Rpad023991.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- grh
- Assembly
- None
- Location
- scf7180000007846.2055809:1272830-1306840[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-63 1.3e-58 198.4 0.0 26 221 491 681 477 683 0.93
Sequence Information
- Coding Sequence
- ATGGCCGATTCGGACACGAACGGTGGTGGTGGCGCCGGGGGCGGAGGAGGCGGCGGCGGCGGCGGGGGTGGCGGCGTGACCGAACAACCCGCCGAGCCGGGTGGCTGGAGGTCGTCGTACTACGAACATCCGCTGACCGCCGCCACGTCGGCCATGCTCAACATTTCGGGCGGCGCTGCCGGGGACGAACAGGGCCAACAGTCGGGACAGGGCCAGGGCGGTGCACCGCTCAGTTTCGTCTACGAGTATTACAAGCTGCCGCACTTGTCCGACTCCGTCAAGGACAAGCATCTTGCCGACATATGGCCAACCACGTCTTCACCGAACGGTTCACTGTTACCGTCGCAGCTTAAACCGTCCAACGGACTCATCGGCACCGGTCCAGGAGGACTGGAGATCGGCGCCGGACACCTGGGCGATTTGCAGGGACTTTTCCTGCACCAGCAACCGCTTAAGCGCGAGCCCGAGGACTTGAGCCATCACCGCGGCGGCGGACCACCGAACAAGGGCGGCAACAATGCGGACGGTCTGAAAACGATCGGTGGACGTCCCAAAGTGGTGTTGGTCGCGCCCGGCAACAACGGCGGTCAGCAGGACCAGCAGCAACAGCAACTAGTCGTGGACGTCGTAAACAACAATAACAATCAGCAGGCGAACAACAACAACAACGCGGTGGGCGGCGTGAAGGAGGAGTACGGCGGTGGACACCATTCGCCGCAGCACAACAGCCGGTCGATAAACGGCACGCCGTCGTCCACGTCGTCGCTCATCACCGAGATGAACCCGCCGCCGCCGGCCATCGAGTTGATCGCCACGCCGGACGGCCTGAAGCCCATGTACGGCACGCACATATTCACCACCATGTCCGGACAGCACGCCGACAGCGGCACGCCGTCGCCCAACTCGTACGAGCACCAGCAGTACACCACGTCGTCCGTGCTGACGGGCAGCGGCGGTGCCGGCAACCCGGGCGGCTACATCACCACGTCCGGCGGCCGGGCCCCGTTCGCGGACCCGTACACTTACCGCGAGTACTTCGGCGGCGCGGGCGCTGGCCCCGAACCGGGCCCGTACGGCTCGCAGATCGGCACCGGCGGCGGTGGCCGGCAGACCGCGTCCTCCTACGGCGGCGATGCCTCCGACCCCGGCGCCGTGTCCAACGCCGCGGCCACAGCGTCGTTTGTCGAACGTTACGTCCGACAAAGCTCGTACCACAACAAGGGCGTCATCGCCGCAGCCGGCCTCACCGTCGACCTGCCGTCGCCCGACAGCGGTATCGGCGCCGACGCCATCACGCCACGTGACCAAAACGCCATCCAACAGTCATTCGATTACAACGAGATGTGCCAAACACCTAGCATGTTGGGTGAACACCAAGCACAGCGGACGCCCACCGGAGGACGGTCGAGACCGTGGCACGACTTCGGCAGACAAAACGATGCGGACAAGATACAAATACCAAAAGTATTCTCCAACTACGGGTTCCGCTATTATTTGGAATCACCGATCTCCACTAACCAAAGGCGTGAAGACGACAGGGTGACGTACATCAATAAAGGCCAGTTTTATGGCATTACTATGGAGTACATACCAGACCCTGATAAACCGTTGACCAGTCAAACAGTCAAGAGCGTGGTCATGCTGATGTTCAGAGAGGAGAAAAGTCCAGATGACGAAATCAAAGCGTGGCAATTTTGGCACGGCAGACAGCACAGCGTCAAACAGCGAATACTCGATGCCGACACGAAAAACAGTGCAGGCCTGGTGGGATGCATTGAAGAAGTATCACACAACGCCATCGCCATTTATTGGAACCCTCTGGAGAGTCCAGCAAAAATCAACGTCGCCGTGCAATGTCTGAGTACGGATTTCAGCAGCCAAAAAGGCGTAAAGGGTTTGCCGCTGCACCTGCAAATCGACACCTACGAAGAACCGAGAGACGGACCTGTGTACCACAGGGGATATTGTCAAATCAAAGTTTTCTGTGATAAGGGAGCCGAAAGGAAGACCAGAGACGAAGAGCGGAGAGCGGCCAAACGGAAAATGACTGCCACGGGTCGCAAGAAGATCGACGAACTCTATCATCCGCCATGCGAGCGATCAGAATTCTATTCGATGAGCGACCTCAACAAACCACCAGTATTGTTCTCACCCGCCGAGGACATCGACAAGCTGACGTCGATGGAACTTCAGGGATTCTATGGACATGACACGGACACGTCTAGTCTATCGAACGGCGAACCTGGTTCGCTGAAGCACTCGTCGCCTTTCCTGTTGCACTCTGGTGTGGCCAACAAGCCAGCTGGTACGACGACTACGCAGACACTCAAGTTCCACAATCACTTCCCGCCGGATACGCATAACGAGAAGAAAGAAGTACTGGACCAGAGCGGACTGACCACGGACGGTACCGTGTTCTCGAGTCCGCCCAACAAGCGAACGAAGCTGCAAGTGCCGCCCATTAACGAGCGAGTAATGCTGTACGTGCGGCAGGACGCTGAGGACGTGTACACGCCTCTGCACGTCATACCGCCAACGACCCAGGGACTATTGAATGCTATTGAGGCTAAGTACAAAATTTCTGCTTCCAGCATTAGTAACATGTATCGAAAAAACAAAAAAGGGATTACGGCCAAAATTGATAATGATATGCTCAAATATTATTGTAATGAAGATTCATTTCTATTGGAAGTCAGACATGCCGAAGAAAATGAGAACATGCTTGATATTATACTGATTGAATTTATGGACCATTAA
- Protein Sequence
- MADSDTNGGGGAGGGGGGGGGGGGGVTEQPAEPGGWRSSYYEHPLTAATSAMLNISGGAAGDEQGQQSGQGQGGAPLSFVYEYYKLPHLSDSVKDKHLADIWPTTSSPNGSLLPSQLKPSNGLIGTGPGGLEIGAGHLGDLQGLFLHQQPLKREPEDLSHHRGGGPPNKGGNNADGLKTIGGRPKVVLVAPGNNGGQQDQQQQQLVVDVVNNNNNQQANNNNNAVGGVKEEYGGGHHSPQHNSRSINGTPSSTSSLITEMNPPPPAIELIATPDGLKPMYGTHIFTTMSGQHADSGTPSPNSYEHQQYTTSSVLTGSGGAGNPGGYITTSGGRAPFADPYTYREYFGGAGAGPEPGPYGSQIGTGGGGRQTASSYGGDASDPGAVSNAAATASFVERYVRQSSYHNKGVIAAAGLTVDLPSPDSGIGADAITPRDQNAIQQSFDYNEMCQTPSMLGEHQAQRTPTGGRSRPWHDFGRQNDADKIQIPKVFSNYGFRYYLESPISTNQRREDDRVTYINKGQFYGITMEYIPDPDKPLTSQTVKSVVMLMFREEKSPDDEIKAWQFWHGRQHSVKQRILDADTKNSAGLVGCIEEVSHNAIAIYWNPLESPAKINVAVQCLSTDFSSQKGVKGLPLHLQIDTYEEPRDGPVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKIDELYHPPCERSEFYSMSDLNKPPVLFSPAEDIDKLTSMELQGFYGHDTDTSSLSNGEPGSLKHSSPFLLHSGVANKPAGTTTTQTLKFHNHFPPDTHNEKKEVLDQSGLTTDGTVFSSPPNKRTKLQVPPINERVMLYVRQDAEDVYTPLHVIPPTTQGLLNAIEAKYKISASSISNMYRKNKKGITAKIDNDMLKYYCNEDSFLLEVRHAEENENMLDIILIEFMDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308602;
- 90% Identity
- iTF_01346849;
- 80% Identity
- -