Basic Information

Insect: Sipha maydis
Gene Symbol: Hr39
Assembly: GCA_034509805.1
Location: JASXSY010000167.1:38675-43967[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.064 1.4e+03 -0.4 5.0 49 160 229 255 104 319 0.45

2 3 1e-08 0.00022 22.0 0.2 1 76 400 476 400 511 0.74

3 3 2.4e-72 5.1e-68 231.6 0.3 159 408 452 710 435 710 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.064	1.4e+03	-0.4	5.0	49	160	229	255	104	319	0.45
2	3	1e-08	0.00022	22.0	0.2	1	76	400	476	400	511	0.74
3	3	2.4e-72	5.1e-68	231.6	0.3	159	408	452	710	435	710	0.88

Sequence Information

Coding Sequence: ATGGCCAACAGCGACGCTACAATGTGGGGCCACAGCGTGCAAGTGTCGTCCGGTCCAGTCACCGTAACGTCCATTAATCTGATCGCTCCTCGGTTGCCCAACACGCAGATCACGACGATAAAAGAGGAACCGAACGAAAAGGACGGTACAATGACCGAAATCAAAGAAGACAACATCGATGAAGTTGGATCTGAATGCGACCGAGAGGttagtaaaattgatttttccggAGTCACTATGAGAAGTAAAAAAATGAGAGCAGTCGAAGAAAACATGCCTCGGCCAATGTCCTGGGAAGGAGAGCTATCCGATTCAGAAATGAAACAAgatgAAGATAGAATTATGGACATGCAAACaggaaatcaaaattatttattgccgcgaaataataatgtaaataaccaACAAGCATCTCCAGTTAAAcggattatttataatgataataacttgacTGACGTTATGGAGCACGTTAAAAGTAAAGTAGCATCATCAAACGGCGAAATTCCGTTACtcgttgataaattattagGCGGTGGTTATAGCCCATTATTGCAACATAGAACTAATGGAATTAAACAACCATCACATATTCCACCCACTCAAAGCCCAGACTCAGCTATACATTCTTGTTGCTCTCCTGCACAGTCACCGATCACTTCAAGACATAATCCTCCATCATCTTCAGGGTTTTCATCCCCTTCTACATTTACACCATCATCATTGTCGAGAAATAATAGTGATGCATCTCAGTATGGCGGATCACAACATAGTTCTTGTTATAGTCAAAGttattccTCAGTATCCGTTTCACCCACCCAATTCTCTCCAACACAATCACCAATCCAGCCTAGACATATACAAAGAAATTTTCATGAGTATACTGTAGCAGAGGAAACTAATGGATATGAAGATAAAATAGCAATGTCAGATATTGGTCAACAACATGGCATAACATCTGGTATTTCAAGACAGCAGTTAATTAATAGtccTTGTCCAATCTGTGGAGATAAAATTTCTGGTTTTCATTATGGAATATTTTCATGTGAAAGCTGCAAAGGATTTTTTAAGCGCACTGTACAAAACCACAAAAATTATGTGTGTTTACATGGTTCAGCATGTTTAATTACAATAGCTACTCGTAAAAAGTGTCCTGCTTGTCGGTTTGACAAGTGCTTAAATATGGGTATGAAACTTGAAGCAATCAGAGTTGATAGAACTAGAGGTGGGCGTAGTACATATCCATTTACTTATACGATACCACAATCAAATATTCAGCAACAACATGGTGGACAGCACTCTGGAATGACCACTAATTCTGTTGACAATAAGGTCAAACAGGAAGAACGAGCATGTAGGACTCCACCCCAAGAAGCAGCCAGACTGATCCCTCCATTATTGCAAgaaatAATGGAAGTGGAACATTTATGGACTTATAACGAAAGCTCATTTGAATCATCAAGTGCTAGTGGAAGCTCTATGAACCATTGTGGTGGCGCCAAAGAACTAGCCAAGAGTCGTTTAATGGCTGAAAATTCAGGAACAGATTTTCTCTCTAATTTATGCAATATTGCTGACCATCGACTTTACAAAATAGTGAAATGGTGCAAATCGTTacctttgtttaaaaatatttcgATTGATGATCAAATTTCATTGTTAATAAATGCTTGGTGTGAGTTACTGCTGTTCAGTTGTTGTTACCGGTCTGTTAGCAGTCCTGGAGAGATACGGGTTAGTTTAGGCAAATCCATTTCTTTGGATCAAGCAAGAGACTTAGGCTTAGCGCCCTGTATTGAGCGAATGTTAAATTTCACTCAACATTTAAGACGATTAAGAGTTGATCGATATGAATATGTGGCCATGAAAGTCATTGTGCTATTATCATCagATACAAATGACTTGAAAGAACCAGAAAAAGTTCGTGCATCCCAAGAAAAAGCATTACATGCATTGCAGCAATATACTGTAGCACATTATCCAGATATGCCATCCAAATTTGGAGAACTATTGTTAAGGATACCTGATTTACAACGTACTTGTCAGGTTGGAAAAGAAATGCTATCAATTAAGAGTAAAGAAGGAGAAGGACAGAGTTTTAATCTTTTAATGGAGTTATTAAGAGGcgatcattaa
Protein Sequence: MANSDATMWGHSVQVSSGPVTVTSINLIAPRLPNTQITTIKEEPNEKDGTMTEIKEDNIDEVGSECDREVSKIDFSGVTMRSKKMRAVEENMPRPMSWEGELSDSEMKQDEDRIMDMQTGNQNYLLPRNNNVNNQQASPVKRIIYNDNNLTDVMEHVKSKVASSNGEIPLLVDKLLGGGYSPLLQHRTNGIKQPSHIPPTQSPDSAIHSCCSPAQSPITSRHNPPSSSGFSSPSTFTPSSLSRNNSDASQYGGSQHSSCYSQSYSSVSVSPTQFSPTQSPIQPRHIQRNFHEYTVAEETNGYEDKIAMSDIGQQHGITSGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNHKNYVCLHGSACLITIATRKKCPACRFDKCLNMGMKLEAIRVDRTRGGRSTYPFTYTIPQSNIQQQHGGQHSGMTTNSVDNKVKQEERACRTPPQEAARLIPPLLQEIMEVEHLWTYNESSFESSSASGSSMNHCGGAKELAKSRLMAENSGTDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQISLLINAWCELLLFSCCYRSVSSPGEIRVSLGKSISLDQARDLGLAPCIERMLNFTQHLRRLRVDRYEYVAMKVIVLLSSDTNDLKEPEKVRASQEKALHALQQYTVAHYPDMPSKFGELLLRIPDLQRTCQVGKEMLSIKSKEGEGQSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00340610;
90% Identity: iTF_00941576;
80% Identity: iTF_01347317;