Basic Information

Insect: Sinelater perroti
Gene Symbol: -
Assembly: GCA_036346155.1
Location: JARFIY010000201.1:1365301-1373360[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.7e-05 0.028 17.1 2.4 1 23 334 356 334 356 0.97

2 18 3e-05 0.0085 18.7 1.8 1 20 362 381 362 384 0.94

3 18 1.7e-05 0.0048 19.5 0.8 1 23 390 412 390 412 0.98

4 18 7.2e-05 0.021 17.5 3.6 1 21 418 438 418 440 0.95

5 18 2.9e-05 0.0084 18.7 4.6 1 23 446 468 446 468 0.99

6 18 2.8e-05 0.008 18.8 5.3 1 23 474 496 474 496 0.97

7 18 4.7e-06 0.0013 21.2 7.2 1 23 502 524 502 524 0.97

8 18 1.1e-07 3.1e-05 26.4 2.7 1 23 530 552 530 552 0.98

9 18 8e-05 0.023 17.4 6.7 1 23 558 580 558 580 0.97

10 18 1.3e-05 0.0037 19.9 5.5 1 23 586 608 586 608 0.97

11 18 3.5e-07 0.0001 24.8 2.9 1 23 614 636 614 636 0.98

12 18 7.3e-06 0.0021 20.7 7.9 1 23 642 664 642 664 0.98

13 18 6e-06 0.0017 20.9 8.9 1 23 670 692 670 692 0.98

14 18 1.9e-05 0.0054 19.4 7.7 1 23 698 720 698 720 0.98

15 18 1.2e-05 0.0035 20.0 7.1 1 23 726 748 726 748 0.97

16 18 6.4e-05 0.018 17.7 0.7 1 23 754 776 754 776 0.98

17 18 0.028 8.2 9.3 5.1 1 23 786 808 786 808 0.98

18 18 7.7e-07 0.00022 23.7 0.9 1 23 814 836 814 836 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.7e-05	0.028	17.1	2.4	1	23	334	356	334	356	0.97
2	18	3e-05	0.0085	18.7	1.8	1	20	362	381	362	384	0.94
3	18	1.7e-05	0.0048	19.5	0.8	1	23	390	412	390	412	0.98
4	18	7.2e-05	0.021	17.5	3.6	1	21	418	438	418	440	0.95
5	18	2.9e-05	0.0084	18.7	4.6	1	23	446	468	446	468	0.99
6	18	2.8e-05	0.008	18.8	5.3	1	23	474	496	474	496	0.97
7	18	4.7e-06	0.0013	21.2	7.2	1	23	502	524	502	524	0.97
8	18	1.1e-07	3.1e-05	26.4	2.7	1	23	530	552	530	552	0.98
9	18	8e-05	0.023	17.4	6.7	1	23	558	580	558	580	0.97
10	18	1.3e-05	0.0037	19.9	5.5	1	23	586	608	586	608	0.97
11	18	3.5e-07	0.0001	24.8	2.9	1	23	614	636	614	636	0.98
12	18	7.3e-06	0.0021	20.7	7.9	1	23	642	664	642	664	0.98
13	18	6e-06	0.0017	20.9	8.9	1	23	670	692	670	692	0.98
14	18	1.9e-05	0.0054	19.4	7.7	1	23	698	720	698	720	0.98
15	18	1.2e-05	0.0035	20.0	7.1	1	23	726	748	726	748	0.97
16	18	6.4e-05	0.018	17.7	0.7	1	23	754	776	754	776	0.98
17	18	0.028	8.2	9.3	5.1	1	23	786	808	786	808	0.98
18	18	7.7e-07	0.00022	23.7	0.9	1	23	814	836	814	836	0.96

