Basic Information

Insect: Silvanus unidentatus
Gene Symbol: BCL11A
Assembly: GCA_963930825.1
Location: OZ005760.1:21327881-21344094[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.63 63 4.5 0.0 2 11 28 37 27 40 0.88

2 7 3.9 3.9e+02 2.0 1.8 1 23 190 213 190 213 0.93

3 7 6.5e-06 0.00065 20.2 2.0 1 23 486 508 486 508 0.96

4 7 7.9e-06 0.00079 19.9 4.4 1 23 514 536 514 536 0.99

5 7 5.5e-07 5.5e-05 23.6 3.2 2 23 730 751 729 751 0.97

6 7 7.3e-06 0.00072 20.1 3.3 1 23 757 779 757 779 0.99

7 7 4.7e-05 0.0047 17.5 0.4 1 22 787 808 787 808 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.63	63	4.5	0.0	2	11	28	37	27	40	0.88
2	7	3.9	3.9e+02	2.0	1.8	1	23	190	213	190	213	0.93
3	7	6.5e-06	0.00065	20.2	2.0	1	23	486	508	486	508	0.96
4	7	7.9e-06	0.00079	19.9	4.4	1	23	514	536	514	536	0.99
5	7	5.5e-07	5.5e-05	23.6	3.2	2	23	730	751	729	751	0.97
6	7	7.3e-06	0.00072	20.1	3.3	1	23	757	779	757	779	0.99
7	7	4.7e-05	0.0047	17.5	0.4	1	22	787	808	787	808	0.97

