Sflv011378.1
Basic Information
- Insect
- Sipha flava
- Gene Symbol
- JARID2
- Assembly
- GCA_003268045.1
- Location
- NW:2661885-2675387[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 2.2e+03 -1.4 0.0 28 68 1003 1041 985 1053 0.66 2 3 2.8e-20 4.9e-17 61.6 0.0 6 89 1546 1627 1542 1627 0.93 3 3 4.1 7.4e+03 -3.1 0.0 49 62 1641 1652 1637 1668 0.75
Sequence Information
- Coding Sequence
- ATGTCTTTGAATGGATCAGATGCAAAGAAACGCAAGCTGTTGAACAATGATGAAGCCATTCTCGATTCGAGTACAAAAAAAATCAAGGTACAAGCTCAGCGTAAATTTGCTCAAAATGCTGTGACACCCAACAGTACTCCGCAGAAACCTATTCAGACTCCTGTGGTacctaataattcaataaaaccaCCAATAAAACGACCAAATACAGAGGACTTTCTGACTTTCCTTTGTTTTAGagGTACTAGTTTACTACCACCACgtctagatttttttaataagcctCAACGCTCTCTATCAGCACATGAAATTGCTGTTGgaaagaaaagaagaaaaagtacTCCTATACTGCCAGTAActaatgtgaataatataaataatgttaatgttgtaaataatgAGCCAAGTGAAAGAAAAACCATAAGACAGTTACCACAAACTAAGTATCCGTTATCTAAGTTAGGACAAAAAGttattggtCGTAATCTGGTAAGATCTAGTTCAAGGTATGCTGTAAGACAAGAAGCTCTTACTTTGCGTCAATTATCCCTTCGCCAtggttctaaaattaaaaaaccaaagcTTAAAGTTAAAAAacCTCTAGTTGAAGAAATTGtcaaaaaagaaacaaaaaaaaatggaaaacaagTGTCATTAGATGGTAAGcaattacaaaaattgaaaGGTCGTATAACACGATCAAATTCTTTACCAAGTATATTTTGTCCTGCAATAAACCAACTTCGagATGATAAAGGTAAATGGTGTAAGGGGGACAATAAACCTTCTTTAAAAACATCGGAAGATTCAAAGGATTCAGATGATATTGAAGAAGAAAGACCATCGAGAAAAAAGACTGcatcaaatttaaatcataGAAGTAACAGTCTtggtaatataaaacaaaagacTAGTCTAGTTAAAGTAACCAACAAAAATGACAGAAAAACTAGAAGTTTAGCTAGTAAACATAAGAATAATGATCAAGATAATTATGTCATTCCTGATAAGAAATATGATAAGAATTTAAAGACTGTATCTAAGAGTAACAAAGCTAACAgtttaattgaaacaaaattgTCTTTTGATGTGAAAAGAAGAACATCTTCTGTAGATAACATTAAAACAAGCCATGAGAATAAAGATTTATCGAGttcaacTCGTTCAAGACCTCCTAGGAGAACTAAAGAAGCTGCTACTTTATTTATGGAAATGTTACGAAAAGATATGCGATGTGCTGATGAGCAAGAAGATGAAACATCATCCGTGGAAAGTTTTCCTGATCTTCCAAATACACGAATTAACGaacaacgTGAACGTGAATTGAAAGTTTTTTCtaaaaagaacaaaattgaaaaacaacagGAAAAACAGCGGCTTGAAAATCAGGATGATAAATCTTCATTATTAGtgcttgataaaaaaaatgtagtagaaAAGAAggttaaagaaaacaaaaaatctgagattaaaacattttctaaaaaaaaaatcaaaaaaatagcaGAGGTGTTGGTCAATTCTGATAATAATGGAACAACTTCATTCAAAAGGAATCTAAGGCCTCGCCGTTCTTCTACCATGCTGGACGATTATATAATAACTGATTCAGAAGAGgattatgataaatttgaattcatatccgaggtaaataaaaatgaaacccCCAAACCATCAATAAAAGTAACGACTGCGGGGATttctaaaatacaaaatcatataattagTACTGAGGaatctgcaaaaaaaaattttaaaattaataagactGACTTGAAACTGAAAAaagatttgaataaaatagattctgaaataaaaaagagTCTTTCTGAAACtaagtcaaaaaatattttattaaaatacgataAAGAGCctgaaatcaagaaaaataaatatgctactGTTGACCAAAAAATTGagaaattgtcaaaaaataagACTGAAAATGTAGTAATTACTAAAGAACCAAAAACTTCTGACAAGGGTTTGAAAAGTGTTGGGAAAAAAGTGCCACTTTCTATTAAATTGCAGCAAAAGTCAGCAAAAAAGGAAAAAGTCTCAAAagataaaaaatctaatttagatttatacaacaataacaataaaaagccTTCTACAACATTGTCATCATCGGTTGTATCTTCTTCGTCTTCCATATTTAGTGGTATTACTAGTCAATCAAAAGAAGAACTTCTAGAGCGTATGGCCGCTAATTTTGATGCCAAATCTACTGCCTGTGAGGACACTAAGAAATCTACTGTTAAGAATGAAACTTCTTTGAAAAAAGTTGAGGACAATTCTATtgcgttagaaaaaaaaaaagaaaatgaagtTGAAACAACATTGCTGCAACAATATGAGAGCTACATTCCTacaacagaaatattatttcgagAAAAGAAAGTTGAAAATAGCAatatagttttagaaaaaaaagaaaaatgtgatACCGTTGACAATAAAAAAGAAGACCATATTGTAGAAAAATTAGAAAGCATAAAAGCTGTTGAACTCAAACAAGAGTTGAAAGTAGTttcaaaaacagaaaatatagTAGCAAAAGAAGAAAATGTGGCAACCCCTAGAAAAGTGGAAAATGTAGTTTTGGTTGTTGATAGGGTTGAAAAAACCGAATCTATAATGGTGCCATTCAATAAAGTGGAAAAAGTAGAAAACATTGTGTTTCAGACCATTGCTAAAGATTTATTTCTTGGACAACAAAAAGAGATCAAAATCACCATGCCTGAGTACTTTTCAGGTAAAAACTTTCAGGTTCCTAATAGATTTAAACAAGACGATGGCCTTTCTGTATTATCTGAAATCTGTAGTGCCTTACCTAGATTTAATGAACCATTTGTACCTAATGGTCAGctgataaataaatatccaaCTACTAGTGAGAGTAGTTTTGTAAAGTATACATCATCCTCAATTAGTAGTGATGAGAAGAAAGAAGATAAATCTGTTTTGTCAACGTTGACTCCACCATCTTTTGAAAGCCGTACCATGAAAATGGTTAATCTGGCTAGGGAAAACAAAACTGTAACTAGGACAAATGACAAAAAAGATTTGACTGCATCGTGGAGGCAggcttttaaaaatgtaaaattgccAAAAAACAATCTTGCTTTAGCTTCCTATTCATCTGGTAACAATTTGATCTCTTGGACAAAGAATAAACATGATGACAATCAAACATTACCACAGGTTTGTACTGATAATGTGGATGGCAATAGCAATGGTGAAGTAAAGGAAATCATTACAGATAATGATTTAGTCAAAACCACTTTTCAATCATCTTTGGTCAATGGTAGTACAGCTGAAAATAAATTGGAATCTTCTCAACCGTGCCAAAAGACTTATTGTAGTGAATCAAAAACAACTGATGTGTTGGATAGTAAAAAGACAGTGGCTAACAATGCATCATACTTGGCAAAAAGAACTTTACTGAATAGTACAAAATatgatctaaaatttgaaaaacattctGCAACAGCAGTTGTGCCAACAACTGTTTTAGTTACTGAAGAAAAACAACAACGTAAAGACGTAGTTAGTGATGTATCGTCTTCAGATGATCTGAGTCCAGAAAAAAAGATCTTTCATCAACGTCGATTATCCACTAATCAGTCGTGCAGCGGAAACAGTTCTGATGCATTTTCTCCAGACAATGAGACAAGTGTTTATGCTTTTCAACCCGATTTACCAGTAGCTAGTACTCCTTTCCGCCGAAATAAACCACAGTCACCCGCCAAGTCGAGAACAGTTTCACCAAACACATCCATTGCTGTTAGTATAGAAAATGATTCTATGGAGGAGAAATCTCATCATTCTACTGTATCATCAACAACGGACGTTGACAGTGAGGAAGGACGGCTGTTTTACATTCCTTTGCCAGCTGGAGTTCAAGCTCAACCTTTGATCCAGGGAGTGACAGTCAAATTGGGCACACAAGGACCACAAAACAAGTTAGTAATGAGTGCCAAGTTAGTCACCAAACCTCCAGCATCCACAATACCAGTCAGttCCATATCACCAAAACTGGAGCGAAAAATTAAGCCACTGTGTACAAACAAAATTTCCAACAGCATGACACCTGTCGGTACTGTACAGCCAACCACTCGATCTGTTCAACCCACTAAGAGTACTCCCTCAACTTCGAAACAAGTGTTACCATTATCACTACAACCAGAGATCCCGGAAGTAAAAGATGAAAAGAAACGGTTACAACAAGTTACTAATATTACTGCCACAAAAAATAACACTTCTAAGGAATCAAAAAAAACGTCAGTATCATCATTATCTTCTGTCTCTGGCTCtgataataagaaatttaaaaagacTGAAAAACACATTAATAACAAGAGAAAGTGCAGCGAAAAATTAGCTTCTAAGAAAAAAGAATGTGCAGACATGATGGATGCACCAACATTTTATCCGTCTGAGGAAGACTTTAAGGACCCACTTGAGtactttgaaattattaagCCTGTTGCCCGAAAATATGGTATATGTAGGGTTGTACCACCTCCTAGTTTTAagccTGAATGTAAAGTTAGTGATGATATGCGGTTCACGGCCTATAATCAATTTGTTCACAAAATGATGAATCGGTGGGGTCCAAATGTCCGTGAAATGATGGCgatgaagaaatatttaaaaacacagtCCATAGTATTTTCCAATCCCCCGCTTATTGGTGGCATGGAATTGGATTTGCCTAGGCTTTATCATACTGTCCAAGACCTTGGTGGTCTGAAAGAAGTGATAGAGTTGGATAAATGGTGTCGTGTTGCAGACTTGATGAAGATACCCAAAAGTGCCCAAGACCGTGTCTCGAAACTTGATGATATTTACTGCAAGTATCTGCTACCCTATGACACTCTTTCACATGagGAACGACAAAAATTAATTGCTGAAGTTGACAAAGAATGGAAACAGGTCTGTAAAAAAGGTGACTCTGACAATGAACTGTTTGAAGATGTCAGTGATTGTATAACAAAGgGTCGTAGTATTGCATTGAGTGCTTATTATCGAGTGGCTCGCAATACTGTTGCCATGTGGTTCAAagaacagcaacaacaacagccGCAGGGTAGTGGTAACTCATCTCTGGCATCTAAAATGGGTGCTGCTGCGGTCCGAGCTGAAGATGTTGAATCTTTTTATTGGAAGCAGGTGCAAGAGAAGAAGAATCATATATGTGTCCTTTCAGGTTCGATAGACTCAGGCGCTGAGGGTTATGGGTTCCCGACGTCTAAGACTGCCACATTTACCAAACATCCTTGGAATCTAAAGGTTTTGACCAATAACCCAGTATCTGTGCTCAAGTCTCTTGGTCCAGTTATGGGCATGACTGTACCTACCATACACATGGGTATGGTATTCTCAGCCTGTTGCTGGTACAAAGACCCACATGGTTTGCCATGGATTGAGTACTTACATACAGGTGCTGATAAGGTGTGGTATGGTGTGCCATCCTCCCAGAGTGATAAGTTTCGTGCAGCAATGAAACGGCTGTTGCCGCGAGCTGTTGCTGAGGGACAAAACCATCACACTTGGTTGGCTGCTGATAGTGGCATGGTGCCGCCTGATCGCTTACTAGAGCATGGTGTTACGCTTACTCGAACTGTGCAGAATCCAGGCCAGTTTTTGATTGTTATGCCACGAGCTTATACATGTAATGTGTCTACTGGATATGTTATATCGGAGAGTGTCTACTTCACTCAGTCTGGTTGGCTTAATGATTCAGAGAAAATTTTTCAGgaTTTGCAAAGAAATTGTGAACCAGCTGCTTTTTCATatgaaaagttattaattaacatGTCTATGGATCCTCGTACACCTCAAAAATTACTAAAGCAGctaCTAAACATATTAAGCAACATGAGAGATTGTGAAGTAGCACTCAGGAGTCAGCTAGTAGAAGATTTGGGTTTAAAGGTGTCTGAACGTATTCGGCCTTTGAAATCAAGTGAACAAAATGATGATTATGAGTGTGACGTATGCCATTCAATTCTTTACATatcaatgGTAAACAACTCTCATGAGGATTGTGACTATTGTTTGAGACACGGCATTGAAATGTTATCGAAAAAACATAATCAACTCAAGTATTGcaagtttttatatactttagatGAGATGGAATTGGATTCAATATTGGTGAAACTGCGTGAGAGAATTGATTCAAAGAAAAAGAAGACGTCTACCAAAAGTTGA
- Protein Sequence
