Smay010784.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- JARID2
- Assembly
- GCA_034509805.1
- Location
- JASXSY010000638.1:95786-106207[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3 4.5e+03 -0.7 0.0 22 67 895 941 883 956 0.71 2 3 4.4e-20 1.6e-16 61.7 0.0 6 89 1454 1535 1450 1535 0.93 3 3 7.3 2.6e+04 -3.1 0.0 49 62 1549 1560 1545 1576 0.75
Sequence Information
- Coding Sequence
- ATGTCTTTGAATGGATCAGATGCAAAGAAACGTAAGCTGTTGAACAATGATGAAGCCATTCTCGATCCGAGTACAAAAAAaATCAAGGTACAAGCTCAGCGTAAATTTGCCCAAAATGCTGTGACACCCAACAGTACTCCGCAGAAACCTATTCAAACTCCCGTGGTacctaataattcaataaaaccaCCAATAAAACGACCAAATACAGAGGATTTCCTGACTTTCCTTTGTTTTAGAGGTACTAGTTTACTACCCCCACGTCTAGATTTCTTTAATAAGCCTCAACGCTCTCTATCAGCACAAGAAATTGCTGCGGgaaagaaaagaagaaaaagcaCTCCTATACTGCCAGTGACtaatgtgaataatataaataatgtgaatattgtaaataatgagCGAAGTGAAAGAAAAACCATAAAACAGTTACCACAAACTAAGTATCCATTATCTAAATTAGGACAAAAAGttattggtCGTAATCTGGTAAGATCTAGTTCAAGGTATACTGTAAGACAAGAAGCTCTTACTTTGCGTCAATTATCCCTTCGCCATGGTTCTAAAGTAATAAAACCAAAACTTAAAGTTAAAAAaccTCTAGTTGaagaaattgttaaaaaagaaacaaagaaaaatgaaaaacaagtGTCATTAGATGGTAAGGAATTACAAAAGTTGAAAGGCCGTATAACACGATCAAATTCTTTACCAAGTATATTTTCTCCTGCAATAAATCAACTTCgagatGATAAAGGTAAATGGTGTAAAGGGGATAATAAACCTTCTTCAAAAACATCTGAAGATTCAAAGGATTCAGATGATGTTGAAGAAGAAAGACCATTGAGAAAAAAGACTGcatcaaatttaaatcataGAAGTAACAGTCTTGGTAACATAAAACAAAAGACTAgtctagttaaatttaaagtaacaaACAAAAATGATAGAAAAACTAGAAGTTTAGCTAGTAAACATAAGAGTAATGATCAAGATAACTATGTCATTCCTGATAAGAATTCGAAGACTGTATCTAAGAGTAACAAAGCTAACAGTTTAGTTGAAACAAAATTTTCTTCTGGTGTGAAAAGAAGAACATCTTCTGTAGATAACATTAAAACAAGTCatgaaaataaagatttattaaattcaacTGGTTCAAGACCTCCTAGAAGAACTAAAGAAGCTGCTACTTTATTTATGGAAATGTTACGAAAAGATATGCGATGTCCTGATGAACAAGAAGATGAAACATCATCCGTGGAAAGTTTTCCTGATCTTCCGAACTCACGAATTAATGaacaacGTGAACgtgaattaaaagttttttctaaaaagaacaaaattgaaaaacaacagGATAAACAGCGGTTTGAAAATAAGGATGATAAATCTTCATTATTAGCGCTTGGTAAAAAAACTGTATTAGAGAAGAAggttaaagaaaacaaaaaatctgagattaaaacatttactaaaaaaaaagtaaaagaagTAGTAGAGGTATCGACCAATTCTGATAATGATGGGACAACTTCATTCAAAAGAAATCTAAGACCTCGCCGTTCTTCTACCATGTTAgatgattatataataactgattCAGAAGAGGATTATGATAAATGTGAATTCATATCCgagACTGAAATTGTAGTGATTACTAAAGAACCAAAAACTTCCGACGAAAGTTCGAAAAATGCCGGAAAAAAAGTGCCACTTCCTATTAAATTGCAGCAAAAGTCAGCAAAAAAGGAAAAagtctcaaaaaataaaaaatctaatttagatgtatacaacaacaataataaaaagccTTCTACAACATCGTCATCGTCGGTTGTATCTTCTTCGTCTTCCATATTTAGTGGTATTACTAGTCAATCAAAAGAAGAACTTTTAGAGTGTATGGCTGCTAATTTTGATGCCAAATCTACTACCTGTGAGGATACTAAGAAATCTACTGTTAAAAATGAAACTTCTATGACAAAAGTTGAAGACAATTCTTcagtgttagaaaaaaaaaaagaaaatgaagttGAAACAACATTGGTGCAACAATATCAGAACCACGTTCCCACAACGGAAATTGTATTCCAAGAAAAGAAAGTTGAAAATAGCATTACagctttagaaaaaaaagaaaaatgtgatACTGTTATGGATGAAAAGAAAGACCATATTCTAGAAAAATTAGAAAGTATAAAAGCTGTTGAACTCAAACAAGAGTTGAAAGTAGTTTCAAAAACAGAAAATGTAATAGCAAAAGAAGAAAATGTTACAACCCCTGGAAAAGTGGAAAATGTAGTTTTGGTTGTTGATAgggttgaaaaaaatgaatctaTTGTGGTGCCATTCAACAAAGTGGAAAAAGTAGAAAACATTGTGTTTCAGACCATTGCTAAAGATTTATTTCTTGGACAACAAAAAGAGATCAAGATCACCATGCCTGAATACttttccggtaaaaattttcaGGTTCCTAATAGATTTAAACAAGATGATGGCCTTTCTGTATTATCTGAAATCTGTAGTGCCTTACCTAGATTTAATGAACCCTTTGTACCTAATGGTCAGCTGATAAATAAATTGCCGACTACTGTTGAAAGTAGTTTTGCAAAGTATACTTCACCCTTGATTAATAGTGATGAGAAGAAAGAAGATAAACCTATTATGTCAACGTTGACACCACCATCTTTTGAAAGCCGTACCATGAAAATGGTGAATTTGGCTAGAGAAAACAAAACTATATCTGGAGCAAATGACAAAAAAGATTTGACTGCATCGTGGAGACAggcttttaaaaatgtaaaattgcccAAAAATGGACTAGCTTTAACTGCTTATTCAGCTGGTAATAATTTGATCTcttggaaaaagaaaaaacatgatGACAATCAAACATTGCCACAGAAAATCTATACAGAAAATGTGGATGACAATAGCAATGATGAAGCAAAGGAAATCATTACTGATAATGATTTAGTCAAAACCTCTTTCCAATCATCTTTAGTTAATGGTAGTacagttgaaaataaattggaatCTTCTCAACTGTGTCAAAAGACTCATTGTAGTGAATTGAAAACAACTGATGTGTTGGATAGTAAAAAGACAGTGGGAACAGTAGCTAACAATGCATCATATTTGGCCAAAAGAACTATACTAAATAGTACGAAATATGATTTGAAGTTCGAAAAACGTTCTGCTACAGCAGTTGTGCCAACGTCTGATTTAGTTACTGAAGAAAAACAACAACGTAAAGACATAATTGGTGATGTATCATCTTCAGATGATTTGAGTccagaaaaaaagatttttcatcAACGTCGATTGTCCACCAATCAGTCGTGTAGCGGAAACAGTTCTGATGCATTTTCTCCAGACAATGAGACAAGTGTTTATGCTTTTCAACCTGATTTGCCGGTAGCTAGTACTCCTTTCCGCCGAAATAAACCACAGTCACCCGCCAAGTCGAGAACAGTATCACCAAACACATCCATTGCTGTGAGTATAGAAAATGATTCTACGGAGGAAAAATCTCATCATTCTACTGTATCATCAACAACAGATGTTGACAGTGAGGAAGGACGGTTGTTTTATATCCCTTTGCCAGCTGGAGTACAAGCTCAACCTTTGATCCAGGGAGTGACAGTTAAATTGGGCACACAAGGACCACAAAACAAATTAGTGATGAGTGCCAAGTTAGTCACCAAACCTCCAGCATCTACAATACCAGTTAGttCTATATCACCGAAACCGGAGCGAAAAATTAAGCCACTATGTACAACCAAAATTTCCAACAGCATGACTCCTGTTGGTACTGTACAGCCAACCACTCGATCTGTTCAACCCACTAAAAGTACTCCCTCGACTTCGAAACATGTGTTACCATTACCACTACAACCAGAGATCCTGGAAACTAAAGATGAAAAGAAACGGTTACAACAAGTTACTAATATTTCTgccacaaaaaataacacttctaaggaatcaaaaaaaatgtctatatctTCATTGTCTTCTGTCTCTGGCTCTGGCTctgataataagaaatttaaaaagactgaaaaacaaattaataacaagAGAAAGTCTAGCGAAAAATTGACTTCTAAGAAGAAAAAAGAATGTGCAGACATGATGGATGCACCAACATTTTACCCGTCTGAGGAAGACTTCAAGGATCCACTTgaatactttgaaattattaagCCTGTTGCCAAAAAATATGGTATATGTAGGGTTGTACCACCTCCTAGTTTTAAGccGGAATGTAAAGTTAGTGACGATATGCGGTTCACAGCCTATAATCAATTTGTTCACAAAATGATGAATCGTTGGGGCCCAAATGTCCGTGAAATGATGGCcatgaagaaatatttaaaaacacagtCTATAGTATTTTCTAATCCCCCACTGATTGGTGGCATGGAATTGGATTTACCTAGGCTTTATCATACTGTTCAAGACCTTGGTGGGCTAAAAGAAGTAATAGAGTTAGATAAATGGTGTCGTGTTGCAGATTTGATGAAGATACCTAAAAGTGCCCAAGATCGAGTTTCTAAACTTGATGACATATACTGCAAGTATTTGCTGCCATATGATACTCTTTCACATGAGGAACGACAAAAATTAATTGCTGAAGTTGACAAAGAATGGAAACAGATCTGTAAAAAAGGTGACTCTGACAATGAACTGTTTGAAGATGTCAGTGATTGCATAACGAAGgGTCGTAGTATAGCACTGAGTGCTTATTATAGAGTGGCTCGCAATACTGTTGCAATGTGGTTCAAAGAACACCAACAGCAACAGCCGCAGGGTAGTGGTAACTCATCATTGTCATCTAAGATGGGTGCTGCTGCAGTCCGAGCTGAAGATGTTGAATCTTTCTATTGGAAGCAGGTGCAAGAGAAGAAGAATCATATATGTGTACTTTCAGGTTCAATAGATTCAGGGGCTGAGGGCTATGGGTTTCCGACGACTAAGACTGCCACATTTACCAAACATCCATGGAATTTAAAGGTTTTGACTAATAATCCAGTATCTGTGCTCAAGTCTCTTGGTCCAGTCATGGGCATGACTGTACCTACCATACACATGGGTATGGTGTTCTCAGCATGTTGTTGGTACAAAGATCCACATGGTTTGCCATGGATTGAGTACTTACATACAGGTGCTGATAAGGTGTGGTATGGTGTGCCATCCTCCCAGAGTGATAAGTTTCGTGCAGCCATGAAACGGCTGTTGCCTCGAGCTGTGGCCGAAGGACAAAACCATCACACTTGGCTAGCTGCTGATAGTGGTATGGTGCCACCTGATCGCTTACTAGAGCATGGTGTTACGCTTACTCGAACTGTGCAGAACCCAGGCCAGTTTTTGATTGTTATGCCACGAGCTTATACATGTAATGTGTCTACTGGATATGTTATATCTGAAAGTGTCTACTTTACTCAGTCTGGTTGGCTTAATGATTCAGAGAAAATTTTTCAGgaTTTGCAAAGAAACTGTGAACCAGCTGCTTTTTCATatgaaaagttattaattaacatgTCTATGGATCCTCGTACACCTCAAAAATTACTGAAACAGCTACTAAACATATTAAGCAACATGAGAGATTGCGAAGTAGCACTCAGGAGTCAATTAGTAGAGGATTTGGGTTTAAAGGTGTCTGAACGTATTCGGCCATCTAAGTCAAATGAACAAAATGATGATTATGAGTGTGACGTATGCCATTCAATTCTTTACATATcaatgGTAAACAACTCTCATGAGGACTGTGACTATTGTTTGAGACACGGCATTgaaatgttatcaaaaaaacataatcaaCTCAAGTATTGCAAGTTTTTGTACACTTTAGATGAGGTGAGTAATTATCAACTAGTGTATTAA