Sequence Information

Coding Sequence: ATGAGAATTAAAATGCCCGCTGTTCGTATCGCTCAAGCAGATGCAGACGGCTCGGAATCAGATATCCATCAAGACATTTTGACTTGTGGAATCTGCCAGAAGACGTTCGCACTCGCCGACATCGTCCGCTTTATCCAACACAAAGTCGCCTCGTGCAATAAGGAGAACTTTGGCCAGTGTTATACCAACACCGATCGGGAGCGTGAAAATGACGATGGCTCCTTACCTCTGTCTACCATCAATACCAGACGGCCAAGCATATCGGCCCCGATTTCCACCAAGAAAACGGCAGCCTCGAACCGTGTGCATACACCGCCACCGGCGTCTCCCCGACTCCCGGCACCTGGTGACTTGTGCGTGGATGGGGCCGCCTCCTCTACACCAAAGCGTCGCGCTTCGTCCCCTCTGACCAGTTCCAGCCTCGAAGACGGCGAAGATATTAAGCCGAGCATAAAACAGGAACGTATGGAAACAACGATGTCACCAGATGAGAATAGTCATTGCAAAAAATCGAGAACGGAAGTGGCAGATGCTGAATCGAATACTACGCACAGTGaACCCAGCAACTATGTGTGCTCTACGTGTAAGGCACGTCTTCATTCCGCTTGGCGACTGGTGCAGCACGTGCAACACTCGCATGGTATTAAAATCTACGTGGAAAGCTCTCCATCGAGCAGTAAAAGTGGCAACAACAACAATCACAGTACAAGCAGTGCCAGTAGCAGTTCTTCTGGTTGTTCCTCCGGTGGCCCGCCGCCTCCGCCAAATATGCGACACCCTCTGTTACCTCCACCCGATCTACACAATCCTTTCGGCGTGGGCAGTCTTCTTCGCCTACCTCTTCCACCCTTGAACCATGGCCACGTCCCGCCCGCTCCTCTGTTCTCTCGTCCCGAACATCACTACCGAATCGATCAGTTTGTCAGCGAACAGTTCCGTCACCACGGCATGACTCTGGCTGCGGCAGCGGCCGCCGTTGCGGCAGGCTCAGTACCACCGCCACACTCCAATTTCCCATCGCCAGCTGAACGATCAAATTCAGTGTCAAGTGTGCCGTCAAGGGAACGAAGCACCCCAAATCAGCCACTTTCACTTGAACCTCAGTTGGATTTTTACTCGCAGCGGTTGAGGCAACTCGCTGGTACAACCAGTCCGGGGGCCGCTCAAGCGAGCTCGCCGTCTCCCCGGAAGCACTCACCGCCATTTACAAGTCCGTCGCCCTCGCAAATACCACCAACAAGCTTACCAAATAACATCAGCTCGAGCAGTaccaacagcaacaacaacaataacaacaacaacaacagtaGCAGCAACAGCGGAGGCAGCAGTCGGCCGCCAAGCGCGTCTCCGCCTAGCGGCAAAGAGGACCAGTTGGTGAACACGCCAAGGTCGGCGTCCACGCCGCCCGGCAAGCCAGGCTCACCAAGAAATTCCTCTTCGGCCGATGCGGTACACGCATGTGAGTACTGCGGCAAGAAGTTCCGATATCCCCTGAAATTGGAGGTACATCGTCGAACGCACACCGGTGAATTGCCCTATAAATGCACGGTTTGCGATCATGCATGTGCTCAAAGTTCGAAACTGAAACGACACATGAAAATACATCGAACGCCAGAAGATCGTACCAGTAATGCGGGTTCGGTCGAAACGCTGGACGGTGAGGACAGTGAGGAGGACGATGAATTAGACGATGATGATGAAGAGGAGGAGGAATTGGAAGCGGAAGAGGAGGAGGCAGAAGATTTAAGTGTTCCTAGTCAAATATCAGCGAAAAATCCTAATCAATCAGCCTCCCTAGTGGGCGAATTGATGGACAAGTTCGGTTTGAGTAACATTGCTCAGTATAGTGAGGCATACAAGCAAGCGATTCAGGAGTCAAATGCAGCtttaaaattacaaatggcTAATAAAGATCGCGATAACAATAACAGTACCTCGTTATCGAATCAAATCAAAATGAGGGAAGAGTTCGCCAAGGGTCTTTTGCCCGCACCACCTACAACGCCATTGCCACTCTTTCCTCCGTTCAATAACGACTCGTACGAGGCGACAAAACGGCTTAAGTTGGACCTGGAACGGAACGATTGGTGGCTGTCGGGCTTGAATCGTGAAACGAAAGGAGTTCCTGGTCCCAGTGCACTATTGCCGAATCCATTGTTGAAAAAGGAAAGTCGTCGTAATGACACCTGCGAATTTTGTGGCAAAGTGTTCAAAAACTGTTCGAATTTAACGGTACACCGTAGATCACATACGGGCGAAAAACCATACAAATGTGAGTTATGTTCCTATGCTTGTGCGCAAAGTTCAAAGTTAACGCGTCACATGAAAACGCACGGTCGAATCGGTAAAGACGTATACAGGTGTAGGTTCTGTGAGATGCCGTTTTCTGTACCATCAACACTCGAAAAGCACATGAGAAAGTGTGTGGTTAATCAGGGAAAGGGCCATTTACTTAACACTATGCCTATGCTATCAGGCGACGAAGATTCATCAGCTAGTATCGCCTCCAAGGAGGCCACATGA
Protein Sequence: MRIKMPAVRIAQADADGSESDIHQDILTCGICQKTFALADIVRFIQHKVASCNKENFGQCYTNTDRERENDDGSLPLSTINTRRPSISAPISTKKTAASNRVHTPPPASPRLPAPGDLCVDGAASSTPKRRASSPLTSSSLEDGEDIKPSIKQERMETTMSPDENSHCKKSRTEVADAESNTTHSEPSNYVCSTCKARLHSAWRLVQHVQHSHGIKIYVESSPSSSKSGNNNNHSTSSASSSSSGCSSGGPPPPPNMRHPLLPPPDLHNPFGVGSLLRLPLPPLNHGHVPPAPLFSRPEHHYRIDQFVSEQFRHHGMTLAAAAAAVAAGSVPPPHSNFPSPAERSNSVSSVPSRERSTPNQPLSLEPQLDFYSQRLRQLAGTTSPGAAQASSPSPRKHSPPFTSPSPSQIPPTSLPNNISSSSTNSNNNNNNNNNSSSNSGGSSRPPSASPPSGKEDQLVNTPRSASTPPGKPGSPRNSSSADAVHACEYCGKKFRYPLKLEVHRRTHTGELPYKCTVCDHACAQSSKLKRHMKIHRTPEDRTSNAGSVETLDGEDSEEDDELDDDDEEEEELEAEEEEAEDLSVPSQISAKNPNQSASLVGELMDKFGLSNIAQYSEAYKQAIQESNAALKLQMANKDRDNNNSTSLSNQIKMREEFAKGLLPAPPTTPLPLFPPFNNDSYEATKRLKLDLERNDWWLSGLNRETKGVPGPSALLPNPLLKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRIGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQGKGHLLNTMPMLSGDEDSSASIASKEAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01290764;
90% Identity: iTF_01121977;
80% Identity: -