Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540815.1:24527309-24531030[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.3e-05 0.0018 18.8 1.3 1 23 219 241 219 241 0.97

2 10 0.012 0.66 10.7 1.2 1 23 246 268 246 268 0.97

3 10 7.1e-06 0.00038 20.9 0.8 2 23 298 320 297 320 0.95

4 10 0.074 4 8.2 0.0 2 20 452 470 451 472 0.93

5 10 3.5e-06 0.00019 21.8 2.1 2 23 514 535 513 535 0.97

6 10 2.2e-06 0.00012 22.5 1.0 1 23 541 563 541 563 0.98

7 10 0.00022 0.012 16.2 1.6 1 19 569 587 569 592 0.91

8 10 3e-07 1.6e-05 25.2 1.0 1 23 598 620 598 620 0.99

9 10 0.00013 0.007 16.9 6.8 1 23 626 648 626 648 0.99

10 10 3.8e-06 0.0002 21.7 0.1 1 23 654 676 654 676 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.3e-05	0.0018	18.8	1.3	1	23	219	241	219	241	0.97
2	10	0.012	0.66	10.7	1.2	1	23	246	268	246	268	0.97
3	10	7.1e-06	0.00038	20.9	0.8	2	23	298	320	297	320	0.95
4	10	0.074	4	8.2	0.0	2	20	452	470	451	472	0.93
5	10	3.5e-06	0.00019	21.8	2.1	2	23	514	535	513	535	0.97
6	10	2.2e-06	0.00012	22.5	1.0	1	23	541	563	541	563	0.98
7	10	0.00022	0.012	16.2	1.6	1	19	569	587	569	592	0.91
8	10	3e-07	1.6e-05	25.2	1.0	1	23	598	620	598	620	0.99
9	10	0.00013	0.007	16.9	6.8	1	23	626	648	626	648	0.99
10	10	3.8e-06	0.0002	21.7	0.1	1	23	654	676	654	676	0.98

