASLASHVEVIQGCDEMAAEVTIAHDSEEXXXXXXXXXXXXXXXYGTYNDDENIIVVKTEPDDDYEEEYYNGLYSKNDEGNENYEQQEGPKVIASVQFPIVNGTIVNGAHKIGQKQFSLVNCIPTSWASGSSKDRRKQSCPTRAMELSGFRTQVAGDDTNSSDEGTVSNWTTKKIRSNSPAVIVKPAYAWPNLQGSGQTLIFQTKNPDGTTSEIRPQVMQVGEWANSNQGQSNAPTDPSDRMGMLLFAATHIQELSTEIDDGQFHNTPKGATMVRGKLVSSEQKRKIYQTQTIRRYSEGHQVQQQIKDINASPNIPRKRTARESSVPRMCSNCGTTCSTIWRRLNEDPVCNACGLYYKLHGKIRPPTMRRDTIHTRQRRKRSDNGMDISMNKKKIKIKKAEEIKIDQEEYEVEQPQSPNSAAVQTIIEEPVPDETPLNLVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00812382; iTF_00134977; iTF_01168130; iTF_00942476; iTF_01329450; iTF_01306061; iTF_00184976; iTF_01305211; iTF_00469291; iTF_00670626; iTF_00309194; iTF_01500012; iTF_01032563; iTF_01038900; iTF_01434616; iTF_00418650; iTF_01170238; iTF_01347652; iTF_01346769; iTF_00341007; iTF_00135831;
- 90% Identity
- iTF_00309194;
- 80% Identity
- -