Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540811.1:27265499-27270054[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.44 24 5.8 0.2 2 23 6 27 5 27 0.96

2 15 8.2 4.4e+02 1.8 1.0 1 20 691 710 691 712 0.81

3 15 0.55 30 5.5 1.5 2 23 753 775 752 775 0.95

4 15 0.025 1.3 9.7 1.0 1 23 783 805 783 805 0.98

5 15 1.2e-05 0.00067 20.1 3.1 2 23 808 829 807 829 0.97

6 15 0.061 3.3 8.5 2.1 1 23 835 857 835 857 0.98

7 15 1.2e-05 0.00063 20.2 6.3 2 23 864 885 863 886 0.95

8 15 3.3 1.8e+02 3.0 3.4 5 23 899 917 898 917 0.94

9 15 0.00043 0.023 15.3 1.5 3 23 924 945 923 945 0.97

10 15 0.0001 0.0054 17.2 0.2 2 23 961 981 960 981 0.97

11 15 8.7e-05 0.0047 17.4 1.1 1 20 987 1006 987 1009 0.92

12 15 0.00011 0.0061 17.1 0.4 1 23 1017 1039 1017 1039 0.99

13 15 0.0057 0.31 11.7 7.2 1 23 1045 1067 1045 1067 0.97

14 15 2.3e-06 0.00012 22.4 3.3 1 23 1073 1095 1073 1095 0.99

15 15 0.0007 0.038 14.6 6.4 1 23 1101 1123 1101 1124 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.44	24	5.8	0.2	2	23	6	27	5	27	0.96
2	15	8.2	4.4e+02	1.8	1.0	1	20	691	710	691	712	0.81
3	15	0.55	30	5.5	1.5	2	23	753	775	752	775	0.95
4	15	0.025	1.3	9.7	1.0	1	23	783	805	783	805	0.98
5	15	1.2e-05	0.00067	20.1	3.1	2	23	808	829	807	829	0.97
6	15	0.061	3.3	8.5	2.1	1	23	835	857	835	857	0.98
7	15	1.2e-05	0.00063	20.2	6.3	2	23	864	885	863	886	0.95
8	15	3.3	1.8e+02	3.0	3.4	5	23	899	917	898	917	0.94
9	15	0.00043	0.023	15.3	1.5	3	23	924	945	923	945	0.97
10	15	0.0001	0.0054	17.2	0.2	2	23	961	981	960	981	0.97
11	15	8.7e-05	0.0047	17.4	1.1	1	20	987	1006	987	1009	0.92
12	15	0.00011	0.0061	17.1	0.4	1	23	1017	1039	1017	1039	0.99
13	15	0.0057	0.31	11.7	7.2	1	23	1045	1067	1045	1067	0.97
14	15	2.3e-06	0.00012	22.4	3.3	1	23	1073	1095	1073	1095	0.99
15	15	0.0007	0.038	14.6	6.4	1	23	1101	1123	1101	1124	0.96