Sequence Information

Coding Sequence: atgTCGAAAAATCATGCGATTTCAACCAGTCGTGAAATACTTATTAACCCTATCGACGTCAACACGCAAACTTCCTACATAGTTTTACCTCGAATCGGAGTCGATGCAAATTTATTAAGTGCTACAAACACAGGTTTGTATCTACCGAATACTACAGTTCCTGAGCAATACCCACCAGATGAACTTCTGTCAACGCAAGATTTGACAGAAGAAGATAGGAAACTTGCAGCTGCACTTGTCGCTGTGCAATTTGTTcaacaacaaaaacaacaacaacagCATTTATTACAGGATGCAATCATACAAACTAACGCGCTACCTGCCGTTAGCACTTTAGGTacccaaaaaataaaatcaccgGATCAGCAGAATCTATTTGTATCTTCAAAACGGCAGAATCATGCATCTCGAAATGCGGAAAgacacaataataataacaacacgAGCGATCGTAGAAAATCAATGCTGCGCAACGCTCTGCAACAAGGCAAAGATGCCGGTGCTAAAACTGCAGAGGATGAAGCAATTATTGGAAGCGATGATTCGAAGAAAAGTCTACCTCATAAAAAACGTATATCACGAAAGCTTAAAAGCAGCCCGCAGAAGAAATCAGCTGCAGCAAATAGGGGCGGGGGCAACGCCCCAAACAAGACTTATAAGTGTACAAAATGCAACGAAGTGTTTACGAGTCAAGCGAGCTTTAACGAGCACAAGCAGGCCCACGCAAGTAACGCATTTGCATGCGAACTGTGCAGAGAGACTTTTGATACCCAGTTGAAGTTCTTTGGGCACTTGAAGACGCATTACGAGCCTACGGCCGTGGCGAAAACTGAAGTAAAAGAAGATGTTAAAGATCAATCACAAGGAGTTGTTTTACCGCCATCTAATTTACAATGTCAGGATTGCGGGAAGACATTTAGAAGAAGGAAAACATATGAAGGACATATAAGAGATGTACATCCAAAGTTGGAAGTAGAAGAATTCAGCGAACCCGAGGACCTAATGGACGGAATACAAGTGATTGTTGCAGACGACGACGACCTAAAAGACAACGATAACATCGGTATTCACACATCAGCTGTTCTGTCAAGTCACCATCCgtcacagacacacggacattCCATTAACACAAACAATATCAACGCCAGCATGCACCACTTGTTAGGCGCAGCTGAAACGCAACACATGCTCTTAATGGACAGCCACACAAACATAATAATGGGGACTACGGGAGGCGATACCGTAGATAACAAAGCGTGGTACCGCGAGGATGAACTCCACGCTACCGAAGCCGACTTGAGGGAACTAGAAGCTCAGCAGATCAATGAAGAACAGCATTTGAGTAACATGACATCGTGCGATTTGTGCGGGGGGATTTACGAAAGCAGGGAGCATCTGATCGCCCATTTGGAACAgtgctgtttttattttaaacaagatACGATGAGTCTGGTGTCGAATTTGGAGAATACAGATGATAGTAATAGTAAAGGGCCAGGAGGGAAGAGACCAAAGGCGTCGAAGAAGGGTAACCAGCTTGTCTGCAAGCTGTGCGATAAGGTGTTCAGCCACAGGAACTCGCTGGTGTATCATATGCGCAGCCATTCAGGTGAGAGGCCGCATCAGTGCGATATCTGCGGAAAGAGCTTCTTTGCTTCGAGTGCTCTCAGGGTCCACCAAAGGCTTCATTCCGGCGTGAAGCCTTACAAGTGTGGAATATGCAACAGGAACTTCAGACAATGGGGCGACCTCAAGTACCACTGCATCTCAATACACTCTGACGAGAAGCAGTACCAGTGCGAGTTCTGCGGGAAGAACTTTGCACGCAAGTACTCGCTGATTGTTCACCGGAGAATCCACACGGGTGAGAAGAACTACCAGTGCGAATTCTGCCACAAGACGTTCAGGGCGTCTTCGTACCTGCACAACCACAGGCGGATACACACAGGGGAGAAACCGTACCCTTGCGTGATCTGCGGTAAACCGTTCAGAGTAAGATCGGACATGAAACGCCACGTCATTACTCACACAAGGAAGAGCGAGAGGGTACCTACGTTTCAAGGGGTTGATATGGACTCCTTACCCGACAGTTCAGAGGAACTagACGCTAAAGAAGAAGTAGTTGATGAAAACTCAACAGAGCAAGAGGCCGGTATCAAGAATGAAACTGTTCATAAAGAAGAAACCGTGGAACCTGTGAAACCGGAAGAAGACCCTGTAGCCGTTAATTACTCGGTTCCTACAGAGTCTATAACCGCCAGAGACGGTAGCACTATTTATGTGTGGCCACTTTACATgaactaa
Protein Sequence: MSKNHAISTSREILINPIDVNTQTSYIVLPRIGVDANLLSATNTGLYLPNTTVPEQYPPDELLSTQDLTEEDRKLAAALVAVQFVQQQKQQQQHLLQDAIIQTNALPAVSTLGTQKIKSPDQQNLFVSSKRQNHASRNAERHNNNNNTSDRRKSMLRNALQQGKDAGAKTAEDEAIIGSDDSKKSLPHKKRISRKLKSSPQKKSAAANRGGGNAPNKTYKCTKCNEVFTSQASFNEHKQAHASNAFACELCRETFDTQLKFFGHLKTHYEPTAVAKTEVKEDVKDQSQGVVLPPSNLQCQDCGKTFRRRKTYEGHIRDVHPKLEVEEFSEPEDLMDGIQVIVADDDDLKDNDNIGIHTSAVLSSHHPSQTHGHSINTNNINASMHHLLGAAETQHMLLMDSHTNIIMGTTGGDTVDNKAWYREDELHATEADLRELEAQQINEEQHLSNMTSCDLCGGIYESREHLIAHLEQCCFYFKQDTMSLVSNLENTDDSNSKGPGGKRPKASKKGNQLVCKLCDKVFSHRNSLVYHMRSHSGERPHQCDICGKSFFASSALRVHQRLHSGVKPYKCGICNRNFRQWGDLKYHCISIHSDEKQYQCEFCGKNFARKYSLIVHRRIHTGEKNYQCEFCHKTFRASSYLHNHRRIHTGEKPYPCVICGKPFRVRSDMKRHVITHTRKSERVPTFQGVDMDSLPDSSEELDAKEEVVDENSTEQEAGIKNETVHKEETVEPVKPEEDPVAVNYSVPTESITARDGSTIYVWPLYMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01344268;
90% Identity: iTF_01344268;
80% Identity: -