Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_036346155.1
Location
JARFIY010000298.1:11951094-11999288[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-14 4.1e-10 41.7 0.2 79 116 66 102 55 102 0.94
2 3 0.18 5.4e+03 -0.6 0.0 27 64 230 267 214 272 0.81
3 3 0.86 2.6e+04 -2.8 2.2 13 87 1255 1335 1249 1345 0.58

Sequence Information

Coding Sequence
ATGACACTGTTATTTAATCAATCGTGGGACGGAGCCGGGCCGCATGAATTTAAACTGCCTTATTACCGAACTCCATACGCCATATTAGATTCTATTGTTAGGAAGGAACGCGGACTAATAATTCCTTTTTATGTCGGCGCGGCTCGCTGGCGGCTGAAATTCGACCGAAAATGCCTGATACACGACGTTCCCTTGCAGTGCATCTACGGCTGCTACGTCCACTCCGCCATACTGCCGACCTTCCACAGAAGATGCTATTGGCTTCTTCAGAACCCCGACATCGTGCTGGTGCACTACCTCAACGTACCCTACCCGGATGACAACAAGCTCGCCGTCATCACTCCCAGCCTGTCGCTGTGGGCGGACAAGAAGGAATGGACGAAGGAGGAGCTGATTTCGCAGCTTAAGCCGATGTTCTTCAGCGAAGACGAGCCAGATCTCAACAACGAATTAGAGATATCGACTGCCGAAACGGTGGAAGCAATAGTAAGTCAATTAATGGAAAAACAGCGCGTCGCCCGTCAAGCGGCCCTGGTCAAGCAATTAGAGTGCGGCTGTCCAGATTCTACGTGCGCTGACGGCAAGTCGTGCTCCCATCCGATGCGGCGAATAAGCGCCGCCAAAAACGAGATGACCAACTCGCTGCCCTCGTCCAGCTCGAACTCGAGGCCCCCGAGCAGGGCCGATAACAACCAGGTCTCGTCGACTACAGGCTCCGGGGGAATGTTCCTATCCAACAACCATTCCGGCAGGGTTTACTCCCGCGACGCGCGGAACCACCACGGGCAGGCCAGCGGCCAGAATTCGTCCAACTCTGGCAGCACGCCGCCCTTGGTCCTCAGCCTTTCGCAGATTCAGGGGGGAGGTGGGCTGCTGATCCTCAACAGCAACTCGACGGCGTCGCCCAACCCGACCACTCATCAATCGTTTGTCGCCCCAGTTTCTGTCGCTAATTTCGTCTCGAGCACCACCGCCAACAGGGGTCAATCTAAATCCGAGAGGTCGGCTAAAAACGGATCCGCCGTCTTGAAGCAGGAGGTGATGGACACAAATCAATCTACGCCGTACAATCAGGCGTCGGGGCAAAACGTGAATGGAACTAGCGGAAGGATGATAAGTCAGAGGGAGCCGAAGGTTGAGATATCTGCCGATAACATGCGGCAGTCGATGATGAACAGCATGACATACGCCCAGCAGAACAAAAACGTCCACCAGAATCACCAGCAGAACGAAATGTTGATGGTGAGCGCTCCCTCAACTCCTTCCAAACGAATGGACACGAGCAACGAAGACATGACAGActacaaacatcaaaatttctGTGGTGATACAGTAGTTCTTCTGGATACCGACTCTAGTGGATCCTTAGTTAGCAAAAATGTTGGGTCTTCCATTGTAAGCGGCAGTTTCTTCAATGAAACTTTAGATTTATCCCaagaagacatacaaaaaaCCCTGTCCGCCAACATGCCACTGTGTTCAACCGAACTTGAGACACACCAGAGTCACAATTCGGATACGACGAATGGGAACAGGATAATCTCCAGCAAACAGGAATCGGTGCAGCAGCAAACCAACGTTATCTCGCACGACATGAATCCGATGGATTTTATCGACAGTTGTGATGTAGTCGTCTCGCCCACCCACGTAGTTGACGATGACGTTTTTGTAAACTTAGATGCTTTTGATATGCTCGGGGAGTTCCCCGATTTAGAGGGTTTAGATTCTGGGCACACTGGCCTTTTAGATGTTAATCCGTCCGAGAACGAACACGCGGGAAAAGCTCACAACAACATGATGCAGTCGCAAAGCATGCAGATGGATGGGGCCGCCAAAATCACCGATTACTCTCCGGAGTGGGCTTATCCGGAAGGCGGAGTCAAGGTTTTGGTTACGGGGCCCTGGCACTCGTCTGGTCCGTACACCGCTCTTTTTGATACATTCCCTGTTCCAACTACACTTGTACAAGACGGAGTATTGCGTTGTTATTGTCCAGCTCACGAAGCGGGCCTTGCAACATTGCAAGTGGCTTGCAATGGCTGCATTATATCTAATTCTGTGATATTTGAATACAAGCTACCCCCGCGCGAAGAGCAAGTTCCTGCTCCAGAGCCTAAGGTAGAGCGTTCGAATGACAATTTGCTGAAGTTCACGTTGCTGCAGAGACTCGAAGCTATGGACGACAGGcttcaaattaaacaagaaccgTCGGATGACTCatACACCACTCTCTTCACCCAGTCAAACTTCGAGGACCGCCTCGTGTCCTACTGCCAGACTATGACATCGCGGGTGTGGAAGTTCGGCGAGGAGTTGAGCGTATCCTGGTTTGCGTGCCACAAAGGCATGACTTTGCTGCACCTTGCCGCTTCTCTGGGCTATTCTCGCCTGGTGTGCGCCCTGCTGCACTGGAGGGCCGAGAACTCGTCGTTGCTGCTCGAGACGGAAGTCGACGCTCTGAGCCAGGATGAGGACGGATTCACGCCTTTGATGTGGGCGTGCGTAAAAGGGCACACAGAGACGGCAGTAATGTTATACAAATGGAATCACACTGcgctaaacataaaaaacaacaatcttCAAACCGCTTTGGAATGCGCAAGAGCCAATAGCAATATGGATTTAGTTAAAGAATTAGAGAAGTTAGAGGCACGGCGAGATAAAGCTAACATGCTGCTTCATTCTGTAAACGCTTACAACGACAGCGTGAGTTTGTCGCCGTCAGCCATTTCTCCTGCCAGCTCCATTACATCCTTGGCGTCTGTAGCATCAACTAGCCGATCACATGACGGAGTATTTCTTAGACCAGGAGTAGTAACCAGAAGTGAATCACAAAAGTACAAAATGCTGAATACAGACATGGATTCAGCCAGTCCGACGGACCCCCACAGCATCATGAATTCTTCCATTAAAACGACTATTTTACTTCCAAACCCTCTGCTGTCGGAGGCCAACATACAAAATCGCATGGGCAACGCCGGGCACCGCTTAATCAAACGACCCTCTGTCGACAGTGGCATCAACATGACTGCTGGCCAGTCTACTGACAGCTTGCCCTCTCTGAAGTTCAGGAGCATGAAAACCTCATGTGGAAACAATCCAAAGTTGTCAAGATTTGACAGGAGTATGTCACTTCCATTAAGTTCTCCCTTATCAAATCAGGACAGCTCCTTCGATAGTGAGGCCTCTGATAGCTCTCATACGCGGAAGATGGATTTTGCTCTGTGCGAGGTGGGCAGTGGGCCCCGCAGCAATAGCCCCCTGATTGACGTGGAAGCCGTGTCTGATGACGAATCGGACACCCACAACAGTGCCGTAGGGGAGCAAGACGCGCGGGTCTTGACGCTAGCCGAGCAAATCATAGCAGCCATGCCAGATCGCATCAAAAATAAGAGCGAGGAGATGATGCTGGACCACAGCCCGGACCCTCCCGAGACCTTGCCCTCTAGTGACGCTCTCTCAGATGTCTTCATGGAGCCCTTACTGGACCAGTCGACTTCCAGCTTTGAACCTGCCGAGTTCAACTTCGAGTTTTCAGATCATAACTACAGGTACTATGACGTCAGCACACCCTGTTCAAGCCTCAGCCCCGCATCTTCAAGCTGCTTGCAGTCCCCTTGCTCTTTCACCCTGGACTCCCCGTCTCCCCCACCGACAACTGCAGACTTCTGCGAGTTTTTCCAAGCATCGGGAAGCCTTTTTGAGAAGGATTTCTCCAATTTAACCCTATCAGACCAAGAGCAGCGAGAACTGTACGAGGCCGCCAAGATCATCCAGAAGGCGTACCGCTCCTACAAGGGCCGCCAGCAGCAGGAGCAGGACAAAGAGAGGGCGGCGGCTATCATCATCCAAAACTACTACAGGCGCTACAAGCAGTACGCCTACTTCAAGCAGATGACGCACGCGGCCATGGTGATACAGAACGGCTTCCGATCCTACTGCGAGCACAAGCGTTTCAAGAAGAGCCAGGAGGGCTCCGTTAGCATCCAAAACTACTACCGCAACTACAAGGAGCAGAGCGGGAAGGGAAGCCGCGAGGGCACCCCCGCTTCTGGTCTGAAGCGAACGTACTCGCAGAGGCGTCAGCACCAGGCAGCGAGGAAGATTCAGCAGTTTATGCGGCAGTCTAAGAACAAGTGA
Protein Sequence
MTLLFNQSWDGAGPHEFKLPYYRTPYAILDSIVRKERGLIIPFYVGAARWRLKFDRKCLIHDVPLQCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLSLWADKKEWTKEELISQLKPMFFSEDEPDLNNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRISAAKNEMTNSLPSSSSNSRPPSRADNNQVSSTTGSGGMFLSNNHSGRVYSRDARNHHGQASGQNSSNSGSTPPLVLSLSQIQGGGGLLILNSNSTASPNPTTHQSFVAPVSVANFVSSTTANRGQSKSERSAKNGSAVLKQEVMDTNQSTPYNQASGQNVNGTSGRMISQREPKVEISADNMRQSMMNSMTYAQQNKNVHQNHQQNEMLMVSAPSTPSKRMDTSNEDMTDYKHQNFCGDTVVLLDTDSSGSLVSKNVGSSIVSGSFFNETLDLSQEDIQKTLSANMPLCSTELETHQSHNSDTTNGNRIISSKQESVQQQTNVISHDMNPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLEGLDSGHTGLLDVNPSENEHAGKAHNNMMQSQSMQMDGAAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTALFDTFPVPTTLVQDGVLRCYCPAHEAGLATLQVACNGCIISNSVIFEYKLPPREEQVPAPEPKVERSNDNLLKFTLLQRLEAMDDRLQIKQEPSDDSYTTLFTQSNFEDRLVSYCQTMTSRVWKFGEELSVSWFACHKGMTLLHLAASLGYSRLVCALLHWRAENSSLLLETEVDALSQDEDGFTPLMWACVKGHTETAVMLYKWNHTALNIKNNNLQTALECARANSNMDLVKELEKLEARRDKANMLLHSVNAYNDSVSLSPSAISPASSITSLASVASTSRSHDGVFLRPGVVTRSESQKYKMLNTDMDSASPTDPHSIMNSSIKTTILLPNPLLSEANIQNRMGNAGHRLIKRPSVDSGINMTAGQSTDSLPSLKFRSMKTSCGNNPKLSRFDRSMSLPLSSPLSNQDSSFDSEASDSSHTRKMDFALCEVGSGPRSNSPLIDVEAVSDDESDTHNSAVGEQDARVLTLAEQIIAAMPDRIKNKSEEMMLDHSPDPPETLPSSDALSDVFMEPLLDQSTSSFEPAEFNFEFSDHNYRYYDVSTPCSSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFFQASGSLFEKDFSNLTLSDQEQRELYEAAKIIQKAYRSYKGRQQQEQDKERAAAIIIQNYYRRYKQYAYFKQMTHAAMVIQNGFRSYCEHKRFKKSQEGSVSIQNYYRNYKEQSGKGSREGTPASGLKRTYSQRRQHQAARKIQQFMRQSKNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00788892;
90% Identity
iTF_00788892;
80% Identity
-