Basic Information

Insect: Sialis lutaria
Gene Symbol: -
Assembly: GCA_949319165.1
Location: OX439237.1:24312117-24316562[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.7e-05 0.002 18.7 1.3 1 23 223 245 223 245 0.97

2 10 0.013 0.72 10.7 1.2 1 23 250 272 250 272 0.97

3 10 7.7e-06 0.00041 20.9 0.8 2 23 302 324 301 324 0.95

4 10 0.08 4.3 8.2 0.0 2 20 456 474 455 476 0.93

5 10 5.8e-06 0.00032 21.2 1.9 3 23 519 539 517 539 0.97

6 10 2.4e-06 0.00013 22.5 1.0 1 23 545 567 545 567 0.98

7 10 0.00023 0.013 16.2 1.6 1 19 573 591 573 596 0.91

8 10 3.2e-07 1.7e-05 25.2 1.0 1 23 602 624 602 624 0.99

9 10 0.00014 0.0075 16.9 6.8 1 23 630 652 630 652 0.99

10 10 4.1e-06 0.00022 21.7 0.1 1 23 658 680 658 680 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.7e-05	0.002	18.7	1.3	1	23	223	245	223	245	0.97
2	10	0.013	0.72	10.7	1.2	1	23	250	272	250	272	0.97
3	10	7.7e-06	0.00041	20.9	0.8	2	23	302	324	301	324	0.95
4	10	0.08	4.3	8.2	0.0	2	20	456	474	455	476	0.93
5	10	5.8e-06	0.00032	21.2	1.9	3	23	519	539	517	539	0.97
6	10	2.4e-06	0.00013	22.5	1.0	1	23	545	567	545	567	0.98
7	10	0.00023	0.013	16.2	1.6	1	19	573	591	573	596	0.91
8	10	3.2e-07	1.7e-05	25.2	1.0	1	23	602	624	602	624	0.99
9	10	0.00014	0.0075	16.9	6.8	1	23	630	652	630	652	0.99
10	10	4.1e-06	0.00022	21.7	0.1	1	23	658	680	658	680	0.98

