Basic Information

Insect: Ctenicera cuprea
Gene Symbol: -
Assembly: GCA_958336395.1
Location: OY284489.1:34766228-34789437[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00018 0.02 17.0 2.4 1 23 421 443 421 443 0.97

2 18 5.4e-05 0.006 18.6 1.8 1 20 449 468 449 471 0.94

3 18 3.1e-05 0.0034 19.4 0.8 1 23 477 499 477 499 0.98

4 18 0.00013 0.015 17.4 3.6 1 21 505 525 505 527 0.95

5 18 5.3e-05 0.0059 18.6 4.6 1 23 533 555 533 555 0.99

6 18 5.1e-05 0.0057 18.7 5.3 1 23 561 583 561 583 0.97

7 18 8.6e-06 0.00096 21.1 7.2 1 23 589 611 589 611 0.97

8 18 2e-07 2.2e-05 26.3 2.7 1 23 617 639 617 639 0.98

9 18 0.00015 0.016 17.2 6.7 1 23 645 667 645 667 0.97

10 18 2.4e-05 0.0026 19.7 5.5 1 23 673 695 673 695 0.97

11 18 6.4e-07 7.2e-05 24.6 2.9 1 23 701 723 701 723 0.98

12 18 1.3e-05 0.0015 20.5 7.9 1 23 729 751 729 751 0.98

13 18 1.1e-05 0.0012 20.8 8.9 1 23 757 779 757 779 0.98

14 18 3.4e-05 0.0038 19.2 7.7 1 23 785 807 785 807 0.98

15 18 2.2e-05 0.0025 19.8 7.1 1 23 813 835 813 835 0.97

16 18 0.00012 0.013 17.5 0.7 1 23 841 863 841 863 0.98

17 18 0.052 5.8 9.2 5.1 1 23 873 895 873 895 0.98

18 18 1.4e-06 0.00016 23.6 0.9 1 23 901 923 901 923 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00018	0.02	17.0	2.4	1	23	421	443	421	443	0.97
2	18	5.4e-05	0.006	18.6	1.8	1	20	449	468	449	471	0.94
3	18	3.1e-05	0.0034	19.4	0.8	1	23	477	499	477	499	0.98
4	18	0.00013	0.015	17.4	3.6	1	21	505	525	505	527	0.95
5	18	5.3e-05	0.0059	18.6	4.6	1	23	533	555	533	555	0.99
6	18	5.1e-05	0.0057	18.7	5.3	1	23	561	583	561	583	0.97
7	18	8.6e-06	0.00096	21.1	7.2	1	23	589	611	589	611	0.97
8	18	2e-07	2.2e-05	26.3	2.7	1	23	617	639	617	639	0.98
9	18	0.00015	0.016	17.2	6.7	1	23	645	667	645	667	0.97
10	18	2.4e-05	0.0026	19.7	5.5	1	23	673	695	673	695	0.97
11	18	6.4e-07	7.2e-05	24.6	2.9	1	23	701	723	701	723	0.98
12	18	1.3e-05	0.0015	20.5	7.9	1	23	729	751	729	751	0.98
13	18	1.1e-05	0.0012	20.8	8.9	1	23	757	779	757	779	0.98
14	18	3.4e-05	0.0038	19.2	7.7	1	23	785	807	785	807	0.98
15	18	2.2e-05	0.0025	19.8	7.1	1	23	813	835	813	835	0.97
16	18	0.00012	0.013	17.5	0.7	1	23	841	863	841	863	0.98
17	18	0.052	5.8	9.2	5.1	1	23	873	895	873	895	0.98
18	18	1.4e-06	0.00016	23.6	0.9	1	23	901	923	901	923	0.96

Sequence Information

Coding Sequence: ATGAATTCTAATGAACAAAACCATCTCAATGGAGCACAGCCCCAAACAGAAAATACAGAAGTTGCTACACAAAGGCCACCACCAGCAACTTCTGTACCAACTGATTTGCGTGTCAACACAACAGCATTAAATGCAGTGGCATTAAGCAGCGTGGCTAAATATTGGGTGCTTACGAATTTACTCCCAGGACCAATACCACAGGTGTCAGTGTATGGCTTACCTAGTTCTGCTCGTACAGACAACCAAGGCAAAATGACACAGGAAACTATGTTAAGCCAGCATGCTGGAATTCTCCCCGCAGATCCTTTGCTTTTACAACAACATACTCAAATACCAGTTAGCATATCCACATCACAAGGTATTACAAATTTGGCCATTCCTGCTAGCGCTATGCACTTAGAAAATCCACAGAATCATTCTCAGACATTGTCTACCCATCATCAACAATCTGAGGGACAAACTATTGTTACTCAAGCCCAAGCACAGTTATCTCATGCTCACTTGCAAAATTCTCAGCAAAATCACGCTCAACAATCACAACAAAGTATCGTTCAAGTGCAGGTACATGATAATTTAGTATCTGTAATCGAAGATAGTAAAGACCATAAGGACTTAATTGCTTCTCAGTTAGCACAAGCTCAAATTCATTTAAGTGAAAGTCAACAGTTGAGCCAGCAGACATTAACAGTGCAACAACTTCAACATTTGCAAGTTCAACAAGTATTAGACAATGTAGTTCGTATGGAAAATGCTGTAGAAAATGGACAAAATCAGGCAGGTACTGAGCAGGATCCTTTAGCTGGTACAGATGGTATGCAGATTGTAAAAGAtgagaaaaatttgcaaaactgtaCAAAACTACTTATGGGAACACAGTTTGGTTTGCAAGACCTCAAAGCAAACTTGATGGATGTTCGGACTGCTGATGGAAGCATAGTAAAGATTTCAGCTGGTATTCAGGACCAAGATTTAGCAAAAACTTTAGGTGTTGAAATGGTGCAAAATATGTGTAAAGTGAATGTAGATGATCTTAACCAGTTGCTTGCATATCATGAAGTTTTTGGAAAGTTGCAGGGGGAAATTTCAACAGGACCAAATAATGTTACAACAAATAATTCCAATGTTAATCTTCAACAAACTGCAAATGCTATTGCTAGCAACATTCAAATTGTTACTCCTAAAACTCTAAATGAGAATGAACAGGAAGCTTCTACAAGTTCAATTGCAGCAGACAGCCCACCAGCAATTATTACTGGAAATCATGTGTGTGACTTGTGCGGTAAAATGTTTCAGTTTCGTTATCAATTAATTGTGCACAGACGCTACCACACAGAGAGGAAACCATTCACTTGCCAGGTTTGTGGAAAAGCATTTACTAATGCACAAGAACTCACTCGACATGGCAAATGCCATCTTGGTGGCAGTATGTTTACTTGTGCGGTGTGTTTTCATGTGTTTGCTAATGCCGCTTCTCTGGAACGTCATATGAAGCGGCATTCCACAGACAAACCATATAATTGTACTATATGTGGGAAGGCGTTTGCTAGGAAAGAACATCTGGACAATCACACCAGATGCCACACTGGCGAAACTCCATATAGGTGTCAGTATTGTGCGAAAACTTTCACAAGGAAGGAGCATATGGTTAATCACGTTCGAAAGCATACAGGTGAGACACCTCATAGGTGTGAAATATGTAAGAAGTCATTCACAAGGAAAGAACATTTTATGAACCATGTAATGTGGCATACGGGAGAAACACCTCATCATTGCACAATTTGTGGAAAAAAATACACAAGAAAGGAACACTTAGCTAACCATATGCGATCACACACCAATGACACACCATTTAGATGTGAAATTTGTGGGAAATCTTTTACCAGGAAAGAACATTTTACAAATCACATTATGTGGCACACTGGTGAGACACCACATAGATGtgacttttgttcaaaaacatttacCAGAAAGGAACATCTACTTAATCACGTAAGACAACATACAGGAGAATCCCCTCACAGATGTGCATACTGCTCAAAATCTTTTACTCGTAAAGAACATCTTATTAATCATGTAAGGCAGCACACTGGAGAAACACCTTTCCGTTGTAATTATTGCCCAAAAGCTTTTACCAGAAAGGATCATTTAGTTAATCATGTTCGACAACACACTGGCGAATCTCCACATAAGTGTACATATTGCACCAAGTCGTTTACTAGGAAAGAACATTTAACAAATCATGTTCGACAGCACACTGGTGAGTCACCTCATCGTTGCCATTATTGCTCCAAGTCATTTACAAGGAAGGAGCATCTAACTAACCATGTTCGTATACATACGGGTGAATCTCCACACCGATGTGAATTTTGTCAAAAGACATTCACAAGAAAGGAACATCTTACAAATCATTTGCGTCAACATACAGGAGAAACACCACATTGTTGCAATGTTTGTTCTAAACCATTTACAAGGAAGGAACATTTGATAAACCACATGCGTTCACATACAGGAGAGAGGCCATTTTCCTGTAGTGAATGTGGAAAGTCCTTTCCTCTTAAAGGTAACTTGCTTTTCCATCAACGGTCTCACAATAAAGGTGCTGAAGCTGATAGGCCATTCAGATGTGACCTTTGTGACAAAGATTTTATGTGTAAAGGTCATTTAGTGTCACACAGAAGATCTCACAGTGGAGAAAGACCACACGCTTGTCCAGACTGTGGTAAAACTTTTGTGGAAAAAGGTAACATGTTGCGACATTTACGAAAACACGCTGTTGAAAATGGACAGCCACAACCTACTGGAAATCAAGTGTCACAAGTTGTAACCAATCAGGTCGTCAGTAACCAAGTGGCTCAGCCTCAACCAAGTACAACACCGGTACAAACATCTGTAGCTGCCACGATTCAGATACCACAGGTAAGTCAGAGTCAAACTTTATCCAGCTCTGTTTCTGCGGGAAATATAGTCACTACAGGTAACATCGTTCAGCAGACACACTTACCCATTCACCAGCCATCCAACCATCCAGTTGTTGTTCCTACAgctaatacaaatattttagcctcatattcataa
Protein Sequence: MNSNEQNHLNGAQPQTENTEVATQRPPPATSVPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPSSARTDNQGKMTQETMLSQHAGILPADPLLLQQHTQIPVSISTSQGITNLAIPASAMHLENPQNHSQTLSTHHQQSEGQTIVTQAQAQLSHAHLQNSQQNHAQQSQQSIVQVQVHDNLVSVIEDSKDHKDLIASQLAQAQIHLSESQQLSQQTLTVQQLQHLQVQQVLDNVVRMENAVENGQNQAGTEQDPLAGTDGMQIVKDEKNLQNCTKLLMGTQFGLQDLKANLMDVRTADGSIVKISAGIQDQDLAKTLGVEMVQNMCKVNVDDLNQLLAYHEVFGKLQGEISTGPNNVTTNNSNVNLQQTANAIASNIQIVTPKTLNENEQEASTSSIAADSPPAIITGNHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCTICGKAFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRKEHLINHVRQHTGETPFRCNYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHYCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFSCSECGKSFPLKGNLLFHQRSHNKGAEADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRKHAVENGQPQPTGNQVSQVVTNQVVSNQVAQPQPSTTPVQTSVAATIQIPQVSQSQTLSSSVSAGNIVTTGNIVQQTHLPIHQPSNHPVVVPTANTNILASYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00422871;
90% Identity: iTF_00789527; iTF_01345855;
80% Identity: -