- MSLNGSDAKKRKLLNNDEAILDSSTKKIKVQAQRKFAQNAVTPNSTPQKPIQTPVVPNNSIKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAHEIAVGKKRRKSTPILPVTNVNNINNVNVVNNEPSERKTIRQLPQTKYPLSKLGQKVIGRNLVRSSSRYAVRQEALTLRQLSLRHGSKIKKPKLKVKKPLVEEIVKKETKKNGKQVSLDGKQLQKLKGRITRSNSLPSIFCPAINQLRDDKGKWCKGDNKPSLKTSEDSKDSDDIEEERPSRKKTASNLNHRSNSLGNIKQKTSLVKVTNKNDRKTRSLASKHKNNDQDNYVIPDKKYDKNLKTVSKSNKANSLIETKLSFDVKRRTSSVDNIKTSHENKDLSSSTRSRPPRRTKEAATLFMEMLRKDMRCADEQEDETSSVESFPDLPNTRINEQRERELKVFSKKNKIEKQQEKQRLENQDDKSSLLVLDKKNVVEKKVKENKKSEIKTFSKKKIKKIAEVLVNSDNNGTTSFKRNLRPRRSSTMLDDYIITDSEEDYDKFEFISEVNKNETPKPSIKVTTAGISKIQNHIISTEESAKKNFKINKTDLKLKKDLNKIDSEIKKSLSETKSKNILLKYDKEPEIKKNKYATVDQKIEKLSKNKTENVVITKEPKTSDKGLKSVGKKVPLSIKLQQKSAKKEKVSKDKKSNLDLYNNNNKKPSTTLSSSVVSSSSSIFSGITSQSKEELLERMAANFDAKSTACEDTKKSTVKNETSLKKVEDNSIALEKKKENEVETTLLQQYESYIPTTEILFREKKVENSNIVLEKKEKCDTVDNKKEDHIVEKLESIKAVELKQELKVVSKTENIVAKEENVATPRKVENVVLVVDRVEKTESIMVPFNKVEKVENIVFQTIAKDLFLGQQKEIKITMPEYFSGKNFQVPNRFKQDDGLSVLSEICSALPRFNEPFVPNGQLINKYPTTSESSFVKYTSSSISSDEKKEDKSVLSTLTPPSFESRTMKMVNLARENKTVTRTNDKKDLTASWRQAFKNVKLPKNNLALASYSSGNNLISWTKNKHDDNQTLPQVCTDNVDGNSNGEVKEIITDNDLVKTTFQSSLVNGSTAENKLESSQPCQKTYCSESKTTDVLDSKKTVANNASYLAKRTLLNSTKYDLKFEKHSATAVVPTTVLVTEEKQQRKDVVSDVSSSDDLSPEKKIFHQRRLSTNQSCSGNSSDAFSPDNETSVYAFQPDLPVASTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSMEEKSHHSTVSSTTDVDSEEGRLFYIPLPAGVQAQPLIQGVTVKLGTQGPQNKLVMSAKLVTKPPASTIPVSSISPKLERKIKPLCTNKISNSMTPVGTVQPTTRSVQPTKSTPSTSKQVLPLSLQPEIPEVKDEKKRLQQVTNITATKNNTSKESKKTSVSSLSSVSGSDNKKFKKTEKHINNKRKCSEKLASKKKECADMMDAPTFYPSEEDFKDPLEYFEIIKPVARKYGICRVVPPPSFKPECKVSDDMRFTAYNQFVHKMMNRWGPNVREMMAMKKYLKTQSIVFSNPPLIGGMELDLPRLYHTVQDLGGLKEVIELDKWCRVADLMKIPKSAQDRVSKLDDIYCKYLLPYDTLSHEERQKLIAEVDKEWKQVCKKGDSDNELFEDVSDCITKGRSIALSAYYRVARNTVAMWFKEQQQQQPQGSGNSSLASKMGAAAVRAEDVESFYWKQVQEKKNHICVLSGSIDSGAEGYGFPTSKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSSQSDKFRAAMKRLLPRAVAEGQNHHTWLAADSGMVPPDRLLEHGVTLTRTVQNPGQFLIVMPRAYTCNVSTGYVISESVYFTQSGWLNDSEKIFQDLQRNCEPAAFSYEKLLINMSMDPRTPQKLLKQLLNILSNMRDCEVALRSQLVEDLGLKVSERIRPLKSSEQNDDYECDVCHSILYISMVNNSHEDCDYCLRHGIEMLSKKHNQLKYCKFLYTLDEMELDSILVKLRERIDSKKKKTSTKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346869; iTF_01169641;
- 90% Identity
- -
- 80% Identity
- -