Sequence Information

Coding Sequence: atgTCGAAGAATCATGCGATTTCAACCAGTCGTGAAATTCTTATTAACCCTATCGACGTCAACTCGCAAACTTCCTACATAGTTTTACCTCGAATCGGAGTCGATGCAAATTTATTAAGTGCTACAAACACAGGTTTGTACCTACCGAATACTACAGTTCCTGAGCAGTACCCACCGGATGAACTTCTGTCAACGCAAGACTTGACTGAAGAAGATCGCAAACTTGCAGCTGCACTCGTTGCAGTGCAATTTGTTCAACAACAAAAGCAGCAGCAACAGCACTTATTACAGGATGCAATCATACAAACTAATTCGCTACCAGCCGTTAGCACTTTAGGtacccaaaaaataaaatcagcAGATGCCATATCACATCAGCAGAATTTATTAGTATCATCAAAACGGCAGAACCACACGTCTCGAAATGCCGAAAAACACAACAATAATAACAACACGAGCGATCGTAGAAAGTCAATGCTGCGCAATGCTCTGCAGCAAGGCAAAGACACCGGTACTAAAACCGCAGAGGACGAAGCAATTATTGGAAGCGATGATTCAAAGAAAAGTCTGCCTCATAAAAAACGTATATCGCGAAAACTTAAGAGTAGCCCACAGAAAAAATCAGCTGCAGCAAACCGAGGCGGAGGCAACGCCCCAAACAAGATTTACAAGTGTACAAAATGCAATGAGCAGTTTACGAGTCAAGCGAGCCTTAACGAGCACAAGCAGGCTCACACGAATAACGCATTTGCGTGTGAATTGTGCCGGGAGACATTTGATACCCAGTTGAAGTTCTTTGGGCACTTAAAGACACATTACGAGCCAACGACTGTGGCAAAAACAGAGGTAAAAGTAGACATTAAAGATCAACCACAAGGAATCGTTTTGCCACCTTCAAATTTACAATGTCAGGATTGTGGAAAGACATTCAGAAGAAGGAAAACATACGAAGGACATATAAGAGACGTACATCCAAAGTTGGAAGTAGAAGAATTCAGCGAACCCGAGGACCTAATGGATGGAATACAAGTGATCGTTGCAGATGACGACGATTTGAAAGACAATGATAACATCGGTATTCATACATCAGCCGTGCTATCGAGTCACCATCCATCACAGACTCACGGACATTCCATTAATACAAACAATATCAATGCCAGTATGCACCACTTGTTAGGTGCAGCTGAAACACAACACATGCTCCTAATGGACAGCCACACAAACATAATAATGGGGACGACGGGAGCTGATACTGTTGATAACAAAACGTGGTACCGTGAGGACGAACTTCACGCTACCGAAGCCGACTTAAGGGAGCTGGAAGCTCAGCAAATCAACGAAGAACAACACCTGACCAACATGACGTCTTGTGACTTGTGTGGGGGGATTTACGAAAGCCGGGAGCACCTGATCGCCCATTTAGAGCAGTGCTGCTTCTACTTCAAGCAGGATACAATGAGCCTGGTGTCGAACCTGGAGAACACAGACGACACTAACAGTAAAGGGCCAGGAGGCAAGCGACCAAAGGCATCGAAGAAGGGCAATCAGCTTGCTTGCAAGCTGTGTGACAAGGTGTTCAGCCACAGAAACTCACTCGTGTACCACATGCGCAGCCATTCCGGAGAGAGACCACATCAGTGTGACATTTGTGGCAAGAGCTTCTTTGCTTCAAGTGCTCTCAGGGTCCACCAAAGGTTACATTCCGGTGTGAAGCCTTACAAGTGTGGAATATGCAACAGAAACTTCAGACAGTGGGGTGACCTGAAGTACCATTGCATCTCAATACACTCCGATGAGAAGCAGTACCAGTGTGAGTTCTGTGGGAAGAACTTTGCACGTAAATACTCACTGATCGTACATCGGAGAATCCACACGGGTGAGAAAAACTACCAGTGCGAGTTCTGCCACAAGACGTTCAGAGCGTCATCGTACCTGCACAACCACAGACGAATTCATACAGGGGAAAAACCGTACCCGTGCGTAATTTGTGGCAAACCGTTCAGAGTAAGATCAGACATGAAACGCCACGTCATAACTCACACTCGGAAGAGCGAGAGGGTGCCCACGTTTCAAGGGGTTGATATGGATTCCTTACCTGAAAGTTCAGATGAACTagATGCTAAGGAAGAAGTAGTAGATGAAAACTCAATGATAGAGCAAGAAACTGGTATTAAGAATGAAACTGTTCAGAAAGAAGAAAGCGTGGAACCTGTGAAACCAGAAGAAGACCCTGTAGCAGTTAATTACTCAGTCCCTACAGAATCTATAACCGCCAGAGATGGTAGCACTATTTACGTGTGGCCTCTCTACATgaactaa
Protein Sequence: MSKNHAISTSREILINPIDVNSQTSYIVLPRIGVDANLLSATNTGLYLPNTTVPEQYPPDELLSTQDLTEEDRKLAAALVAVQFVQQQKQQQQHLLQDAIIQTNSLPAVSTLGTQKIKSADAISHQQNLLVSSKRQNHTSRNAEKHNNNNNTSDRRKSMLRNALQQGKDTGTKTAEDEAIIGSDDSKKSLPHKKRISRKLKSSPQKKSAAANRGGGNAPNKIYKCTKCNEQFTSQASLNEHKQAHTNNAFACELCRETFDTQLKFFGHLKTHYEPTTVAKTEVKVDIKDQPQGIVLPPSNLQCQDCGKTFRRRKTYEGHIRDVHPKLEVEEFSEPEDLMDGIQVIVADDDDLKDNDNIGIHTSAVLSSHHPSQTHGHSINTNNINASMHHLLGAAETQHMLLMDSHTNIIMGTTGADTVDNKTWYREDELHATEADLRELEAQQINEEQHLTNMTSCDLCGGIYESREHLIAHLEQCCFYFKQDTMSLVSNLENTDDTNSKGPGGKRPKASKKGNQLACKLCDKVFSHRNSLVYHMRSHSGERPHQCDICGKSFFASSALRVHQRLHSGVKPYKCGICNRNFRQWGDLKYHCISIHSDEKQYQCEFCGKNFARKYSLIVHRRIHTGEKNYQCEFCHKTFRASSYLHNHRRIHTGEKPYPCVICGKPFRVRSDMKRHVITHTRKSERVPTFQGVDMDSLPESSDELDAKEEVVDENSMIEQETGIKNETVQKEESVEPVKPEEDPVAVNYSVPTESITARDGSTIYVWPLYMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01343340;
90% Identity: iTF_01343340;
80% Identity: -