Sequence Information

Coding Sequence: ATGGATCTGAATATAACATGCCCAGTGTGTACACTATATTTAAGGTCAGGTATTTCTTTACAACAACACCTTTTCACACATCCAAAAGAACAAGTTATTGAAGCACTGGTATCAATAAGTAATCAAAAATCAGGAAGTGTTGTTGATACCAGGCGAATTCAATCGGATATAACTGTAAGCAGTTCTTTTTCGCATGCACCATGGAATCAAAATCGAGTCGTTGTTACAAATTCACCCGTTGTTTTACCGGTTGCAAACAATCAGTCAGTTATTTATCAACAGATTACAAGCACTGGGACAAATTTACCGATAAATTCTCTGGTTCCTCAATATATAGTTACACCAACGATAAATCAACAGATGTTGATGAATCCGTATTTGTACCAACAACAGCTACAGATTTTATCTGGACCTGTTTCAACATTAAACAGAACAATTCAAACCCCAACTACCATCACTCCAGTTAATAAACAGACAACCATGACTTATTGTAACATTGCTCCTGCACCGGATAGAAATCAACCTATAAATCTATCAACAGTCAgtgaaataaaatgtatagaaaacaAAAACGAAGAAGCTGATACTCTGATTATATCTGAATTAGATAAATCTCTTGACACATACGATGATATTGAAAGACATAAAGATGTAGACAGTTTAAAAATAAGtgaattacaaaataaacaaatagatAACGAAAGAGATATAGAACATATAACAAACGATAGTATTGATGAAAGAAAACAAAATGTAGAAACTCATGTAATAGAAAGAAGAAAATGTACAGAAACAGAAAACTTAGcaataaataactttaatatCTTAAAGAAACAAAGGATAGGTGATTGTGTAATCGAAAGAAGGCTGTCAAATCCAGAAAATTTAATGTCCGATGTCAGGAATGAAATAGATACAAACAATGAAGTAGAAAAtttaagtattaataaatataaccaaAGCACATTTTCTGAGGCATTGTTACCTGAAATAGAAATAATTGAAGGTGACAAAAATATATCTCAGTATCCAAAAACGGATGATTCATTTGATATTACTGTAGTCAATACTTCGATTAAATCTATTTCAACTCATGCAAACAATTCAAGAGAAAATTATGATGAAGAAGAAGCTGAGCTTATTGTTCCTGATAACGAAACTCTTCATAGCatacaaaatattcatatagtAACAAATGATAATAATGAATTGAAAGATTGTAgcgtaaatgaaaaaaattatgacacaaacacacacaacTACTCTAATTTGAATAGCAATGAACCAACTACGAGAGAAAGTAGTTACAACAATCAAAATTTACATGAAATTTATGACATAGATGAAAAAGAATCGATTCTTCCAGACATAATTTTGAAAGATCCTTTAAAAAGTGAACCGAAAGAAAGCTTCAACAATGAAAGATTTGATATAAAATCAGATATTATTGTTTTACAAGATGAAGTAATTTGCCTACCTAATTATACCAGTAACAACATTGTTTCTAATGAAATAAATGATACGGAATCAGAAAataagataaacataaaaaatgaaatctgtgaacaaattttatcaaatcAAACTATAGTCAGtggaaaatatttacatattgagATTGATAATGTTTCTGAAGAGGTCGAATTCAACGGCATGAAGTTAGTGGTTCCCGGTGATTTAACAAGCACGCCGCTCAAAAGAAACTATGATTGTGTAGAAGAGGAAAGAGAAAACCCACCTGATCTATTAGATATTGGAGAGATGCGAAAAGAACAGCATGAAGATGAAaacaaagaaaatgtaaataaaaatgaaatagacATTGACACTGAAGAGTTAATTTTTGTAAGGGGAGAATTATCTGGAGGTGAAGGCAATGGCGCAAGTAACAGTGGCTGGGGAAagaattgtCAAGAGAGTAGTTCGGGTGTATCAACATCATATGATTTAATAGCACGCGAGTCATGGGAAGCATCAGATTGCTCAGACACGGAAGTACCACCATTACAAAGTCGAATACCTCTAAATGATTCTTCAATGTTCAAACCTAAACAGAAATCTTCCCGTCAGTATACTTGTTCGTCTTGCAATGCTTCGTTTCCATGCCCTAAAGAGCGTCGAGTGCATTTATCGAAATGTCGTGAATCATCTTCGGTGATAACATCGCTTAAGAAAGAAGAAATCGAAATGGACGATGATCAAGAAATTAATGACGGAGGATTTGAAAATGCAATTCAAAGTGATGATAGTCATTTAAAATGTCAAGCTTGTAATCTAGTTTTTCTTACAGTAAAGCAATTAACAGCACATCACCGAAATACACACAAGGGTAAAATTATTCCAAAGTTTACATGTTCTGTCTGtaatgaaaatttcaaattagaattaaaatatactgAACATTTAAAAGTACATCCGCTCGAGTGTTCTATATGCGGCAAATGTTTCTTCAGAAGACAAAATTTgtcaatacatttaaaaagacATTCAGGAATAAGACCGTTTAAATGCGAAACATGTATGAAATCGTTCCTcacgaaacaaaaaatgaatgaACACATGAATGTTCACACCGGCCGTGCTCCACTGAAATGTAATCTGTGCGATGAAACTTTTAAACGACACTCGAATCTGACACAACATAGAAATACACATCACTATCATGTGAGGAAGAAGCTGAAGGAATTTGCGTGCCACTGCGGGGAAGTGTTTCATTCTAAAAAGAAATTCTTATGGCATTCAGAGATACATGAGTCAAAACCGAAAGCGTGTGGATTTTGTAGTGAGAAATTTGTACATACGGCTAGTTTGACGCGTCACATGCGCAAAGCGCACAACAATTACTATATTCCTGATGAGAAACGCAAGGTAGAAAACGTAGAATGTCCTGTATGTAAAAAGGTTTATCTGAAAAGTTCTTTGGAAATTCACATGCGTACACACGATGGTGTAAAAGCATTTTCATGCAACATTTGCAGTAAAGAGTTTTCAACAAACTGGAACTTGAAGTTACATCGATGGACACACGCATCTAGGTTATCAAAACCGTTTAAATGCAATCTGTGCAAGAGCGCGTTCATCCGACAAGGTGACTTCGTAGCTCACATGAATTCACACAGAAGTGTTAGACCGTACACGTGTAACTATTGCGGTCGTCAGTTTATAAGGAAGTATAATTGTCATCGGCATGTGAAGGAACACGAAGGGAATAAGTCTTTTAAATGCTCAATTTGCGGAAAGGAATTTCATAGGTCGTATTATTTAAAAGAACATTTGCGAATTCATAGCGGGCTCAGGCCTTACACTTGTCATATTTGCGGGAAGACTTCAGCGACAAAATCAAACCATAATAAACATGTTCGAATACATCATGCAAGAGAACCCGTTAGTACAGAAggttga
Protein Sequence: MDLNITCPVCTLYLRSGISLQQHLFTHPKEQVIEALVSISNQKSGSVVDTRRIQSDITVSSSFSHAPWNQNRVVVTNSPVVLPVANNQSVIYQQITSTGTNLPINSLVPQYIVTPTINQQMLMNPYLYQQQLQILSGPVSTLNRTIQTPTTITPVNKQTTMTYCNIAPAPDRNQPINLSTVSEIKCIENKNEEADTLIISELDKSLDTYDDIERHKDVDSLKISELQNKQIDNERDIEHITNDSIDERKQNVETHVIERRKCTETENLAINNFNILKKQRIGDCVIERRLSNPENLMSDVRNEIDTNNEVENLSINKYNQSTFSEALLPEIEIIEGDKNISQYPKTDDSFDITVVNTSIKSISTHANNSRENYDEEEAELIVPDNETLHSIQNIHIVTNDNNELKDCSVNEKNYDTNTHNYSNLNSNEPTTRESSYNNQNLHEIYDIDEKESILPDIILKDPLKSEPKESFNNERFDIKSDIIVLQDEVICLPNYTSNNIVSNEINDTESENKINIKNEICEQILSNQTIVSGKYLHIEIDNVSEEVEFNGMKLVVPGDLTSTPLKRNYDCVEEERENPPDLLDIGEMRKEQHEDENKENVNKNEIDIDTEELIFVRGELSGGEGNGASNSGWGKNCQESSSGVSTSYDLIARESWEASDCSDTEVPPLQSRIPLNDSSMFKPKQKSSRQYTCSSCNASFPCPKERRVHLSKCRESSSVITSLKKEEIEMDDDQEINDGGFENAIQSDDSHLKCQACNLVFLTVKQLTAHHRNTHKGKIIPKFTCSVCNENFKLELKYTEHLKVHPLECSICGKCFFRRQNLSIHLKRHSGIRPFKCETCMKSFLTKQKMNEHMNVHTGRAPLKCNLCDETFKRHSNLTQHRNTHHYHVRKKLKEFACHCGEVFHSKKKFLWHSEIHESKPKACGFCSEKFVHTASLTRHMRKAHNNYYIPDEKRKVENVECPVCKKVYLKSSLEIHMRTHDGVKAFSCNICSKEFSTNWNLKLHRWTHASRLSKPFKCNLCKSAFIRQGDFVAHMNSHRSVRPYTCNYCGRQFIRKYNCHRHVKEHEGNKSFKCSICGKEFHRSYYLKEHLRIHSGLRPYTCHICGKTSATKSNHNKHVRIHHAREPVSTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01344323;
90% Identity: iTF_01344323;
80% Identity: -