Sper047206.2
Basic Information
- Insect
- Sinelater perroti
- Gene Symbol
- bab1
- Assembly
- GCA_036346155.1
- Location
- JARFIY010000215.1:3772044-3797362[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-17 6.7e-14 53.6 0.0 1 43 76 119 76 121 0.95 2 2 5.4 1.2e+04 -1.6 1.3 6 15 207 216 205 220 0.87
Sequence Information
- Coding Sequence
- ATGGAAATTTGCCACGGAGGGCCGCGTAGTATTTTCGCCACTTTCATTCACTTCGGGCTCGGAGCCGCCGGGGCGCCGCGGCTAAGAGTCCGGGCGCAGGCCAAGACTTCTGCTCCAGATAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAGCACCAACCAGAGTCTTGTCCACAACCTGCGGTTCCGCGAGCGGGGGCCGCTGAAGTCTTGGCGGCCCGAGACCATGGCGGAGGCGATCTTCTCCGTGCTTAAGGAGGGGCTCTCGCTCTCCCAGGCCGCTAGAAAGTACGACATCCCCTATCCCACTTTCGTGCTGTACGCCAATCGGGTGCACAACATGCTGGGGCCTTCGGCCGACGGAGGCTCAGATTTGAGACCCAAGGGGAGAGGTCGGCCCCAGCGAATTCTGCTTGGTGTGTGGCCGGATGAGCACATCAAAGGAGTGATACGCGCGGTGGTGTTCCGCGACTCTCACCATATTAAGGAGGAGCCGTCGGTACTGTCTTACCCGAGAATGCATgaTGGCGTAGGCCTACCACCAAATTACCCAAACAGCTCTTGCAGTAACGGTTCTGAGTCTACCGTGTCGCCCGGAGCTGCGGCAGCAGCAGCCGTCGCAGCTGTGGCCCAAGGCTTGCGGCAACAAATGTGTAACATGATGGCTGCTGCCCAGCAGCAGAACTCGACACACGACTCCACACTAGCAAACTCTTTGTCTTTGGCAAGCCATTGCGGAAACACAACCACTGTTCCGAGCAATGGCACTGCACCCATGACCATGAGCATGAGCAACATTGCCTCGATGCGCTTAGGCAGCCCCGCCGGCAGCGTACAGGATCTTAGAATCAGCCCAGCGGGCTCCGCCTTGGAGAGCCCCCTGTCCTCCCCTCTTGGATTGACAATGCCAAGCACGATGGAAAGTACCGCTGCACTGAATCTCGGAATGGGAAACAACGTCGATGTTGCCGGGATCGGTGTGAGTGGAATGGCCTACAAACCGGCCAGGCCATTCACATCGCCCAGAGCCGAGAACCTCTTCCAAGAGGACATAGACGAGCTGGTAAAGCCGATGCATGCCTCGACTCCTCGATCAAAAGACACGATGGCTTCCATCAAAATGGAACCACTCACAGAGTGTCGTGGTGAATGA
- Protein Sequence
- MEICHGGPRSIFATFIHFGLGAAGAPRLRVRAQAKTSAPDSYQYQLQSMWQKCWSTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIKGVIRAVVFRDSHHIKEEPSVLSYPRMHDGVGLPPNYPNSSCSNGSESTVSPGAAAAAAVAAVAQGLRQQMCNMMAAAQQQNSTHDSTLANSLSLASHCGNTTTVPSNGTAPMTMSMSNIASMRLGSPAGSVQDLRISPAGSALESPLSSPLGLTMPSTMESTAALNLGMGNNVDVAGIGVSGMAYKPARPFTSPRAENLFQEDIDELVKPMHASTPRSKDTMASIKMEPLTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01210114;
- 90% Identity
- iTF_00398774;
- 80% Identity
- -