Basic Information

Insect: Sialis lutaria
Gene Symbol: -
Assembly: GCA_949319165.1
Location: OX439236.1:21353093-21357019[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.56 30 5.6 0.1 2 23 6 27 5 27 0.96

2 15 8.7 4.7e+02 1.8 1.0 1 20 695 714 695 716 0.81

3 15 0.96 52 4.8 1.6 2 23 757 779 756 779 0.95

4 15 0.0013 0.071 13.8 1.1 1 23 787 809 787 809 0.98

5 15 1.3e-05 0.00072 20.1 3.1 2 23 812 833 811 833 0.97

6 15 0.066 3.6 8.5 2.1 1 23 839 861 839 861 0.98

7 15 1.2e-05 0.00068 20.2 6.3 2 23 868 889 867 890 0.95

8 15 3.6 1.9e+02 3.0 3.4 5 23 903 921 902 921 0.94

9 15 0.00046 0.025 15.3 1.5 3 23 928 949 927 949 0.97

10 15 0.00011 0.0059 17.2 0.2 2 23 965 985 964 985 0.97

11 15 9.4e-05 0.0051 17.4 1.1 1 20 991 1010 991 1013 0.92

12 15 0.00018 0.0096 16.6 0.4 1 23 1021 1043 1021 1043 0.99

13 15 0.0061 0.33 11.7 7.2 1 23 1049 1071 1049 1071 0.97

14 15 2.5e-06 0.00013 22.4 3.3 1 23 1077 1099 1077 1099 0.99

15 15 0.00075 0.04 14.6 6.4 1 23 1105 1127 1105 1128 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.56	30	5.6	0.1	2	23	6	27	5	27	0.96
2	15	8.7	4.7e+02	1.8	1.0	1	20	695	714	695	716	0.81
3	15	0.96	52	4.8	1.6	2	23	757	779	756	779	0.95
4	15	0.0013	0.071	13.8	1.1	1	23	787	809	787	809	0.98
5	15	1.3e-05	0.00072	20.1	3.1	2	23	812	833	811	833	0.97
6	15	0.066	3.6	8.5	2.1	1	23	839	861	839	861	0.98
7	15	1.2e-05	0.00068	20.2	6.3	2	23	868	889	867	890	0.95
8	15	3.6	1.9e+02	3.0	3.4	5	23	903	921	902	921	0.94
9	15	0.00046	0.025	15.3	1.5	3	23	928	949	927	949	0.97
10	15	0.00011	0.0059	17.2	0.2	2	23	965	985	964	985	0.97
11	15	9.4e-05	0.0051	17.4	1.1	1	20	991	1010	991	1013	0.92
12	15	0.00018	0.0096	16.6	0.4	1	23	1021	1043	1021	1043	0.99
13	15	0.0061	0.33	11.7	7.2	1	23	1049	1071	1049	1071	0.97
14	15	2.5e-06	0.00013	22.4	3.3	1	23	1077	1099	1077	1099	0.99
15	15	0.00075	0.04	14.6	6.4	1	23	1105	1127	1105	1128	0.96

