Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963930825.1
Location
OZ005763.1:4681823-4687165[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.9e-24 1.5e-20 73.5 0.0 2 89 116 199 115 199 0.95
2 2 0.2 5e+02 1.4 0.0 32 67 1241 1277 1227 1295 0.77

Sequence Information

Coding Sequence
ATGACTACGAAAGTGGAAAGAATTGGTAATGGACAGAAAAACAGTCCCGGTAGCTCAAAATCATCACCAACATGTGGAAAATACTACGAAAATCATTATACATTTAAAGATGACTTGTTCGAATTCGAAGTACCACCCGAAGCCCCCGTTTTCTATCCAACAGATGAAGAATTTGAAGACCCATTGGGGTACATAGCAAAAATTCGTCCTCTTGCTGAAAATACGGgcatatgtaaaataaaaccaCCAACAAATTGGCAACCGCCCTTTGCTGTTGATGTTGATAAATTACGGTTCACGCCCCGAATACAAAGACTAAATGAACTCGAAGCAAAGACACGTGTTAAACTCAACTTTCTTGATCAAATTGCGAAATTCTGGGAGCTTCAAGGCTCATCCCTAAAGATTCCAATGGTTGAGAAGCGAGCATTAGACTTGTATACTCTTCACAGTGTTGTGCAATCGGAAGGCGGTTTTGATACGGCAACAAAGGACAGAAAATGGGCGAAAATATCCATACGTATGGGATATCCGGCTGGTAAAAGTATTGGTACCATACTGAAGACGCATTATGAACGTCTCTTATTTCCCTTCGATGTTTTCAAACAAGGCAAACAATTAAACATTAAAATTGAACATAACGATGATGCAGAGAAAACTGATAAAGACTACAAACCCCACGGTATTGTTGGACGTATGGCCATTAAACCACCACCGGAGAAGAATGCAAGACGTTCGAAACGTTTTGAAAACGATGATAGCAAGACTGAGaatTTAGCTGTTAAGGTAAAAGATGAGAAATTAGAAGATTGTGATGAAGTAGATAATAAGGAATTGAAACGTTTGCAATTTTATGGTGCCGGACCAAAAATGGCTGGTTTCAGTAAGAAACGAGACGATAAAAAGACAAGCAACTTTGAATTTGACCCGTTGGCAAAGTATGTTTGTCATAATTGCAATCGTGGCGATGCTGAAGAATACATGTTGCTCTGTGATGGATGTGATGACAGTTATCACACATTTTGTTTAATGCCACCATTGGCGGAAATACCGAAAGGTGACTGGCGGTGCCCGAAGTGCGTTGCTGAAGAAGTGTCCAAGCCAATGGAGGCTTTCGGCTTTGAACAGGCACAAAGAGAGTATACTTTACAGCAGTTTGGAGAGATGGCTGATCAGTTCAAGTCGGAATACTTTAATATGCCTGTTCATATGGTACCGACTAGTACGGTTGAGAAGGAATTCTGGCGAATTGTGTCATCGATCGATGAGGATGTAACTGTTGAATACGGTGCCGATCTACATACAATGGACCACGGTTCTGGTTTTCCcacaaaaacgtctattaacCTCTTCCCCGGCGACAAGGAATACGCTGATTCAAGTTggaatttaaacaatttaccGGTTTTAGAGGGATCAGTATTGGGTTATATAAATGCGGATATTTCCGGTATGAAAGTACCTTGGATGTATGTGGGCATGTGTTTTGCGACATTCTGTTGGCACAATGAGGATCATTGGAGTTATTCGATCAATTATTTGCATTGGGGTGAGGCGAAGACGTGGTACGGTGTGCCGGGCAGTAAAGCGGAAGCATTTGAAGAGACAATGAAGTCAGCAGCACCGGAATTGTTCCAATCGCAACCGGATCTTTTACATCAATTGGTCACAATTATGAATCCGAACATATTGATGAATGCCGGCGTGCCGGTTTATCGTACCGATCAACATGCCGGTGAATTTGTTGTCACATTTCCACGTGCTTATCATGCTGGCTTTAATCAAGGATACAATTTTGCGGAAGCTGTCAATTTTGCACCGGCCGATTGGCTCCGTATGGGCCGTGAATGTATATTGCATTATTCGCATTTAAGACGTTTCTGCGTATTTTCACATGATGAATTGGTGTGTAAGATGGCATTGGATCCGGAAAAACTTGATTTAACTATTGCAGCAGCAACTTATCAAGATATGATCCAAATGGTTGACACGGAGAAGAAACTGAGGAAAAATTTGTTAGATTGGGGTGTAACAAGTGCTGAACGAGAAGCATTTGAATTACTACCAGATGATGAGCGACAGTGTGAAGTATGTAAAACAACGTGCTTTTTATCGGCAGTAACGTGCAGTTGCACTAGTGAAGTTCTTGTTTGTTTGCGTCATTATAAGAGTCTTTGCGAATGTCCACCGAAAAGTCACACATTACGATATCGTTACACGTTGGATGAGTTGCCGGTGATGTTAAAGTCGTTGAAATTGAAAGCGGAATCGTTTGATCATTGGGTGAATCGTGTTAAAGATGCATTGGATCCAAATACACCGAAAACGATGAACTTGAACGATTTGAAAGCGTTGTTAAATGAAGCTGATGGCAAAAAATTCCCGAAATCGGATTTATTACAAACATTAACAACAGCTGTTGAAGATGCTGAGAAATGTTCCAGTGTTATACAACAATTAGATTTGAATAAAATCAGAACACGAACTAGAAATTCAGCGGACACAAAATATAAGTTAACTGTTGAGGAATTGACATTGTTTTGTGAAGAAATTGACAGTTTAGCATGTATATTGGACGAAGCGAAAAGTATTCGTGATTTATTGGAACAGACAAAGAAATTCGAAACGGAAAGTGAACGTTTGTTGGCTTTACCATTAGCTGAATGTCCATTGCAAGAAGTGAAAAGTTGCATTGCACATGGCAATGGTTTGTGTATTGAATTACCGaatttgaaaagaatttgtAATAGAGAGAAACAAGTTGAATGGTTCCGGGATGTAGTTGCTTATAAAAAGAAAACCGATTATCTTAGTTTAGAGTCTATAAAGAGTTTAATACAGCAAGGTTTAGAATTAGTACCGCACGTTGATATGGAAGCTGAATTAAGTCAGTTGCAATTTATATTAGAACAGAGTGAAGAATGGGAGCAAAAAGTCGGATGGATATTAGAATCGAAAGATAGCACTGTCCTTATACAAGTAGATAAATTACTTAAGGAAGCTTCAAAGATAAAATGTTATCTACCATCAGAGGGACATTTGTATGATTCTATGAAAAAGGCTAGAGATTGGTTGAGATTATTAGAAGAGATGAATTCGGCTGAATATTATCCGTATTTCAATGCAATGgaagatttaattaaaaaaggaCGTGCATTGTCTTTGCATTTAGTAGAAGTTGATAGAATGAATGATTATTTAGTGTTAGCAACCAATTGGAAAGAGAAAACATGTAAAGTATTTTTACGTAAAAATTCTGCAGTTAATTTAATGGAAGCATTATCACCTCGTATTCATTTCCCAGCGAATGCTGGTAAATTAAAGGCAAAGAAAACGGACGATGAACCGAGTGTGATTTGTTTAACGAATACAATGGATcctgttgctgttgttgcaCTGTTTAAAGATGCAGAAGACACTGAAATGGATATGATAAAAGTGTTACGTTCGATAAACAAAGAGAAAAGTTTAGATCCAAATGATGGTAAgacattttgtatatgcaacAAACCGTTACATGGTGTTATGATGCAATGTGAATTATGCAAAGATTGGTTCCATTCAAATTGTGTACAATTACCAAAAATATCTACAACCAAGTACAAAGGAAACTTAACCAGTGTCTCTTTACATTTAGGCTTTAAagattgtaaatatttatgtcCAAATTGTTTAAGAACTAAACGTCCGCGTTTAGATGTAATATTAAGTTTATTAATGTCATTGCAAAAATTATATGTACGTGTACCAGAAGGGGAAGCGTTACAGTGTTTAACAGAACGTGCAATGAATTGGCAAGATAGGGCTAGACAATTGTTGCAACAGCCCGAATTGGAAGCAGCCAAAATTAAATTAAGTCTATTCACACAAAAATATATGCAAGTTGCTTCaaagcaacaacaacaattacgTTTAGAGAAAAATACATCACGACCAGCAACAAATAATAAGGATACAGATGTTGAGATGAGTAGACAGTTTGAGGGTGAAAATGCGAATATGGAAAAAGTTGAAGAGAGTAAGGCTGATGAGCCGTCAACTGAGACAAACTCAATAACACCATCATCACCAACAGACGAATTAAATAGTAATGATGAACAGATGATGGGTGAACATGCGTATTCTTTACATTTGCCAAAAGTTGACACAAATGAGTTTATATTGAAATTGAATCCAGAGATACGTAAACAGATGGAGGACTTATTAATGGAGGGTGATTTGTTGGAAGTACACTTAGATGAGACTTTCTGTTTGTGGAAGTTGTTCCAAGCGTCTAGAGATCCGGAGAAGGAACCGATTCTTCTGGATTTCGATGCAATGTTGAAGGGTACACCGAAGAAACGTGGCCGTAAACGCATGTCTGAAGATAGTAATGACTCATTGAAGAAAGTTGTAAAAAGTATTAAACCAGAAGTGGTGGAGAAGAAAGTCCGTAGAAAGACTGGTACCAAAGATAGTGGCATGAAACGACGCACGAAACGTAGAGGACGACATCGTCAGACAGTCGATGTGAATGATGGCACAGAGAACGACGCGGATGACGATGAGGGCGATGATGACGATGAAGAGGAGGAGAGTTGTGCGGCAAGTGGATGTTTGAAGCCGTCTGGACAGAATGTTGATTGGGTGCAGTGCGATGGCGGTTGTGAGCAATGGTTCCATATGGCTTGTGTAGGCTTGTCAGCTGAAGATATAAATGAAGATGAAGATTATATTTGTATGACATGTTCGAAGAATACAACATTTGagaatttaaattcaaatgaTAGTGTTGCAAATAGTCCACGTTCACCTGATTCTACACAGCCTTCCACATCTAAAGAAAgtctataa
Protein Sequence
MTTKVERIGNGQKNSPGSSKSSPTCGKYYENHYTFKDDLFEFEVPPEAPVFYPTDEEFEDPLGYIAKIRPLAENTGICKIKPPTNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHSVVQSEGGFDTATKDRKWAKISIRMGYPAGKSIGTILKTHYERLLFPFDVFKQGKQLNIKIEHNDDAEKTDKDYKPHGIVGRMAIKPPPEKNARRSKRFENDDSKTENLAVKVKDEKLEDCDEVDNKELKRLQFYGAGPKMAGFSKKRDDKKTSNFEFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLAEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTSTVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSINLFPGDKEYADSSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAEAFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSHLRRFCVFSHDELVCKMALDPEKLDLTIAAATYQDMIQMVDTEKKLRKNLLDWGVTSAEREAFELLPDDERQCEVCKTTCFLSAVTCSCTSEVLVCLRHYKSLCECPPKSHTLRYRYTLDELPVMLKSLKLKAESFDHWVNRVKDALDPNTPKTMNLNDLKALLNEADGKKFPKSDLLQTLTTAVEDAEKCSSVIQQLDLNKIRTRTRNSADTKYKLTVEELTLFCEEIDSLACILDEAKSIRDLLEQTKKFETESERLLALPLAECPLQEVKSCIAHGNGLCIELPNLKRICNREKQVEWFRDVVAYKKKTDYLSLESIKSLIQQGLELVPHVDMEAELSQLQFILEQSEEWEQKVGWILESKDSTVLIQVDKLLKEASKIKCYLPSEGHLYDSMKKARDWLRLLEEMNSAEYYPYFNAMEDLIKKGRALSLHLVEVDRMNDYLVLATNWKEKTCKVFLRKNSAVNLMEALSPRIHFPANAGKLKAKKTDDEPSVICLTNTMDPVAVVALFKDAEDTEMDMIKVLRSINKEKSLDPNDGKTFCICNKPLHGVMMQCELCKDWFHSNCVQLPKISTTKYKGNLTSVSLHLGFKDCKYLCPNCLRTKRPRLDVILSLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQQPELEAAKIKLSLFTQKYMQVASKQQQQLRLEKNTSRPATNNKDTDVEMSRQFEGENANMEKVEESKADEPSTETNSITPSSPTDELNSNDEQMMGEHAYSLHLPKVDTNEFILKLNPEIRKQMEDLLMEGDLLEVHLDETFCLWKLFQASRDPEKEPILLDFDAMLKGTPKKRGRKRMSEDSNDSLKKVVKSIKPEVVEKKVRRKTGTKDSGMKRRTKRRGRHRQTVDVNDGTENDADDDEGDDDDEEEESCAASGCLKPSGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICMTCSKNTTFENLNSNDSVANSPRSPDSTQPSTSKESL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01121361;
90% Identity
-
80% Identity
-