Sper028340.1
Basic Information
- Insect
- Sinelater perroti
- Gene Symbol
- Hr39
- Assembly
- GCA_036346155.1
- Location
- JARFIY010000110.1:13821138-13830207[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2 5.4e+04 -4.5 8.2 62 176 150 265 114 296 0.45 2 4 3.2e-09 0.00015 23.7 0.1 1 61 371 431 371 444 0.66 3 4 0.062 2.8e+03 -0.3 0.0 87 113 429 459 397 484 0.69 4 4 5.8e-73 2.7e-68 233.6 0.1 202 408 499 700 425 700 0.88
Sequence Information
- Coding Sequence
- ATGGCCGCAGATATGAGGTCTCCCAACGTGTCCGTTACCCCCATCAACGTAGAGCCTTATCCTCCAGCATCGCTTTCCAATGGGGTTCTGCCCAACCACACTCACATCACCACCGACGCCCAGCTCAATGGGCCGCCTGCCACTCCTCTCACCCTCACCAATGGTGATACGTTGGACAGTTCTGATGCCGAAGTGGCCCAAATCGACTTTCATTCGACCACGGTCAACCTGCGCCAGAAGAAGAAACACGACGAGAATGATATTCCCAGGCCGATGTCGTGGGAGGGCGAGCTTTCGGATGGAGAGAGGGATATGTGCATCGATGAGGACGGGGGATCTCAGCTTCCTGAAAATCTTTCATTATCTCAGTCAAAGCAGAATGTTGCGCTGTCTGAGCTAAAGGAGAGTCCTATTATGAGGTTGAAGCAGCCTGCAGTGAGCAATTATTCGCTGCACAGCACCCCAAGCAATTCTCCTCTTCTCAGCCAGAGGCATCCGGGCAGTGTGCCTCTCCTTACCCACAAGGACCTTATGCATAAATCTCTGAACGTGCCCCCAACGCCTAGCCCCGACTCGGCCATACATTCAGCATACAGTGTGTTTAGTTCGCCGAGCCAAAGCCCTTTAACGCAAAGACATTTGACTCCGAATTTGAGTCGGAACAATAGTGATGCTTCTCATTCTAGCTGTTGTAGTTATTCCAGTGTTTCCGTATCGGTTTCGCCTACGCAGCAGTTTTCTCCTACTCATAGTCCTATACAGGGTCGTCATATGCCTGGACTCCACCTCCAGTATACACCTGAGCATGACGGCCTAGAAGAGGCTGAAGATAAGACTGGTCTAGTACACACTTCTCTCCCTGCACAACCCGGTATCTCTCGACAGCAGCTAATTAACAGTCCATGTCCAATTTGTGGTGATAAAATATCCGGTTTCCACTATGGAATATTTAGTTGCGAATCCTGCAAGGGCTTTTTTAAGCGCACAGTACAAAACCGAAAGAACTATGTGTGTTTACGTGGCGCCTCTTGCCCTGTCACCgtagcaacaaggaaaaagtgTCCCGCATGCCGTTTCGATAAGTGCCTGCAGTGTGGCATGAAGCTGGAAGCTATAAGGGAAGACAGAACAAGAGGGGGTCGTTCGACATATCAGTGCTCTTATTCACTGCCGCCAGCGTTGGCCAGCCACCCAGAACTCAGAACAAGTGCCACAGATCTTCGGCAGGGCTATGGCGACCCACCCCAGCAGGTGCTGCGGGTAAAGTTGGAGCCTACAGAGTCTAGTTCATTCATGAAGAGGTCAACGCCTACTAATTCTCGGTTGGGTGTCCCGCCATTATTGCAGGAAATAATGGACGTGGAGCATCTGTGGCACTGCAGTGAATTGGAGCTAAACAAGTTAAGTGATGGTACTTTAAGTAAGGCAGGTTCCAGCGGTGCTGTGCACAGCTTATCTTCCCATCCCTTACTTGCCAGTACCGCGCTTGCAGGTTCCACCGACACCAATCCGGACTTCGTAGCGAATTTGTGCAATATTGCCGATCATCGGTTGTATAAGATTGTTAAATGGTGCAAGAGTTTGCCTCTATTCAAGAATATTTCGATCGATGATCAAATTAGCCTGCTCATAAACTCCTGGTGCGAGCTGTtgttgttttcttgttgtttccGGTCTATGTCGACACCAGGCGAAATTAGGATATCCTTGGGCAAAAGCATCAGTTTGGAGCAAGCGAAGGAGATGGGTCTGGGCGCTTGCATCGAGCGCATGCTCAATTTCACTGATCATTTGCGAAGACTAAGGGTTGATAAGTATGAATATGTTGCCATGAAAGTTATAGTGCTACTTACATCAGATACTTCAGAACTGCGAGAAGCAGAAAAGGTTCGTGCCTCACAAGAGAAGGCTCTCCAGGCCTTACAACATTACACGTTGGCTCACTATCCAGATTCTCCAGCCAAGTTTGGGGAGCTTCTGTTGAGAATACCTGAACTACAACGAACTTGTCAGGTGGGCAAAGAGATGTTGACGATCAAGTCGAAAGATGGCGAAGGGCCAAGTTTCAACCTGCTCCTGGAGCTGCTTCGAGGGGACCACTAG
- Protein Sequence
- MAADMRSPNVSVTPINVEPYPPASLSNGVLPNHTHITTDAQLNGPPATPLTLTNGDTLDSSDAEVAQIDFHSTTVNLRQKKKHDENDIPRPMSWEGELSDGERDMCIDEDGGSQLPENLSLSQSKQNVALSELKESPIMRLKQPAVSNYSLHSTPSNSPLLSQRHPGSVPLLTHKDLMHKSLNVPPTPSPDSAIHSAYSVFSSPSQSPLTQRHLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMPGLHLQYTPEHDGLEEAEDKTGLVHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPALASHPELRTSATDLRQGYGDPPQQVLRVKLEPTESSSFMKRSTPTNSRLGVPPLLQEIMDVEHLWHCSELELNKLSDGTLSKAGSSGAVHSLSSHPLLASTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQISLLINSWCELLLFSCCFRSMSTPGEIRISLGKSISLEQAKEMGLGACIERMLNFTDHLRRLRVDKYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQHYTLAHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLLELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951009;
- 90% Identity
- iTF_00838593;
- 80% Identity
- iTF_01345738;