Basic Information

Insect: Silvanus unidentatus
Gene Symbol: ZNF556
Assembly: GCA_963930825.1
Location: OZ005757.1:26531574-26534675[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.1e-05 0.0021 18.6 0.7 1 23 141 163 141 163 0.95

2 15 0.00095 0.094 13.4 1.2 3 23 171 191 170 191 0.99

3 15 8.1e-05 0.008 16.8 0.1 1 23 295 317 295 317 0.98

4 15 0.008 0.79 10.5 0.2 1 23 323 346 323 346 0.96

5 15 9.9e-08 9.8e-06 25.9 2.7 1 23 372 394 372 394 0.98

6 15 0.0054 0.53 11.0 0.0 1 23 407 429 407 429 0.95

7 15 0.011 1.1 10.1 0.2 1 23 435 458 435 458 0.97

8 15 0.045 4.4 8.1 1.9 2 19 466 483 466 484 0.96

9 15 0.00012 0.012 16.2 3.4 1 23 493 515 493 515 0.97

10 15 0.0035 0.34 11.6 0.3 3 23 522 542 520 542 0.96

11 15 6.8e-06 0.00067 20.2 0.4 1 23 550 572 550 572 0.98

12 15 0.0029 0.29 11.9 0.2 3 23 580 600 578 600 0.97

13 15 9.4e-05 0.0093 16.6 0.3 1 23 606 628 606 629 0.95

14 15 0.027 2.7 8.8 1.5 1 23 643 665 643 665 0.96

15 15 0.00033 0.032 14.9 0.1 1 20 1010 1029 1010 1032 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.1e-05	0.0021	18.6	0.7	1	23	141	163	141	163	0.95
2	15	0.00095	0.094	13.4	1.2	3	23	171	191	170	191	0.99
3	15	8.1e-05	0.008	16.8	0.1	1	23	295	317	295	317	0.98
4	15	0.008	0.79	10.5	0.2	1	23	323	346	323	346	0.96
5	15	9.9e-08	9.8e-06	25.9	2.7	1	23	372	394	372	394	0.98
6	15	0.0054	0.53	11.0	0.0	1	23	407	429	407	429	0.95
7	15	0.011	1.1	10.1	0.2	1	23	435	458	435	458	0.97
8	15	0.045	4.4	8.1	1.9	2	19	466	483	466	484	0.96
9	15	0.00012	0.012	16.2	3.4	1	23	493	515	493	515	0.97
10	15	0.0035	0.34	11.6	0.3	3	23	522	542	520	542	0.96
11	15	6.8e-06	0.00067	20.2	0.4	1	23	550	572	550	572	0.98
12	15	0.0029	0.29	11.9	0.2	3	23	580	600	578	600	0.97
13	15	9.4e-05	0.0093	16.6	0.3	1	23	606	628	606	629	0.95
14	15	0.027	2.7	8.8	1.5	1	23	643	665	643	665	0.96
15	15	0.00033	0.032	14.9	0.1	1	20	1010	1029	1010	1032	0.94

