Basic Information

Insect: Silvanus unidentatus
Gene Symbol: -
Assembly: GCA_963930825.1
Location: OZ005759.1:4918994-4924076[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.6e-05 0.0086 16.7 4.9 1 23 347 369 347 369 0.99

2 14 2.4e-06 0.00024 21.6 3.0 1 23 375 397 375 397 0.98

3 14 4.6e-05 0.0045 17.5 3.2 1 23 403 425 403 425 0.97

4 14 8e-06 0.00079 19.9 2.1 1 23 431 453 431 453 0.98

5 14 0.00015 0.015 15.9 5.1 1 23 459 481 459 481 0.97

6 14 2.4e-05 0.0024 18.4 0.6 1 23 487 509 487 509 0.98

7 14 6.8e-05 0.0067 17.0 1.3 1 23 515 537 515 537 0.98

8 14 1.3e-06 0.00013 22.4 1.3 1 23 543 565 543 565 0.99

9 14 1.7e-07 1.7e-05 25.2 0.8 1 23 571 593 571 593 0.98

10 14 2.8e-05 0.0028 18.2 1.8 1 23 599 621 599 621 0.98

11 14 1.4e-06 0.00014 22.3 0.9 1 23 627 649 627 649 0.97

12 14 0.00019 0.019 15.6 3.7 1 23 655 677 655 677 0.98

13 14 2e-06 0.0002 21.8 2.0 1 23 683 705 683 705 0.99

14 14 1.9e-05 0.0019 18.7 1.9 1 23 711 733 711 734 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.6e-05	0.0086	16.7	4.9	1	23	347	369	347	369	0.99
2	14	2.4e-06	0.00024	21.6	3.0	1	23	375	397	375	397	0.98
3	14	4.6e-05	0.0045	17.5	3.2	1	23	403	425	403	425	0.97
4	14	8e-06	0.00079	19.9	2.1	1	23	431	453	431	453	0.98
5	14	0.00015	0.015	15.9	5.1	1	23	459	481	459	481	0.97
6	14	2.4e-05	0.0024	18.4	0.6	1	23	487	509	487	509	0.98
7	14	6.8e-05	0.0067	17.0	1.3	1	23	515	537	515	537	0.98
8	14	1.3e-06	0.00013	22.4	1.3	1	23	543	565	543	565	0.99
9	14	1.7e-07	1.7e-05	25.2	0.8	1	23	571	593	571	593	0.98
10	14	2.8e-05	0.0028	18.2	1.8	1	23	599	621	599	621	0.98
11	14	1.4e-06	0.00014	22.3	0.9	1	23	627	649	627	649	0.97
12	14	0.00019	0.019	15.6	3.7	1	23	655	677	655	677	0.98
13	14	2e-06	0.0002	21.8	2.0	1	23	683	705	683	705	0.99
14	14	1.9e-05	0.0019	18.7	1.9	1	23	711	733	711	734	0.96