- Protein Sequence
- MSLNGSDAKKRKLLNNDEAILDPSTKKIKVQAQRKFAQNAVTPNSTPQKPIQTPVVPNNSIKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAQEIAAGKKRRKSTPILPVTNVNNINNVNIVNNERSERKTIKQLPQTKYPLSKLGQKVIGRNLVRSSSRYTVRQEALTLRQLSLRHGSKVIKPKLKVKKPLVEEIVKKETKKNEKQVSLDGKELQKLKGRITRSNSLPSIFSPAINQLRDDKGKWCKGDNKPSSKTSEDSKDSDDVEEERPLRKKTASNLNHRSNSLGNIKQKTSLVKFKVTNKNDRKTRSLASKHKSNDQDNYVIPDKNSKTVSKSNKANSLVETKFSSGVKRRTSSVDNIKTSHENKDLLNSTGSRPPRRTKEAATLFMEMLRKDMRCPDEQEDETSSVESFPDLPNSRINEQRERELKVFSKKNKIEKQQDKQRFENKDDKSSLLALGKKTVLEKKVKENKKSEIKTFTKKKVKEVVEVSTNSDNDGTTSFKRNLRPRRSSTMLDDYIITDSEEDYDKCEFISETEIVVITKEPKTSDESSKNAGKKVPLPIKLQQKSAKKEKVSKNKKSNLDVYNNNNKKPSTTSSSSVVSSSSSIFSGITSQSKEELLECMAANFDAKSTTCEDTKKSTVKNETSMTKVEDNSSVLEKKKENEVETTLVQQYQNHVPTTEIVFQEKKVENSITALEKKEKCDTVMDEKKDHILEKLESIKAVELKQELKVVSKTENVIAKEENVTTPGKVENVVLVVDRVEKNESIVVPFNKVEKVENIVFQTIAKDLFLGQQKEIKITMPEYFSGKNFQVPNRFKQDDGLSVLSEICSALPRFNEPFVPNGQLINKLPTTVESSFAKYTSPLINSDEKKEDKPIMSTLTPPSFESRTMKMVNLARENKTISGANDKKDLTASWRQAFKNVKLPKNGLALTAYSAGNNLISWKKKKHDDNQTLPQKIYTENVDDNSNDEAKEIITDNDLVKTSFQSSLVNGSTVENKLESSQLCQKTHCSELKTTDVLDSKKTVGTVANNASYLAKRTILNSTKYDLKFEKRSATAVVPTSDLVTEEKQQRKDIIGDVSSSDDLSPEKKIFHQRRLSTNQSCSGNSSDAFSPDNETSVYAFQPDLPVASTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSTEEKSHHSTVSSTTDVDSEEGRLFYIPLPAGVQAQPLIQGVTVKLGTQGPQNKLVMSAKLVTKPPASTIPVSSISPKPERKIKPLCTTKISNSMTPVGTVQPTTRSVQPTKSTPSTSKHVLPLPLQPEILETKDEKKRLQQVTNISATKNNTSKESKKMSISSLSSVSGSGSDNKKFKKTEKQINNKRKSSEKLTSKKKKECADMMDAPTFYPSEEDFKDPLEYFEIIKPVAKKYGICRVVPPPSFKPECKVSDDMRFTAYNQFVHKMMNRWGPNVREMMAMKKYLKTQSIVFSNPPLIGGMELDLPRLYHTVQDLGGLKEVIELDKWCRVADLMKIPKSAQDRVSKLDDIYCKYLLPYDTLSHEERQKLIAEVDKEWKQICKKGDSDNELFEDVSDCITKGRSIALSAYYRVARNTVAMWFKEHQQQQPQGSGNSSLSSKMGAAAVRAEDVESFYWKQVQEKKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSSQSDKFRAAMKRLLPRAVAEGQNHHTWLAADSGMVPPDRLLEHGVTLTRTVQNPGQFLIVMPRAYTCNVSTGYVISESVYFTQSGWLNDSEKIFQDLQRNCEPAAFSYEKLLINMSMDPRTPQKLLKQLLNILSNMRDCEVALRSQLVEDLGLKVSERIRPSKSNEQNDDYECDVCHSILYISMVNNSHEDCDYCLRHGIEMLSKKHNQLKYCKFLYTLDEVSNYQLVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346256;
- 90% Identity
- -
- 80% Identity
- -