Sequence Information

Coding Sequence: ATGGAGGAATCATTTGGCTTGACTTGGGAGGATTCGGCAACAGTTGTACAAACTGAGGAAGTGATATGTGGCATTGAGAATGAAATCCTCCCATCTGAATCCGAAGAGTTTACCGGCGTTGCCGAAGAGGTGACTGTCGAAGAGACGGCCGGCACAAGTCAAGAAAATGTGCCCATTATGTATTTATCCGATGGCAATGTTCTGGTAATGCAACAAGGAGGTGACGCAACATTCCAAGAGCAGTTTATTGATTGCAATGAAGTGACAGAGGAGGTGGTCACCGAACAATGGGTGGGCGATTGTCCAGAGGAAATTGTCGTCGGCTCTGAAGAAGCCGTTGGCGAAGCAGACGAACAGCAAAATGACGACTGTGAAATCCCATTACCGACCGATCAAGATGAATATACAGCAGCCAGACCGTATCCATGTGACTTTTGCAGTCGCCGGTTTCGCAAAAAAGCGAATCTAATGAATCACATGGTCGCCCATCAAACCGATCGTCCACATGGCTGTAATTTATGTGGCGTTCGTTACATAAGGAAATGCGATCTAATGAATCACTTGAAAATACACGCTTATATACCGGATGCAACCGGATTTGAAGAGGAAGAAGTACAAATACCAATAGAGGATGAATTTGATGGTCGTAAACGACAGAAAACAATATTCAtaaaaaaacgtaagaaaacaaaaattaaagaagaattAGACTCGTCTGCCGATGGCGACGAGACAGGAGCGTCCAGTTCACGTGCATACAGTTACGTGGACGAAGATATGCGTTTAATGGAAGCAATGGCCAATAACAAAGCTGAATATACTGAATATTTACAAAACAATCAAGGCGAAGTTAGATATCCAGTGACAGATCCAAACAAACCGTTTGTATGTCAACATTGCGGTGTTGGTTTTGCACGTGAGAAAGCATTAGCGAGTCACGCCCGAATCCATGGCGGTGACAGTCCATTTGAGTGTCAGAAATGCGGTGAAATGTTCTGGGATTTAGCACTGATGAGGGAACATTTACGTAACAAACATGGCGATATTGAAGAGTTTGAGGATGACGATGAAGAGGACGCTGATTATTCAGACACCGATGTGAAATATGGCACTTATTATTGTCCCACTTGTGGCTTATCTTTTCATCGACAGGACAATTTACGTCGTCATCAGCGTATCCATGTGAAAGAAGAGTTTGCAAACGAACATGAATTCGGTCATGTTTGTAATGTGTGCGGGGAATCGTTTCAAGAGGCTTTAGATCTGCTTGCACACGCCGAAATCCATGCACGTGGCTCCGAGCATCGGTGTATGATTTGCGGTGAGGTGTGTGCGGATGATAGCGCTGTAGCCGCTCATGTCCAAACAAAACACGGCAAAACATTGCCACCAAACACTTGCATGCTTTGTGGACGAACATGCAAAGATCGTCGCACATTATTGAAACATTCATGGGAACATTCGAAGGAGAAAATGTACGCGTGTTCGAAGTGTGCGAAAACGTTTCATAATAAAGCACGTCTGAAACGTCATATGTTGTCGCATCGCAATAAAGTTGTCAATTGTGATGTGTGCGGTGAGGAGTTTCCGGATGGACGTTCATTAATGAACCATCGACACAGTCATAGTAGCGTGTCTGGTAGACAGTTTCCTTGTCGAGAGTGTGGTAAAACGTTTGGTTCGCGCAGTTCGCAACAGATTCATATAAGGATACATACTGGTGAACGGCCGTATGGGTGTAGATTCTGTTGGAAAGCGTTCGCTGATGGTGGCACATTAAGGAAACATGAACGTATTCATACTGGTGAAAAGCCGTACGCTTGTGCCGTTTGTCCAAGAGCGTTTAATCAACGTGTGGTGTTGAGAGAACATATAAGATCACACCATTCTGGACCGGATCCGAAATATTTGCACAGTGTAACGCCGTATTGTTGTTCGGTGTGTTCCGATATGTTTGCAACAAGTCAAGATTTAATTGTACATTTAATACATCATTGCGATATGAATACGGCAATGAAAAGGCAACCGCAAATTGGTCCGAGAAAATATAAGAGAAGGAGAAAATTGAAACCGCATGAATTAGAATTGATAACTAGTCGAGCGGAAAGGGAATCGATTGAAACGGAAGAACAGGAGGAAGAAGTGATTACATATAGTGATCAATCGGATGATGAACAAGCGAAACGAAGAAAACAAAAGTTTAAACAAACACCGAAGAATAATTCACCAAAACAACAGAGTATTAATGATACGTACACTGATTTGTATAATAGTTGTTCATCGGCTATTGAGAATATCAATTCAATTGTGAATTCGAAAACGAAtgcaaaaaataaaaaggCCAAATTGAAGGTGGAACAATCGGTGCCGTCGCGACCGAAAATGATACATACACAAAAGACACGAGTACCATTAGAGCCAGGTGAGGATGGAAAGGTGCGTCATAAGACGAGAACATTGGTGACAAGAACACAACCGACTGAATTACGTTCAGCGACTGGTGAACGGATTCGTCCACGTACAAAGAATGTCAGTTATCATGTGTTGAATGCGGACAAATTGCCATTGGCCACATTTCCACAAGAGGACGATACGGAACAAGCggtgaataatttattgaaagAAGATATGGGCGATGTGAATCATGATGAGAGTAATGGTGTGGTTTATATGGACCAAGTGGAGCATCCGCCTGAAGTGGCTGCCGAACAGACGGTGGAAATTGAGGAGCCGGAGCCGGTGACGTTAGTTAAATTGAATGATGAGAATCGAATTAAGACACGTTCGAGTACGAATAGTTTGAAACCGGGCCGACATATAATTGGACCGGCTGGTAAAGTGGTGCGTTTAGTGAAAGAGGGAATGATTGTGTCGAAGGCGAAGAAATTGGATGAGAATGAACCGGAGTCGATATTACCTGATAAGCCGGTACAAGTGAAACAGGAGATGGTGATTAAGCAGGAGATTGTGGATCCGAGTCCATTGCATGAATTGGCAGAGATATCGATGCAACATGCACAGAATTTGTTTAAATGTGAAATGTGCAGTGAAGTGTTTACTGATAGGGCACAATTATTGGTTCATGTACCTATACATATTTGA
Protein Sequence: MEESFGLTWEDSATVVQTEEVICGIENEILPSESEEFTGVAEEVTVEETAGTSQENVPIMYLSDGNVLVMQQGGDATFQEQFIDCNEVTEEVVTEQWVGDCPEEIVVGSEEAVGEADEQQNDDCEIPLPTDQDEYTAARPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLMNHLKIHAYIPDATGFEEEEVQIPIEDEFDGRKRQKTIFIKKRKKTKIKEELDSSADGDETGASSSRAYSYVDEDMRLMEAMANNKAEYTEYLQNNQGEVRYPVTDPNKPFVCQHCGVGFAREKALASHARIHGGDSPFECQKCGEMFWDLALMREHLRNKHGDIEEFEDDDEEDADYSDTDVKYGTYYCPTCGLSFHRQDNLRRHQRIHVKEEFANEHEFGHVCNVCGESFQEALDLLAHAEIHARGSEHRCMICGEVCADDSAVAAHVQTKHGKTLPPNTCMLCGRTCKDRRTLLKHSWEHSKEKMYACSKCAKTFHNKARLKRHMLSHRNKVVNCDVCGEEFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYLHSVTPYCCSVCSDMFATSQDLIVHLIHHCDMNTAMKRQPQIGPRKYKRRRKLKPHELELITSRAERESIETEEQEEEVITYSDQSDDEQAKRRKQKFKQTPKNNSPKQQSINDTYTDLYNSCSSAIENINSIVNSKTNAKNKKAKLKVEQSVPSRPKMIHTQKTRVPLEPGEDGKVRHKTRTLVTRTQPTELRSATGERIRPRTKNVSYHVLNADKLPLATFPQEDDTEQAVNNLLKEDMGDVNHDESNGVVYMDQVEHPPEVAAEQTVEIEEPEPVTLVKLNDENRIKTRSSTNSLKPGRHIIGPAGKVVRLVKEGMIVSKAKKLDENEPESILPDKPVQVKQEMVIKQEIVDPSPLHELAEISMQHAQNLFKCEMCSEVFTDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01121902;
90% Identity: iTF_01121902;
80% Identity: -