Smay019715.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- grh
- Assembly
- GCA_034509805.1
- Location
- JASXSY010001251.1:199224-232610[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.2 8.3e+03 -3.0 2.2 103 130 194 220 188 236 0.51 2 2 4.2e-63 1.8e-58 198.7 0.0 26 221 487 677 473 679 0.93
Sequence Information
- Coding Sequence
- ATGGCCGATTCGGAAACGAACGGTGGCGGCGCCGggggcggtggcggcggtgcCGTGGCCGAGCAGCCCGCCGAGCCCGGTGGCTGGAGGCAGTCGTACTACGAGCACCCGCTGACCGCGGCCACGTCGGCCATGCTCAACATATCGGGCGGCGCCGCCGGCGACGAACAGGGCCAACAGTCCGGTCACGGACAGGGCCAGGGAGGCGCGCCGCTCAGCTTCGTCTACGAGTATTACAAGCTACCGCATCTGACCGCTTCCGACGGCGTCAAGGACAAGCAGCTTGCCGACATATGGCCAACAACGTCTTCGCCTAACGGTTCGTTGTTGCCTTCCCAACTCAAACCGTCCAACGGACTTATCGGCACCGGGGGTTCCGGAGGCTTGGAGATCGGCGCTGGACAGCTGAGCGACTTGCAAGGACTTTTCCTGCACCAGCAGCCGCTTAAGCGCGAGCCCGAGGATCTGAGCCATCATCGCGGCGGGCCGAACAAAGGTGGCAATGCGGACGGGCTGAAGACCATCGGAGGACGGCCTAAAGTCGTGTTGGTCGCGCCGGGTAACAGCggccagcagcagcagcagcagcagcaggacCAGCAGCAACTGGTCGTGGACGTTgtgaacaacaacaacagccaGCAgaccaacaacaacaacaacaataacaacaacagcgTGAAAGAGGAGTACGTGAGCGGGCACCATTCGCCGCAGCACAACAGCCGGTCGATAAACGGCACGCCGTCGTCCACGTCGTCGCTCATCACCGAGATGAACCCGCCACCGCCGGCCATCGAACTGATCGCCACGCAGGACGGCCTGAAGCCCATGTACGGCACGCACATATTCACCACCATGTCCGGACAGCACGGTGACAGCGGCGCGGCGTCGGCCAACGCGTACGAGCACCAGCAGTACACCACGTCGTCCGTCCTgaccggcggcggcggcggtgccGGCAACCCGGGCAACTACATCACCACGTCCGCCGGCCGCGCGCCGTTCGCCGACCCGTACGCGTACCGCGAGTACTTCGGCAGCGCCGGCGCGGCCGCCGAGCCCGGCCCTTACGGCACGCAGATCGGGGGCGGCCGGCAGACCGCTTCCTACGGCGGCGACGCGTCCGACCCCGGTTCTGTGTCCAACGCCGCGGCCACCGCGTCGTTCGTCGAGCGCTACGTCCGGCAGAGCTCGTACCACAACAAGGGCGTGATCGCCGCAGCCGGGCTCACCGTCGACCTGCCGTCGCCCGATAGCGGCATCGGCGCCGACGCCATCACGCCCAGGGACCAGAACGCCATCCAACAGtctttCGACTACAACGAGATGTGCCAAACGCCAGGTATGTTGAGCGAACACCAAGCACAAAGGACACCTACAGGAGGACGGTCGAGACCATGGCACGATTTTGGTAGGCAAAACGATGCCGACAAAATACAAATACCAAAATTGTTTTCCAACTATGGGTTCCGCTATTATTTGGAATCGCCGATCTCTACAAACCAGAGGCGCGAAGACGACCGGGTGACGTACATCAACAAAGGCCAGTTCTACGGCATAACAATGGAGTACGTACCCGATCCGGACAAACCGTTGACCAGTCAAACAGTCAagAGTGTGGTCATGCTGATGTTCAGGGAGGAAAAAAGTCCCGACGATGAGATCAAAGCGTGGCAGTTTTGGCACGGCAGGCAACACAGTGTTAAACAACGAATACTCGATGCCGACACGAAAAATAGTGCCGGTCTGGTGGGATGCATCGAAGAAGTATCACACAATGCCATCGCCATTTATTGGAACCCTATGGAGAGTCCGGCAAAAatcAATGTTGCCGTGCAATGTCTGAGTACGGATTTCAGCAGCCAAAAAGGCGTAAAGGGTTTGCCGCTGCATCTGCAAATTGATACCTACGAAGAACCGAGGGACGGACCTGTGTATCACAGGGGATATTGTCAAATCAAAGTTTTCTGTGATAAggGAGCTGAAAGAAAGACCAGGGATGAGGAGCGGAGAGCGGCAAAACGAAAAATGACTGCTACAGGACGCAAGAAGATCGACGAACTTTATCATCCGCCGTGCGAAAGGTCCGAATTCTATTCGATGAGCGACCTCAATAAACCGCCTGTGCTTTTCTCGCCCGCCGAAGACATTGACAAGCTAACGTCGATGGAGCTCCAAGGATTCTACGGTCACGACACGGATACGTCCAGCTTGTCCAACGGCGAACCCGGCTCCCTAAAGCACTCGTCGCCGTTCCTGTTGCACTCCGGCGTGGCCAACAAGCCGGCCGGCACGACCACCACGCAAACGCTGAAGTTCCACAATCACTTCCCGCCGGACACGCACAACGAGAAGAAAGAAGTGCTGGACCAGAGCGGGCTGACCACGGACGGCACGGTGTTCTCGAGTCCGCCCAACAAAAGGACGAAACTAGTGCCACCCATCAACGAGCGAGTGATGCTGTACGTACGGCAGGACGCCGAGGACGTGTACACACCCCTGCATGTCATACCGCCGACGACCCAGGGATTATTGAATGCTATTGAGGCTAAGTACAAAATTTCTGCTTCCAGCATTAGTAACATGtatcgaaaaaacaaaaaaggGATTACAGCCAAAATTGATAACGATATgctcaaatattattgtaatgaagATTCATTTGTATTGGAAGTCAGGCACTCCGAAGAAAATGAGAACATGCTTGATATCATACTAATTGAATTTATGGACCATTAA
- Protein Sequence
- MADSETNGGGAGGGGGGAVAEQPAEPGGWRQSYYEHPLTAATSAMLNISGGAAGDEQGQQSGHGQGQGGAPLSFVYEYYKLPHLTASDGVKDKQLADIWPTTSSPNGSLLPSQLKPSNGLIGTGGSGGLEIGAGQLSDLQGLFLHQQPLKREPEDLSHHRGGPNKGGNADGLKTIGGRPKVVLVAPGNSGQQQQQQQQDQQQLVVDVVNNNNSQQTNNNNNNNNNSVKEEYVSGHHSPQHNSRSINGTPSSTSSLITEMNPPPPAIELIATQDGLKPMYGTHIFTTMSGQHGDSGAASANAYEHQQYTTSSVLTGGGGGAGNPGNYITTSAGRAPFADPYAYREYFGSAGAAAEPGPYGTQIGGGRQTASYGGDASDPGSVSNAAATASFVERYVRQSSYHNKGVIAAAGLTVDLPSPDSGIGADAITPRDQNAIQQSFDYNEMCQTPGMLSEHQAQRTPTGGRSRPWHDFGRQNDADKIQIPKLFSNYGFRYYLESPISTNQRREDDRVTYINKGQFYGITMEYVPDPDKPLTSQTVKSVVMLMFREEKSPDDEIKAWQFWHGRQHSVKQRILDADTKNSAGLVGCIEEVSHNAIAIYWNPMESPAKINVAVQCLSTDFSSQKGVKGLPLHLQIDTYEEPRDGPVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKIDELYHPPCERSEFYSMSDLNKPPVLFSPAEDIDKLTSMELQGFYGHDTDTSSLSNGEPGSLKHSSPFLLHSGVANKPAGTTTTQTLKFHNHFPPDTHNEKKEVLDQSGLTTDGTVFSSPPNKRTKLVPPINERVMLYVRQDAEDVYTPLHVIPPTTQGLLNAIEAKYKISASSISNMYRKNKKGITAKIDNDMLKYYCNEDSFVLEVRHSEENENMLDIILIEFMDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308602;
- 90% Identity
- iTF_00135076; iTF_01304620; iTF_01305306; iTF_00134004; iTF_01169620; iTF_01432794; iTF_00468732;
- 80% Identity
- -