Sequence Information

Coding Sequence: ATGTTGGGCCAACACACTGGGCTAATACCGGCCGATCCACTGCTCCTGCAGCAGCACACCCAGATCCCAGTCAGCATATCGACATCACAGGGAATCACAAACCTAGCCATTCCCGCGAGCGCCATGCATTTAGAGAACCACCAGAACCACAATCAGGCCCAAGCCCTGCCGAACCACCACCAGCAGTCGGAGACACAGGCCATTGTGACGCAGGCGCAGGCGCAATTGTCGCATGCGCAGCTCCAGAACTCCCAGCAGAACCACAACCCCCAGCCGCAACAGCAGAATATTGTGCAGGTACAGGTGCAGGATAACTTGGTTTCCGTCATAGAGGACAACAAGGACCACAAGGATCTGATCGCCTCGCAACTGGCGCAGGCGCAAATCCATCTAGGCGAGAACCAGCAGCTGGGGCAGCAGACTTTAACGGTGCAGCAGCTGCAGCATCTGCAGGTGCAACAAGTGCTGGATAATGTGGTGCGCATGGAGGGTACGGTAGAGAATGGCCAGAACCAGCCAGGCGCCGAGCAGAACCCTCTAGCAGGTGACGACAGTATGCAAATCGTGAAGGACGAAAAGAGCCTGCAGAATTGTACAAAACTGCTTACCGGAACGCAGTTTGGCCTGCAAGATATAAAAGGGAATTTGATGGACGTGCGAACAGCTGATGGTAGTATAGTCAAAATTTCAGCCGGCATCCAAGACCAGGATCTAGCAAAAACTTTAGGGGTTGAAATGGTGCAGAACATGTATAAAGTGAATGTTGACGACATTAACCAGTTACTTGCATATCACGAAGTTTTTGGGAAGCTGCAGGGCGAAATTTCGACAGGACCCAACATTGCGACAAATAACGCCAATGTTAACTTGCAGACAGCAAACGCTGTTACAGGGAATATTCAAATTGTTGCGCCTAAGTCTATTACTGAAAGCGAGCAACAAGAGCCTTCGACTAGTTCGATTGCTGCAGATAGCCCTCCGGCGATCATCACCGGTAACCATGTGTGTGACTTATGCGGTAAGATGTTTCAGTTTCGTTATCAGCTCATAGTGCACAGACGATATCATACGGAAAGGAAGCCTTTTACTTGCCAGGTGTGCGGGAAGGCTTTTACTAATGCACAGGAGCTTACGCGACATGGGAAGTGCCATCTCGGGGGTAGCATGTTTACGTGTGCAGTGTGTTTTCATGTGTTCGCCAATGCTGCTTCCTTGGAGCGCCATATGAAGCGCCATTCTACAGATAAACCTTACAACTGCACCATCTGCGGGAAAGCCTTTGCCAGGAAGGAGCATTTGGACAACCATACGCGTTGTCATACAGGGGAGACGCCCTACAGGTGTCAGTACTGTGCAAAGACTTTCACAAGAAAAGAACATATGGTTAACCATGTTCGGAAGCACACAGGTGAAACACCTCACAGGTGTGAAATCTGCAAGAAGTCATTCACCAGGAAAGAGCACTTTATGAACCACGTCATGTGGCACACCGGTGAAACCCCTCACCATTGCACGATTTGTGGCAAGAAGTACACCAGGAAGGAACATCTGGCGAATCACATGCGATCGCACACCAACGACACGCCGTTCAGGTGCGAAATCTGTGGAAAGTCATTTACTAGGAAAGAACATTTCACAAATCACATCATGTGGCACACCGGTGAGACCCCACACCGGTGTGACTTCTGCTCAAAGACCTTCACCAGGAAGGAGCATCTGCTAAATCATGTTCGGCAGCACACCGGCGAATCCCCACACAGGTGTGCCTATTGCTCAAAATCTTTCACACGTAAGGAGCACCTCATCAACCACGTGAGACAGCATACAGGAGAGACGCCGTTCCGCTGCAACTACTGCCCCAAGGCGTTCACGCGAAAGGACCACCTGGTGAACCACGTCAGGCAGCACACAGGAGAGTCGCCACACAAGTGCACATACTGCACCAAGTCCTTCACTAGGAAGGAGCACCTCACAAACCACGTCCGGCAGCACACTGGCGAGTCGCCTCACCGCTGCCACTACTGCTCCAAGTCTTTTACGAGAAAAGAGCACCTTACAAACCATGTGCGCATTCACACAGGCGAATCTCCGCACCGCTGTGAATTCTGCCAGAAAACCTTCACCCGGAAGGAGCATCTCACCAACCATTTGCGTCAGCATACGGGGGAGACGCCGCACTGCTGCAACGTTTGCTCCAAGCCATTTACAAGGAAGGAACATCTTATAAATCACATGCGATCTCATACAGGCGAGAGGCCATTTTCGTGTAGTGAGTGTGGGAAATCATTTCCACTTAAAGGAAATCTGCTCTTCCATCAACGGTCCCACAACAAAGGTGCCGAAGCCGACCGCCCTTTCCGGTGTGATCTCTGTGACAAAGACTTTATGTGCAAGGGCCACTTGGTTTCACACAGGAGGTCACATAGTGGGGAGAGGCCTCATGCATGCCCTGACTGTGGCAAAACGTTTGTCGAGAAGGGCAATATGCTACGGCACTTGCGCAAGCATGCCATTGAGAACGGGCAGCCGCAGCCGGCCGAGAATCAAGTGGCACAGGTCGTTACTAACCAGGTGGTGGGCAGCCAGGCGGCACAGCCGCAGCCCAGCACGACCCCCGTGCAACCGCCAGCGACTGCCACAATCCAGATGCCTCAGGCCAGCCAGAGCCAAACCCTCACCAACTCTGTATCTTCCGGAAGCATAGTTACCACAGGTAATATCGTTCATCAAACGCATCTGCCCATCCACCAGCCATCCACCCACCCCGTCGTCGTTCCTACTGCAAATACCAATATCTTAGCGTCGTATTCATAA
Protein Sequence: MLGQHTGLIPADPLLLQQHTQIPVSISTSQGITNLAIPASAMHLENHQNHNQAQALPNHHQQSETQAIVTQAQAQLSHAQLQNSQQNHNPQPQQQNIVQVQVQDNLVSVIEDNKDHKDLIASQLAQAQIHLGENQQLGQQTLTVQQLQHLQVQQVLDNVVRMEGTVENGQNQPGAEQNPLAGDDSMQIVKDEKSLQNCTKLLTGTQFGLQDIKGNLMDVRTADGSIVKISAGIQDQDLAKTLGVEMVQNMYKVNVDDINQLLAYHEVFGKLQGEISTGPNIATNNANVNLQTANAVTGNIQIVAPKSITESEQQEPSTSSIAADSPPAIITGNHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCTICGKAFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRKEHLINHVRQHTGETPFRCNYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHYCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFSCSECGKSFPLKGNLLFHQRSHNKGAEADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRKHAIENGQPQPAENQVAQVVTNQVVGSQAAQPQPSTTPVQPPATATIQMPQASQSQTLTNSVSSGSIVTTGNIVHQTHLPIHQPSTHPVVVPTANTNILASYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00422871;
90% Identity: iTF_00399729;
80% Identity: -