Basic Information

Insect: Silvanus unidentatus
Gene Symbol: Rreb1
Assembly: GCA_963930825.1
Location: OZ005759.1:23168937-23173939[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.2e-05 0.0012 19.4 1.0 1 23 68 90 68 90 0.99

2 16 6.4e-05 0.0063 17.1 0.2 1 23 104 126 104 126 0.97

3 16 4e-05 0.004 17.7 6.4 1 23 132 154 132 154 0.98

4 16 0.1 10 7.0 0.1 1 23 217 241 217 241 0.87

5 16 0.013 1.2 9.9 1.0 2 23 247 268 246 268 0.96

6 16 4.9 4.9e+02 1.7 0.9 1 20 314 333 314 335 0.84

7 16 0.049 4.8 8.0 0.1 1 23 458 480 458 480 0.96

8 16 3.3e-05 0.0033 18.0 1.9 1 23 489 511 489 511 0.98

9 16 0.00056 0.055 14.1 3.1 1 23 517 540 517 540 0.97

10 16 0.00033 0.033 14.8 3.0 1 23 884 907 884 907 0.97

11 16 0.00033 0.033 14.8 0.4 2 23 1113 1134 1112 1134 0.97

12 16 0.085 8.4 7.3 6.3 1 23 1140 1163 1140 1163 0.97

13 16 0.0084 0.84 10.4 1.2 1 20 1191 1211 1191 1212 0.95

14 16 0.12 12 6.8 0.6 1 23 1269 1292 1269 1292 0.94

15 16 0.011 1.1 10.0 0.4 3 23 1339 1359 1337 1359 0.93

16 16 0.0051 0.5 11.1 5.9 1 23 1365 1387 1365 1387 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.2e-05	0.0012	19.4	1.0	1	23	68	90	68	90	0.99
2	16	6.4e-05	0.0063	17.1	0.2	1	23	104	126	104	126	0.97
3	16	4e-05	0.004	17.7	6.4	1	23	132	154	132	154	0.98
4	16	0.1	10	7.0	0.1	1	23	217	241	217	241	0.87
5	16	0.013	1.2	9.9	1.0	2	23	247	268	246	268	0.96
6	16	4.9	4.9e+02	1.7	0.9	1	20	314	333	314	335	0.84
7	16	0.049	4.8	8.0	0.1	1	23	458	480	458	480	0.96
8	16	3.3e-05	0.0033	18.0	1.9	1	23	489	511	489	511	0.98
9	16	0.00056	0.055	14.1	3.1	1	23	517	540	517	540	0.97
10	16	0.00033	0.033	14.8	3.0	1	23	884	907	884	907	0.97
11	16	0.00033	0.033	14.8	0.4	2	23	1113	1134	1112	1134	0.97
12	16	0.085	8.4	7.3	6.3	1	23	1140	1163	1140	1163	0.97
13	16	0.0084	0.84	10.4	1.2	1	20	1191	1211	1191	1212	0.95
14	16	0.12	12	6.8	0.6	1	23	1269	1292	1269	1292	0.94
15	16	0.011	1.1	10.0	0.4	3	23	1339	1359	1337	1359	0.93
16	16	0.0051	0.5	11.1	5.9	1	23	1365	1387	1365	1387	0.98