Sequence Information

Coding Sequence: ATGTGTCACATATTGGACAGAGAACATAAAAATGATCGATGTTTAAAACCTTGTTTGAAAAAACTGTGTCCCAATCCTGAGCATCTTTGcaagaaaaattgttatgaAGTTTGTGGCCCATGTACGTATCCGAAACAATGTCGCTTAGATTGTGACCATGAAGTCACTATGGCCTGTTCAGATGATCcaaaaaagtttttttgttACGTACAAGTTGAAACAACATTACTTTGTGGTCATAAAACGATAAAAAAGCGCCatgaagatattaataaaatgcGATGTAAAGTTGCATGTTCATTTCAAATAAAACGTTGTGGCCATGCTTGTGAAATGACCTGCCACGTTAATGAAGATCCCGACCATATCTCAGTAAATTCTATAAAAGAGTGTACAAAAACAAGAGAAGGTTGCACAATGGGTAAAGATGAAAAGAAACATTTACGCCGAAAGAAATGTTTTGAAGTATGTGAACCATGCGattttaaaatttccaaacaaaGATCTTGTGAACATGCATATAAAATTGAATGTAAGACTGATGTGGAACCAATAATTTGTGAAAAACCGTGCACAAAACAATTGCCATGTGGACATAAATGCGTAGAAGCATCATTCCCATTCGACGAAAATTATGTCAGCAACAAGATCTGTTTAGAATGTTGCATTAATCTGGTAGAGTTATACAATTTTCGTGAAAATATTTGCATTTGGTTTGAAATTGACGATAACACACAGAACAGAAAATGTTGTTTGTGTATTCAATCAGAAGATTCCATGAAATGTGTCTTCATCAAGGATGATTCGTTGAAAATTTTCGAGCTTCTAACGGATATTTGTTCCAGTGATTTAAACATCAATTATTCGGATAAAATTTGTTTAGAATGCTATCAGGGCTTGATTAAGAACTATTCATTTCATTTAACGTGCCAGAAAGCGGTACATTTTTGGACTGCTCGAATACTGCATATTTCGaatgatttaaagatatgTGAAAGGCAGAAAGTACAGACAAAAGAAATTTCCGgtacatttttattcaaatgcACATTCTGTTCCAAAGGGTTCAAAAGAAAAGATGTATTTAAGAACCACTATCGAATGCATACTGGCGAAAAGCcatttaaatgcaaattatGTACGAAATCATTTACACTGAACTCAACATTAAAACAACATATGGTGACCCATTCTGTTACGAGACCATTCGAATGTGAGATTTGCTTAAAAAGGTTCAAGAATAAAGTCAAGTTAAAGAGACACCACGATGTTCATGCAACCGATAGACGGTTTATGTGTGAAATATGTTCCAAGTCATTCTTTAGAAAAGATAGACTGAATGAACATTTAAAAACCCACTCAACTGAACGACTATTCCATTGCGAACTATGCACAAAAAGCTTCAAATTGCACTCAAATTTGAGGCAACATGTGGCAACGCACACTGAAGAAAGACCGTTCACTTGTGCAATGTGTTCAAAAGCGTTCAAAAATTACATCGCTCTAAAAAACCATTTGGAGACGCATTCAGGGGAGAAGACATTTATGTGTGAGATATGTTCCAAGTTATTCCGAAGAAGTGATATCTTGAAGCAGCATTTAAGGACACATACAGGCGAAAAGCCGTACACGTGTGACGTGTGTTCAAAAACATTCACATTGAACTCCAGTTTAAAACAGCATTTAGAGACACACAGTGACGAAAGGCCGTTTAAATGTGAAATATGTTCAAAAGCATTCAAAAACGCGTCGAAATTGAAAAGACATTTAGAGATACATAGAGATCAGAAATCGTTTATGTGTGAAATATGTTCGCGGCTGTTTAGAAGAAGAGACAGATTGAAAGAGCATTTACGAACTCATAGTGGTGAAAAGTTATATAAATGTGAAGTGTGTTCGAAGAGGTTTGCCAGTTCCAGTAATTTAGCAAGACATTCGACAATGCACACTGGACTGAAACCGCATAAATGTGAAATTTGTTTACGAACGTTCGCCCAGGCCATCCATTTAAggaaacattttaaaatacataCTGGTGAGAAACCTTTTAAATGTGAACTATGTGCCAAATTGTTTAGCCGTAAAGATAAGTTAAAAGAACATATGCGAACACATACAGGTGAAAAGCCGTATGAATGTGATTTATGTTCGGAGAGTTTCACTTATGGGAGCTATTTGAAAAGACATTTACAAGTACATCATGGTAATTTTGAAATAGCTCAGTATGGACTTTCAAGTCAGAGTATGGAAAGTCAGTGa
Protein Sequence: MCHILDREHKNDRCLKPCLKKLCPNPEHLCKKNCYEVCGPCTYPKQCRLDCDHEVTMACSDDPKKFFCYVQVETTLLCGHKTIKKRHEDINKMRCKVACSFQIKRCGHACEMTCHVNEDPDHISVNSIKECTKTREGCTMGKDEKKHLRRKKCFEVCEPCDFKISKQRSCEHAYKIECKTDVEPIICEKPCTKQLPCGHKCVEASFPFDENYVSNKICLECCINLVELYNFRENICIWFEIDDNTQNRKCCLCIQSEDSMKCVFIKDDSLKIFELLTDICSSDLNINYSDKICLECYQGLIKNYSFHLTCQKAVHFWTARILHISNDLKICERQKVQTKEISGTFLFKCTFCSKGFKRKDVFKNHYRMHTGEKPFKCKLCTKSFTLNSTLKQHMVTHSVTRPFECEICLKRFKNKVKLKRHHDVHATDRRFMCEICSKSFFRKDRLNEHLKTHSTERLFHCELCTKSFKLHSNLRQHVATHTEERPFTCAMCSKAFKNYIALKNHLETHSGEKTFMCEICSKLFRRSDILKQHLRTHTGEKPYTCDVCSKTFTLNSSLKQHLETHSDERPFKCEICSKAFKNASKLKRHLEIHRDQKSFMCEICSRLFRRRDRLKEHLRTHSGEKLYKCEVCSKRFASSSNLARHSTMHTGLKPHKCEICLRTFAQAIHLRKHFKIHTGEKPFKCELCAKLFSRKDKLKEHMRTHTGEKPYECDLCSESFTYGSYLKRHLQVHHGNFEIAQYGLSSQSMESQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01345357;
90% Identity: iTF_01345357;
80% Identity: iTF_01345357;