Suni017026.1
Basic Information
- Insect
- Silvanus unidentatus
- Gene Symbol
- Hr39
- Assembly
- GCA_963930825.1
- Location
- OZ005762.1:13498834-13504775[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3 2.1e+04 -11.5 15.2 59 150 124 226 13 277 0.50 2 5 0.58 4e+03 -2.9 4.4 45 113 211 283 182 330 0.58 3 5 5.4e-08 0.00037 20.2 0.0 1 21 400 420 400 427 0.89 4 5 0.013 92 2.4 0.0 54 118 427 490 420 506 0.62 5 5 4e-73 2.7e-69 234.7 0.1 205 408 532 730 512 730 0.96
Sequence Information
- Coding Sequence
- ATGGCGGCCGATATGCGGTCCCCAAACGTGTCAGTTACACCGATTAATATCGAACCGTACCCGCCGCCTCTATTGACAAACGGCAATAGTAATTCGACCACAATGACAACTGAACAACCGCAACGAGCACGAAGTGCACCGCATCCGGTCATCACGAATGGCAGCCAATCGGTGGAGATGTTGGATAGTTCGGATGCCGAAGTGGCACAAATCGATTTTCAATCGGTTAATATGCGATCGAAGAAAAATAAGAGGGATGATTTGCCAAGGCCGATGAGTTGGGAGGGGGAATTGTCGGATGGTGAACGGGATATGTGTGTGGATGAGACGCAAACGCAGATGCCCGAAAACCTTTCACTGCAAGGCAAACAATCCATGGCCACATCATCCACCCTAACCTCAACCACATCAAACACCGTCACCCTAGACTCGAAAGAAAGTCCAATATTACGCCTAAAACAGCCAATTGGCAACTATTCATTGCACAGTACACCATCCAATTCGCCCTTATTAAGTCAACGACATCCATTGCCAATAATCAGTCACAAGGATCTCATGCACAAGGCGCTAAACGTTCCGCCAACGCCCAGCCCCGATTCGGCCATCCATTCGGCTTACAGTGTGTTCAGTTCACCGAATCAAAGTCCATTAACACAAAGACATCTAACACTAACGCCAAATTTGAGTCGGAACAACAGTGACGCATCGCATTCGAGCTGTTGTAGTTATTCGAGTGTTTCCGTGTCCGTTTCGCCCACTCAGCAATTCTCGCCGACGCACAGTCCGATTCAAGGAAGACATATTCACAATCTGCACAGCAGTCCATTGCATCACAACGTTTTGTATCGAAATCTGCAAGAAGAGACGTCACTCCAATATGCCGGTGAACATGACATTTTAGACGAACAGGAGGACAAGAGTGGATTGATTCATACGACTTCGTTGCCCGCCCAGCCGGGCATTTCTCGGCAGCAATTGATCAATAGTCCATGTCCGATTTGTGGTGATAAAATCAGTGGATTCCATTATGGGATTTTCAGTTGTGAATCGTGCAAAGGTTTCTTTAAACGTACAGTACAAAACAGGAAGAATTATGTATGTTTGAGGGGGGCACAGTGTCCGGTTACGGTGGCGACAAGGAAAAAGTGTCCTGCTTGTCGATTTGAGAAGTGTTTGCAATGTGGAATGAAGTTGGAAGCGATTCGAGAGGATCGCACCAGAGGCGGTCGATCAACGTACCAATGTTCGTATTCCTTGCCACCATCGCTTGCCAATCATCCCGATTTGCGATCAAGTACAACCGATCTACGACAATCGGTCGGTGAAACGCATCATGGCTTAACAGTGAAATTGGAACCGTCCGATACACCGAGCATTTCGCATCATAAGCGGAATATGTTGCCAGGCTCTAAAGGTGTCCCGCCGTTATTGCAAGAAATAATGGACGTGGAGCACTTGTGGCACTACAACGAAATGGAACTGAACAAACTGAGTACGGACGGTTATTTGGGCAAAGAGGGGTCCAGTGGGGCAGTGCACAATTTATCCACACATCCTTTATTGGCTGGCACCGCACTGGCCGGTACAACAGATACAAATCCCGATTTCGTCGCGAATTTGTGCAATATTGCCGATCATCGACTGTACAAAATTGTGAAATGGTGCAAGAGTTTGCCGTTGTTCAAAAACATATCGATTGACGATCAAATCTGTCTTCTAATCAATTCGTGGTGtgaattgttgttgttctCGTGTTGTTTTCGTTCAATGACAACGCCGGGCGAGATTCGCATCTCACTtggtaaatgtataaatttaagtCAAGCACGTGACCTTGGCATGCATGGCTGTATTGAAAGGATGCTGAATTTCACCGAACAATTGAGACGTTTACGTGTCGATCAGTACGAGTATGTGGCGATGAAAGTGATTGTACTTTTGACTTCAGATACGTCCGAACTGAAAGAAGCGGAAAAAGTGCGCGCTTCACAGGAGAAAGCACTGAAAGCGTTACAGGATTATACGTTGCAACATTATCCCGAATCGCCAGCGAAATTCGGGGAATTGTTGTTGAGAATACCGGAATTACAGCGTGCTTGCCAAGTTGGCAAAGAAATGTTGACAATAAAATCAAAAGATGGCGACGGACCTAGTTTTAATCTCCTAATGGAACTACTACGTGGGGACCACTAG
- Protein Sequence
- MAADMRSPNVSVTPINIEPYPPPLLTNGNSNSTTMTTEQPQRARSAPHPVITNGSQSVEMLDSSDAEVAQIDFQSVNMRSKKNKRDDLPRPMSWEGELSDGERDMCVDETQTQMPENLSLQGKQSMATSSTLTSTTSNTVTLDSKESPILRLKQPIGNYSLHSTPSNSPLLSQRHPLPIISHKDLMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHLTLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHIHNLHSSPLHHNVLYRNLQEETSLQYAGEHDILDEQEDKSGLIHTTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAQCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLANHPDLRSSTTDLRQSVGETHHGLTVKLEPSDTPSISHHKRNMLPGSKGVPPLLQEIMDVEHLWHYNEMELNKLSTDGYLGKEGSSGAVHNLSTHPLLAGTALAGTTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMTTPGEIRISLGKCINLSQARDLGMHGCIERMLNFTEQLRRLRVDQYEYVAMKVIVLLTSDTSELKEAEKVRASQEKALKALQDYTLQHYPESPAKFGELLLRIPELQRACQVGKEMLTIKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_01345065;
- 80% Identity
- iTF_01345065;