Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_963082805.1
Location
OY720166.1:22227606-22242219[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.9e-35 7.8e-31 107.3 1.5 40 116 2 76 1 76 0.97
2 3 0.0019 75 4.2 0.0 18 65 195 242 179 247 0.74
3 3 0.19 7.6e+03 -2.2 2.8 13 88 1233 1314 1226 1363 0.70

Sequence Information

Coding Sequence
ATGCTTCTCTACAGCCGGAAGAAAGTCAGATACCGCAGGGATGGCTACTGTTGGAAGAAAAGGAAAGATGGAAAAACCACCAGGGAAGATCACATGAAATTAAAAGTGCAAGGAACTGAGTGTATCTACGGCTGCTACGTTCATTCCGCTATATTGCCGACCTTTCACAGAAGATGCTATTGGCTTCTCCAGAACCCCGATATAGTGTTGGTGCATTACCTGAATGTACCTTACCCGGATGACAACAAACTCGCTGTTATAACTCCAAGCTTGTCATTATGGGCCGACAAAAAGGAATGGACGAAAGAGGAACTGATATCGCAACTTAAACCAATGTTTTTTAGTGAAGATGAACCAGATCTCAACAACGAATTAGAAATATCGACTGCCGAAACGGTGGAAGCAATAGTGAGTCAATTAATGGAAAAGCAACGTGTTGCACGTCAAGCGGCTCTGGTTAAACAATTAGAATGCGGTTGTCCAGATTCTACGTGTGCGGACGGAAAATCGTGTTCCCATCCGATGCGTCGAATAACCGCCGCTAAGAACGAAATAGCAAATACTCTTCCCTCGTCTAGTTCAAATTCTAGACCTCCTAGTAGAGCAGATAACAATCAGGTTTCTTCAACGACGGGCTCGGGAGGAATGTTTTTAACCAATAACCATTCCGGTAGAGTTTATTCGCGAGATGGCAGGAATCACCATGGACAATCCAGTGGGCAAAATTCGTCCAATTCTGGAAATACGCCGCCCTTAGTACTTAGTCTTTCGCAAATACAAGGAGGAGGTGGACTGCTGATTCTCAACAGCAATTCAACAACCTCAACTAGCTCGACCACGCATCAATCATTCGTCGCTCCAGTTTCTGTTGCTAATTTTGTATCCAGTACGACTGCGAATAGAGGTCAATCTAAATCTGAAAGATCTTCTAAGAACGGGGCCACCATCTTAAAACAGGAAATAATGGATACAAATCAATCCAGTTCTTATAATCAATCCTCGGGACAGCAACAACATGTGAACGTAGTAAACAGCAGGATGATGAATCACAGAGAACCCAAAATAGAAATTTCCACGGATAACATAAGACAATCGTTGTTAAGCAGCATGTCGTACactcaacaaaataaaaacgtgCATCAGACTCACCAACAGAACGAAATGTTGATGGTAAGCGCTCCTTCGACTCCTTCAAAACGAATGGATACGAGCAACGAAGACATGACAAACTTCAAACATCAAAACTTTTGTGGTGATACAGTAGTTCTTTTGGATACCGATTCTAGTGGATCCTTAGTTAGCAAAAATGTTGGGTCTTCCATAGTAACCGGTAGTTTCTTCAATGAAACATTAGACTTATCTCAAGAAGACATACAAAAAACCTTATCTGCCAACATGCCACTGTGTTCAAGCGAGTTAGAAGCGCACCAGAATCACAATACCGAAGCAACTAACAGGGGTAGGATCATTACCAGCAAACAGGAGCAGCCCCAACAACACACCAACGTCATTCCCCACCATCATCATGACGTGAATCCGATGGACTTTATCGATAGTTGCGACGTGGTTGTCTCGCCTACCCACGTAGTTGACGACgatgtttttgtaaatttagaCGCGTTTGATATGCTTGGGGAGTTTCCTGATTTGGAAGGTCTAGATTCTGGGCATACTGGCCTTTTAGATGTCAATCCGTCCGAGAACGAACACACAGGAAAAACCAATATAATACAAACCCAATCCAACATGCAAATGGAAATAGCCGCTAAAATTACGGATTATTCCCCCGAATGGGCTTATCCCGAAGGGGGCGTTAAGGTATTGGTCACAGGGCCATGGCATTCGTCAGGTCCTTACACTGTTCTTTTTGATACATTCCCTGTTCCCACAACACTCGTGCAAGATGGTGTGCTGCGTTGTTATTGTCCAGCTCACGAAGCAGGTCTTGCTACATTGCAAGTAGCTTGCAATGGCTGCGTTATATCTAATTCTGTGATATTTGAATACAAGTTACCCCCACGCGAAGAACAAGTTCCTGCTCCAGAGCCTAAAGTAGAACGTTCAAATGATAATTTACTTAAGTTCACTCTACTACAGAGACTAGAGGCTATGGATGATAGACTTCAGATTAAACAAGAACCAGCTGATGGATCAGATCATGTTGAGGACACAACGTTATTTACTCAACCAAATTTTGAAGATCGACTTGTAACATATTGTCAAACAATGACATCTCGGTTGTGGAAATTTGGTGAGGAACTTAGCGTTGCCTGGTTTGCCTGCCATAGAGGCATGACACTATTACACTTGGCTGCATCTTTGGGTTACTCCCGTTTGGTTTGTGCACTGCTTCACTGGAGAGCTGAAAATTCTTCCCTGCTCCTAGAAACTGAAGTTGATGCTTTAAGTCAAGATGAAGATGGATTTACACCTTTGATGTGGGCATGTATCAAGGGTCACACAGAGACGGCAGTAATGCTGTATAAATGGAATCACACTGCGCTgaatatcaaaaataataatcttcaAACTGCGTTAGAATGTGCAAGAGTAAACAGTAATTTAGATTTAGTTAAAGAACTAGAAAAACTGGAAGCTAGACGAGATAAAGCAAGCATGCTACTTCATTCTATAAATTCATATAATGATTCAAATTCATCTCCTACAATCATTTCACCTGCCAGTTCCGTAGCATCCCTAGTCTCGGTAGCTTCTACAAGTAGATCGCATGATGGAGTATTTCTTAGACCCGGAGTAGTTACAAGGAGCGAATCGCATAAGTACAAAATGTTAAACCTAGACATGGATTCAATGAGTCCGTCAGATTCACATCACACAAATTCTTCCAATAAAACAAGCATTTATCTTCCAAACCCATTGCTTTCAGAAGCTAACATACAAAATCGAATTGGTATACATCGTTTAATAAAAAGACCATCTGTCGATAGTGGTATAAACATGACTGGTGGACAGTCAACCGACAGCCTACCATCTTTGAGattgagaaatataaaaaatgcgtGCGGAAATAATCCCAAGTTGTCGAGATTTGACAGAAGTATGTCTCTTCCGTTGAGTTCTCCTTTATCAAATCAGGATAATTCTTTTGATAGTGAGACCTCTGATGGTGTCCATACTCGGAAAATGGATTTTGCTTTATGCGAAGTGGGCAGTGGGCCCCGCAGCAATAGCCCCCTGATTGACGTGGAAGCCGTGTCTGATGATGAATCGGACACCCACAACAGTGCCGTAGGGGAGCAAGATGCTCGAGTGCTAACATTGGCAGAACAGATCATAGCTGCCATGCCAGATCGCATCAAAaatgagAGTGAAGAGATGATGTTAGATCATAGCCCGGGGCCTCCAGAAACCCTACCGTCTAGTGATGCACTTTCTGATGTATTCATGGAACCTTTGCTTGATCAATCTGCATCTAGTTTTGAACCAGCTGAATTCAATTTTGAATTCTCCGATCACAACTATCGgtATTATGATGTCAGCACACCTTGTTCAAGCCTTAGCCCGGCATCATCAAGCTGTCTGCAGTCACCTTGCTCGTTTACATTGGATTCTCCCTCACCACCACCAACAACAGCAgatttttgtgaatttttccAAGCATCTGGAAGTCTATTCGAAAAGGATTTCTCTAATCTTACTTTATCAGATCAAGAACAGAGGGAATTGTATGAAGCTgcgaaaataattcaaaaggcATATCGTTCTTACAAAGGACGGCAGCAACAAGAACAAGATAAAGAAAGAGCAGCTgctattattattcaaaattattacagacGCTATAAGCAATATGCGTATTTCAAGCAAATGACTCATGCAGCAATGGTTATACAGAATGGCTTTAGGTCCTATTGCGAACACAAACGTTTTAAGAAAAACCAGGAAGGATCAGTCAGTATTCAAAGTTACTATCGTAATTATAAAGATTCAAGTGGAAAAGGAAGTCGTGAAAGTACTCCTGCCTTAGGTCTTAAAAGAACGTATTCACAAAGACGCCAACATCAAGCAGCCAGAAAAATACAACAATTCATGAGGCAATCAAAAAATAAATTACAGAGAGAACGAGCAGAAAGAGAGAAGCAGGTGGACCAGTCAGTGGATGTCCACCAAAAGTTACCGTCTCAAGGGGGCAATTCCATCACAGACCCAAATAGCAGGTATCCTATATTTCATACTTTATGCTCTGCGTATGTAGTTGTTTGCAAAGTTTCTTCAAATTGTCCAAAAAACATACTATGGGTGTTCACCAAGGAACTGGGCAGTGTAATATCTCGGAAGTGCATGGTTTGTTTTGAAGTTCCAAGAGTACTCTAA
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLSLWADKKEWTKEELISQLKPMFFSEDEPDLNNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITAAKNEIANTLPSSSSNSRPPSRADNNQVSSTTGSGGMFLTNNHSGRVYSRDGRNHHGQSSGQNSSNSGNTPPLVLSLSQIQGGGGLLILNSNSTTSTSSTTHQSFVAPVSVANFVSSTTANRGQSKSERSSKNGATILKQEIMDTNQSSSYNQSSGQQQHVNVVNSRMMNHREPKIEISTDNIRQSLLSSMSYTQQNKNVHQTHQQNEMLMVSAPSTPSKRMDTSNEDMTNFKHQNFCGDTVVLLDTDSSGSLVSKNVGSSIVTGSFFNETLDLSQEDIQKTLSANMPLCSSELEAHQNHNTEATNRGRIITSKQEQPQQHTNVIPHHHHDVNPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLEGLDSGHTGLLDVNPSENEHTGKTNIIQTQSNMQMEIAAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQDGVLRCYCPAHEAGLATLQVACNGCVISNSVIFEYKLPPREEQVPAPEPKVERSNDNLLKFTLLQRLEAMDDRLQIKQEPADGSDHVEDTTLFTQPNFEDRLVTYCQTMTSRLWKFGEELSVAWFACHRGMTLLHLAASLGYSRLVCALLHWRAENSSLLLETEVDALSQDEDGFTPLMWACIKGHTETAVMLYKWNHTALNIKNNNLQTALECARVNSNLDLVKELEKLEARRDKASMLLHSINSYNDSNSSPTIISPASSVASLVSVASTSRSHDGVFLRPGVVTRSESHKYKMLNLDMDSMSPSDSHHTNSSNKTSIYLPNPLLSEANIQNRIGIHRLIKRPSVDSGINMTGGQSTDSLPSLRLRNIKNACGNNPKLSRFDRSMSLPLSSPLSNQDNSFDSETSDGVHTRKMDFALCEVGSGPRSNSPLIDVEAVSDDESDTHNSAVGEQDARVLTLAEQIIAAMPDRIKNESEEMMLDHSPGPPETLPSSDALSDVFMEPLLDQSASSFEPAEFNFEFSDHNYRYYDVSTPCSSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFFQASGSLFEKDFSNLTLSDQEQRELYEAAKIIQKAYRSYKGRQQQEQDKERAAAIIIQNYYRRYKQYAYFKQMTHAAMVIQNGFRSYCEHKRFKKNQEGSVSIQSYYRNYKDSSGKGSRESTPALGLKRTYSQRRQHQAARKIQQFMRQSKNKLQRERAEREKQVDQSVDVHQKLPSQGGNSITDPNSRYPIFHTLCSAYVVVCKVSSNCPKNILWVFTKELGSVISRKCMVCFEVPRVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2