Sequence Information

Coding Sequence: ATGGATCTGAATATATCATGCCCAGTGTGTACACTATATTTAAGGTCaggtatttctttacaacaacATCTTTACACACATCCAAAAGAACAAGTTATTGAAGCATTAGTATCAATAAGTAATCAAAAAGCAGGAAATGTTGTTGATACTAGGCGAATTCAATCGGATATAACTGTAAGCAGTTCTTTTTCACATGCACCATGGAATCAAAATCGAGTCGTTGTTACAAATTCACCCGTTGTTTTACCGGTTTCAAACAACCAATCAGTTATTTATCAACAGATTACAAGCACTGGGACAAATTTACCGATGAATTCTCTGGTTCCTCAATATATAGTTACACCAACGATAAATCAACAGATGTTGATGAATCCGTATTTGTACCAACAACAGCTACAAATCTTAACTGGACCTGTTTCAACATTAAACAGAACAATTCAAACCCCAACTACTATCGCTCCAGTTAATAAACAGACAACCATGACTTATTGTAACATTGCTCCTGCACCAGATAGAAATCAACCTATAAATCTATCAACAGTCAgtgaaataaaatgtatagaaaACAAAAACGAAGAAGATGATACACTGATTATTTCTGAATTAGATAAATCTCTTGACACGTACGATGATACTGAAAGACATAAAGATGTAgacagtttaaaaataaatgaatttaaaatacaaaataaagaaGTAGATAACGAAAGAGATGTAGAACATTTAACAAACGATAGTATAGAAGAAAGAAAACAAAATGTAGAAACTCATGTAATAGAAAGAAGAAAATGTACAGAAATAGAAACAGAAAACTTAACAATAAACAATtttgatatcttaaaaaaacaaaGGATAGGTGATTGTGTAATCGAAAGAAGGCTATCAAGTCCAGAAAATTTAATGTCTGATGTTGGGAATGAAGTAGACACAAACAATGAAGTAGAAAAtttaagtattaataaatataaccaAAGCACATTTTCTGAGTCATTGTTACCTGAAATAGAAATAATTGAAGGTGACAAAAATATGTCTCAGTATCCAAAAGCGGACGATTCATCTGATATTACTGTAGTCAATACTTCGATTAAATCTATTTCAACTCATACAAACAATTCAAGAGAAACCTATGATGAAGAAGAAGCTGAGCTTATTGTTCCTGATAACGAAACTCTTCATAGCatacaaaaaattcatattgtaaCAAACGATGATAATGAACCGAAGGATTTTTGCATAAATGAAAGAAATTATGATACAAACGGACACAATTACTCTAATTCAAATAGCAATGAAACAACTACGAGAGAAAGCAGTTACAACAATCAACATTTACACGAACTTTATGACATAGATGAAAAGGAATCAATTCTTCCggatataatttttaaagatactttaaaaaatgaacCGAAAGAATGCATTAACAATGAAAGATTTGACATTAAATCAGATATTATTGTTTTACAAGATGAAGTAATTTGCCTACCTAATTATACCAGTAACAACATTGTTACTAATGAAATAAATGAGATGGAATCAGAAAATAAGATAgacataaaaaatgaaatctGTGAACAACTAATATCAAATCAAACTATAATCAGCGGAAAATATTTGCATATTGAGATTGATAATGTTTCTGAAGAGGTCGAATTCAACGGCATGAAGTTAGTGGTTCCTGGTGATTTAACAAGCACACCACTCAAAAGAAACTATGATTGTGTAGAAGAGGAAAGAGAGAACCCACCTGTTCTATTAGATATTGGAGAGATGCGAAAAGAACAACATGAAGAtgaaaacaaagaaaatgtaaataaaaatgaaatagatATTGGCGCCGAAGAGTCAATTTTTATAAGGGAGGAATTATCTGGAGGTGAAGGGAATGGTGCAAGTAACAGTGGCTGGGGAAagaattgTCAAGAGAGTAGTTCGGGTGTATCGACATCATATGATTTAATAGCACGTGAGTCATGGGAAGCATCAGATTGCTCAGACACGGAAGTACCACCATTACAAAGTCGAATACCTCTAAATGATTCTTCAATGTTCAAACCTAAACAAAAATCTTCTCGTCAGTATACTTGTTCATCTTGCAATGCTTCGTTTCCATGCCCTAAAGAACGCCGAGTGCATTTATCAAAATGTCGTGAATCGTCTTCGGTGATAACATCGCTTAAGAAAGAAGAAATCGATATGGACGATGATCAAGAAATTAATGATGGAGGATTCGAAAATGCAATTCAAAATGATGAAAGTCATTTAAAATGTCAAGCTTGTAATCTAGTTTTTCTTACAGTAAAGCAATTAACAGTACATCACCGAAATACACACAAGGGTAAAATTATTCCAAAGTTTACATGTTCTGTCtgtaatgaaaatttcaaattagaaTCAAAATATACTGAACATTTAAAAGTACATCCTCTTGAATGTTCCATATGTGGTAAATGTTTCTTCAGAAGACAAAATTTGTCAATACATTTAAAAAGGCATTCAGGAATAAAACCGTTTAAATGTGAAACATGTATGAAATCGTTCCTCACGAAACAAAAAATGAACGAACACATGAATGTACACACCGGCCGTGCTCCACTAAAATGTAATCTATGCGATGAGACTTTTAAACGACACTCAAATCTGACACAACATAGAAATACACATCACTATCATGTGAGGAAGAAGCTGAAGGAATTTGCGTGCCACTGCGGGGAAGTGTTTCATTCTAAAAAGAAATTCTTATGGCATTCAGAGATACATGAGTCAAAACCGAAAGCGTGTGGATTTTGTAGTGAGAAATTTGTACATACGGCTAGTTTGACGCGTCACATGCGCAAAGCGCACAACAATTACTATATTCCTGATGAGAAGCGCAAGGTAGAAAATGTAGAATGTCCTGTATGCAAAAAGGTATATCTGAAAAGTTCTTTGGAAATTCACATGCGTACACACGATGGTGTAAAAGCATTCTCATGCAACATTTGCAGTAAAGAGTTTTCAACAAACTGGAATCTTAAGTTACATCGATGGACGCACGCATCTAGGTTATCAAAACCGTTCAAATGCAACTTGTGCAAGAGCGCGTTTATTCGACAAGGGGACTACGTAGCTCACATGAATTCACACAGAAGTGTTAGACCGTACACATGTAACTATTGCGGACGTCAGTTTATAAGGAAGTATAACTGTCACCGGCATGTAAAGGAACATGAAGGGAATAAGTCTTTTAAATGCTCAATTTGCGGAAAGGAATTTCATAGGTCGTATTATTTAAAAGAACATTTGAGAATTCATAGCGGGCTCAGGCCTTATACTTGTCATATTTGCGGGAAGACTTCAGCGACAAAATCAAACCATAATAAACACGTTCGAATACATCATGCAAGAGAACCCGTTAGTACCGAAggttga
Protein Sequence: MDLNISCPVCTLYLRSGISLQQHLYTHPKEQVIEALVSISNQKAGNVVDTRRIQSDITVSSSFSHAPWNQNRVVVTNSPVVLPVSNNQSVIYQQITSTGTNLPMNSLVPQYIVTPTINQQMLMNPYLYQQQLQILTGPVSTLNRTIQTPTTIAPVNKQTTMTYCNIAPAPDRNQPINLSTVSEIKCIENKNEEDDTLIISELDKSLDTYDDTERHKDVDSLKINEFKIQNKEVDNERDVEHLTNDSIEERKQNVETHVIERRKCTEIETENLTINNFDILKKQRIGDCVIERRLSSPENLMSDVGNEVDTNNEVENLSINKYNQSTFSESLLPEIEIIEGDKNMSQYPKADDSSDITVVNTSIKSISTHTNNSRETYDEEEAELIVPDNETLHSIQKIHIVTNDDNEPKDFCINERNYDTNGHNYSNSNSNETTTRESSYNNQHLHELYDIDEKESILPDIIFKDTLKNEPKECINNERFDIKSDIIVLQDEVICLPNYTSNNIVTNEINEMESENKIDIKNEICEQLISNQTIISGKYLHIEIDNVSEEVEFNGMKLVVPGDLTSTPLKRNYDCVEEERENPPVLLDIGEMRKEQHEDENKENVNKNEIDIGAEESIFIREELSGGEGNGASNSGWGKNCQESSSGVSTSYDLIARESWEASDCSDTEVPPLQSRIPLNDSSMFKPKQKSSRQYTCSSCNASFPCPKERRVHLSKCRESSSVITSLKKEEIDMDDDQEINDGGFENAIQNDESHLKCQACNLVFLTVKQLTVHHRNTHKGKIIPKFTCSVCNENFKLESKYTEHLKVHPLECSICGKCFFRRQNLSIHLKRHSGIKPFKCETCMKSFLTKQKMNEHMNVHTGRAPLKCNLCDETFKRHSNLTQHRNTHHYHVRKKLKEFACHCGEVFHSKKKFLWHSEIHESKPKACGFCSEKFVHTASLTRHMRKAHNNYYIPDEKRKVENVECPVCKKVYLKSSLEIHMRTHDGVKAFSCNICSKEFSTNWNLKLHRWTHASRLSKPFKCNLCKSAFIRQGDYVAHMNSHRSVRPYTCNYCGRQFIRKYNCHRHVKEHEGNKSFKCSICGKEFHRSYYLKEHLRIHSGLRPYTCHICGKTSATKSNHNKHVRIHHAREPVSTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01343379;
90% Identity: iTF_01343379;
80% Identity: -