Sequence Information

Coding Sequence: ATGCAAGGGGTGGTTTGTCTGCCTCAGAATCTACAGCAAGGCTCCCCGCCTCCGAATAGTACCATAGTTATCGACATGGAAATGGACTCCAAAGACGCAAATCTGAACCAAAGCGACTCGGGCATCTTCTCCGCCACCAACACCACAATGGACGGCCACACAGACGACAATCGGAGCGATTGCAGCACGCCAGAACGCAAATACGTGTGTCCCATATGCGAGAAAATGCTCACATCGCAGCACGATTTCACATTGCACATCCGGTCGCATAATAACGAGTCGGCCGAATTGCAGGATAACGAAAAGGGCTTCGTTTGTCGCATATGCAACAAAGTGTTGAGTTCCAGTTCGAGTTTGGATCGGCATGTGTTGGTGCACAGTGGCGAGCGGCCGTTCCATTGTAAATATTGCGGCGACACGTTCACCACCAACGGCAACATGCATCGCCATATGCGAACGCACAAGAACGACAACAACTACGAGTCGGATGGCAGTGTGGAGAGCAATGCGAGTGCCAACTCCAAAACCGAAtacaataacaacaaaatCGAATCAAAGTCGAATTTGAAACGGAAACTGGACACTCCGAACGACGTGTCGGAGAGTAAACGACGCGACGTGCAGATAAATGGCGATAATCGGCAAACATTCAAATGTCCAGTGTGCGATCGAGCGGATTTCGACACAATGACCAATCTGGAAACGCACCTAGAGGACAATCATCCCGAATACCCATCGAAATGCGGTCAATGCAAGCAAATTTTCCCCAATAACAAATTGTTGAGCATTCATAAAACGTCACACGATCATTGTGTAACCAAGCATCCAGTTGTCGGTTTTAAGGATTTAACGTTCGTCGATTTTTCAAGTGAGAAATTTCCACATATCGCTCGACGTGAATGCGAAATGAATTTACATAAAGTGGCTGGCGGATTGAAGTTTCAATGTAAACGGTGTGCACGTGCGTTCCCGTGTACGAATTCATTGGAGATACATGAGAAGAATTGTGTGACGGTGGAGATGGGTGGCGGTTTGGATTTGAGTAAGACGAACGATTCGGAAATCAGACGATTGGAATTCTTCTCTAGACTGAATTTACAAGACAATTCACCGGAGAAGAAGAGTTTCCTGCAAGAGAATCCGACGAAATTGAGAGAGCAATTGGCGAAAGCGATTTGCATGGATTCCAATAAGGATTTGGCGGATATTCAATCGATTCTGACCAATATTAATCTGCAGCAACAGAAACATGCCGGGTTGAGTGGCGGCGGTAAGAGTTTCGATACGGAATCCATGAAAAATGAACAACAGGAGGAAGAGTCGCAGGATTTGTTCGCTGTTGAGTTTCGTAAGATGAAGTTACGTGGTGAGTTTCCATGTCGACTGTGTACGGCGGTGTTTCCCAATTTGAGGGCGTTGAAGGGACATAATAGGGCGCATTTAAGTGGCAACAATAATGGCACTTACCATTGCAACATGTGTCCGCATTCGTCGATTGATAAAGCGGCGTTAATAAGACATATGAGAACGCATAATGGAGACAGACCGTACGAATGTTCGTTATGTAATTATGCGTTCACCACAAAAGCGAACTGTGAACGGCATTTGAGGAACCGGCATGCGAAAAGTACCAGAGAGGAAGTGAAAAAGGCGATCATTTACCATCCGTCCGAGGATCCGACCAATGAAGATCTAAATAAATTGACAGCCAGAGAAAATGATGGGAAAAAATTGAATGTTAGCGTAACGGAGGCGGGCGAAGGGAGTCCGGAGAAATTGCATTGTTCCACACCGAAATTGGAACGTTCTGAAATCAAAGCGGAGATTTTCAAGCCGAATTTGCCACCACTGATCCCCGATCTGCGTAAACTCAAACCGCAATTTTTCAACGACATTTTAAGGGGCAACAAATTGCATGAACCTAACGGCATACCGCCGTATTTCCCACCGAAATTACCCACTTCCCCATCCAAGATTCAAGTGAAGAGTTTGGAGACGTTGAAGAACTACGAACAGTCAGATGACGAGTTTGTGGACGAAGAGGAGGAGCCGATGGTGTTGGATTTAAGTAAAAAGAAGAAAGAGGAACGGAAACGGTTGGATTCCGAGGACGGGCCGCAGGATCTAACAAAGAAATCACCACCATTGCCACCACCGTTTATGGGCGACATATTCGCGCAGCAATTGCTGAAAACGCCACCGAAAATCGATCCGACTGCATTGTACGCCAGTCAATTGGCTCGATTTTATCAGAACAGTTTCCCGAATTGGGCCGGTTTTCCAATAAATCCACTACTGTTCCCCGCCATGGCACCGATGGCCGCCAATCCACAAGAACTCAAAGAACGTATGCAACGTTTGCAATTGTGCGGCGGTTCGTTTATCGCTGAGGACTTGAAACATATCCAGAACTTGCAGCAGCAGTCGATGCGCTACAACGGTTTCAAAATGGAAACGAAATTGGATGAGAGAAAATCGGAGGACTTGAAACCGTTGACGGTGGAGACGGGATTCCACGAGTCGATCAGCAAATTACAAAGTCCCTCCGGTAAGGATTTGATGCAGAGTCCGAATTCCGTCAAGATGGTGATTAAGAATGGCGTTTTAATGCCGAAACAGAAACAACGTCGGTACCGCACCGAACGACCGTTCACTTGTGAACATTGTTCAGCGCGTTTTACGCTCCGCTCGAATATGGAGCGACACATTAAACAGCAACATCCGCAATTCTGGTCGCAACGACAGCGCGGCAGTGTCGGCAATCCGGGCCGGAAGAGCCATGCGATGAAGACGGGCTACTGTGATCTCAGCATACCAAACTACGAAGTACCAAAGACGTCCGAATATGAGGACAGCAAAGAGCATCTGAATGAGAAACTGAAATTTGCCATTTTGGCACAACAGCTGAGAGCGGCTGTTAATCAGCCGGATATAAAAAAGGAGGAGATCGATGAGGATGCACTGGTGATTGATGAGAATGACAAGAAGACTGAGGAGAAACACCAACGACCGTACGAGGGTAGCAAGATACTGGAGGAGAAATTGAACGAATATCAAAATGTGAATAGAGAGAAAAAGAATGAGGAAAGTCAGGATTTGGTGCCGGTTTCCAGATTGCTGGACAACGCGTCACAACAGCAGTTTAAAGAGTATTTTAAGCGTGATGGGGAAGAACAAGAGGTTGGAGGTGTTAGTGAGGAGGATGAAGAGGGTTTGGTGGCGAGTGGGAGTACGAGCGAAGGCAACGTCTCCGGCACCGACGAGAACAAATCCGAATCGGAGACTGTTGTCCCCGTTAAAAAGAAATCCGCCTATTCATTGGCACCGAATCGCGTCAGTTGTCCATACTGTAGCCGGAAATTCCCGTGGACATCGTCGTTACGTCGTCACATTCTCACACACACCGGCCAAAAACCGTTCAAGTGCAGTCATTGTCCACTCTTGTTCACCACCAAGTCGAATTGCGATCGACATTTGCTACGTAAACATGGCAATTCAGCGATGACCATCACCAATGACCAACAGAATAACAATTCGAATTTTTTAATACGGAACGTGCCCGAGCGGCCGTTCAAGTGCTCCAATTGTCCCAGTAGCACGTTCTCAACTTACTCGAATCTGAAGAAGCATATCAGTTGTAAACATTCGACCAATGCCCAAGGGGACGATATCAAAGCGCAGGGCTACGAGGCGGGCAGTTCGGAGGACGAGAAAGTGAGCGGTGTGGAGAAGAGTGATTGGGAGCCGGCCGTGTACAGTGCCAAATTGGCGGATAACAGTCAAGTGCAGAACTGCGATTTGCCGTTCAAGTGTCATTTGTGTGACGGCTCATTTGGCGAACGACAGGACGCATTGGAGCACATACGCGACAAACATGCGTCCGAGTACGATTTGCTCATGTCGAAGAATGCGTTGGACAGTAATGCGACCACACCGGACGACAGTGGCCACCATGACGAGGAGGAGAGCGAGATTCGGGGTAAGTTTCCGGACTACTCGAATCGGAAGGTGATCTGTGCGTTTTGTATGCGCCGTTTCTGGTCGGCGGAGGACCTGAGGAGGCACATGCGGACGCATACGGGCGAGAGACCGTTCAGTTGCGATATTTGTCGACGACGGTTCACATTGAAGCACAGCATGTTGAGGCATAGGAAGAAGCACAATTTCGAGAATGATAATGTGAGCGATGAGGATGGGAATCAGGTGCCGTTTGAGAAGTTTGTTAAAGGAGAGAATAACAATGTGCAGAAACAGGAGAAGACGGATGAGTCGGATGGGAATGAAGGGGGTGATTTGATAAGTAATTTGTTGGGGATTAGGGATCGGTCGATTATTGATAAGGTTTTGGCGGCTTCGGCTGATGATGCAGCCAAATTATTGGGCGTCAAGAATGGCGTTAAAGAGTAG
Protein Sequence: MQGVVCLPQNLQQGSPPPNSTIVIDMEMDSKDANLNQSDSGIFSATNTTMDGHTDDNRSDCSTPERKYVCPICEKMLTSQHDFTLHIRSHNNESAELQDNEKGFVCRICNKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRTHKNDNNYESDGSVESNASANSKTEYNNNKIESKSNLKRKLDTPNDVSESKRRDVQINGDNRQTFKCPVCDRADFDTMTNLETHLEDNHPEYPSKCGQCKQIFPNNKLLSIHKTSHDHCVTKHPVVGFKDLTFVDFSSEKFPHIARRECEMNLHKVAGGLKFQCKRCARAFPCTNSLEIHEKNCVTVEMGGGLDLSKTNDSEIRRLEFFSRLNLQDNSPEKKSFLQENPTKLREQLAKAICMDSNKDLADIQSILTNINLQQQKHAGLSGGGKSFDTESMKNEQQEEESQDLFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLSGNNNGTYHCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREEVKKAIIYHPSEDPTNEDLNKLTARENDGKKLNVSVTEAGEGSPEKLHCSTPKLERSEIKAEIFKPNLPPLIPDLRKLKPQFFNDILRGNKLHEPNGIPPYFPPKLPTSPSKIQVKSLETLKNYEQSDDEFVDEEEEPMVLDLSKKKKEERKRLDSEDGPQDLTKKSPPLPPPFMGDIFAQQLLKTPPKIDPTALYASQLARFYQNSFPNWAGFPINPLLFPAMAPMAANPQELKERMQRLQLCGGSFIAEDLKHIQNLQQQSMRYNGFKMETKLDERKSEDLKPLTVETGFHESISKLQSPSGKDLMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGSVGNPGRKSHAMKTGYCDLSIPNYEVPKTSEYEDSKEHLNEKLKFAILAQQLRAAVNQPDIKKEEIDEDALVIDENDKKTEEKHQRPYEGSKILEEKLNEYQNVNREKKNEESQDLVPVSRLLDNASQQQFKEYFKRDGEEQEVGGVSEEDEEGLVASGSTSEGNVSGTDENKSESETVVPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSAMTITNDQQNNNSNFLIRNVPERPFKCSNCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVSGVEKSDWEPAVYSAKLADNSQVQNCDLPFKCHLCDGSFGERQDALEHIRDKHASEYDLLMSKNALDSNATTPDDSGHHDEEESEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNFENDNVSDEDGNQVPFEKFVKGENNNVQKQEKTDESDGNEGGDLISNLLGIRDRSIIDKVLAASADDAAKLLGVKNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01121926;
90% Identity: -
80% Identity: -