Slut008795.1
Basic Information
- Insect
- Sialis lutaria
- Gene Symbol
- egg
- Assembly
- GCA_949319165.1
- Location
- OX439236.1:29651208-29663964[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5 4.6e+03 -2.5 0.0 47 61 498 511 493 515 0.78 2 3 3.1 9.4e+03 -3.4 0.0 32 38 761 767 757 771 0.83 3 3 2e-09 6e-06 26.0 0.1 9 69 804 860 799 867 0.83
Sequence Information
- Coding Sequence
- ATGGCGAGTAGTACAAAAAAGGATATTGAGGTCGTGGATTTACTTGATAACGAAATGGAAGTTGAAGAAAGTCAACATACTAATTCAGAAAAAGGAAATTCAAATGATGACGATATAATAGATTTAGATCTAAGTGACGATGAACAGCAATCAACACAAGAAAATACAACAAATGAAGTCACAAATCAGTTATCCCAAATCGACCTACAGAAAGAAATTAACGAAAATTCGAATAAAAACATCGACGAAACTTCAAACAGCAGtgagaacgaaaaaaatcaaacaaatgaATCATCAGGGTCCGAATATTCCCATAAAAGCAGCGACGAGAGTTCAGATAGCAGTTCAAACGAAAAACAATCAGATGAATCATCAAATAACGAAAACTCGAATAAAAACATAGATGAAAGTTCTAACGGCAGTACAATCGAAAAACAACCGAACGAAGCCCCAGAACTGATAATCATCGACTTAGAAAGTACAAGTAGAAGACGTAAAAAACCTTGTACAGAAAAAAAGACCAGCGATTGTATCAATTCCGAATGCAAAGGCGGGACTGATATGAAAATTgcaaacaacttttgtctgaatttctttaaagttaACTGCAACCCGAAACGGAGGCAAGTGATCTGTAAAGACTGCcgagatatatattttaacagtgTCCAAGAAATGGCCAACATGCTAGTCAACGGAGAATCTTTATTTAACTTCAAAACGTCAGTTAAAAATGATTGCGTTGAAATACTAGATTCAGATGAGGAAGTAGAAGATATTGTTAttgaatcaaaattaacaacGGAGGAAAAACAAAGCTTAGATACGGAGctaaattattacattaatttcGTGATGGATAAATATAACTTTGGTAAACAAATCGATCTAGCTAACGAGTACATAGAAACCGGTGCGACTAAACTTAAAGCATCGGTAAGTGAAATTATAAAAGAGCAAGATGATATACAGAGAAGAATAGATACCCTTCGAGAAAAACTATACGAAAATAGACCACGTAACAAAGAATTAGACCCAGTAGACTTAGTAGACGAGCATTACAATTTTACTGCGATGAAAAAGAAACTACCAATTGAACGAACAATTCCAGTCGTTCGCGGAGAGAGGCGTAGCAGTCGTAAAATCGCTAAACCCGTCAACTATAACGAGGAAGATGACGTCGATTCACCTACAACTGATTCACCTGTCTCAAATTCTGAACCTTCTTCACTTCCACAAAGTCCAAGTAAAGAAGTCGTCACAATCGGGGTATCAAACAACGCTCCTAATAACTTACCACCTGCAACGATCATCATCAGAGAAAAACCGAAAGTGGGCGAGAATTACTACGCAATGAAATCTAACTTCTTTGGTGCTTGGTCGAAATGCAAGATTCTCGAAATGTTCAACAAAGGAACCATCTTAAACGACAAGATACGGCTTGAAGTCGACACGTACCGTGTCCAATTCGAACCCTCTGGAAAGGTCCCCCAGCAAGTGATCAAATACCTAAACGCAAAACAGCTAGCATACTTAACTCCGTGTCCCGCAAAGCTTATAATTGGCACAAGAGTAATCGCAGTGTTCTGGAACGGCGAGTCTCACGCCAGGAACATGTACGCTGGGATCATAGCAGAACCTGCATCTTCTGTCAATAACTACAGATATTTGGTGTTCTTTGACGACGCCTACGCCCAATACGTCAGGCATGAAAATGTAAGGTTAATTGTCGAAGAGAACATAAACGTTTGGGAGGATCTCCCCCCCAAGACGAAAGAGTTTATTCAGAGCTATTTGAAGGAGTACCCGGAAAGGCCGATGGTCAAATTGACTAAGGGGCAGATCGTTCGTACGGAAAGAAatgGACGTTGGTGGCCAGCTAGGGTAGTTGAAGTCGATGCATCTTTGGTTTCGATGCTTTTCGAGAATGATAATCATAAGGAATGGATTTATCGAGGTTCTAGAAGACTTGCACCTTTGTACACGACGAATCAAAACCAGATATTACGACAGAGCAGAGGTTTAGTGACACCACAACGGCGTCTCCCGATGAAAAAACACGGGCCATATGTAGAATACACAAGACCAATAGAGAGCATAGATCTGAGTAAAGACGACGAAACTCCGTCACAAGTTTCAGCTACGTTACCAGAGCTACCGTCTGCACCACGAGCCGTAGCTAAGAAAAGTACAGCTTCAGCGCTGTCTTCAGTCAGTAAACAGCCGTCGATGGCTATGGTTCCTTTCTTACCTACAGGAGGAGGTGTCCAACCCATGAGTAAAGTTATTtattacgCGCCGAGAACCGAAACTCAACCTCAACTGTACAAACCTCATACGTGTGGACCTCAGTGCGCTAAGAAGGCAAAGAAGAAGCTCAACGAGCTCAAGGATTATAGTATTCTTATGAAACCTATCCTCGCCGGTTGGTTCAGGGCTTGCGTACGTTATTCTAAGAGCAAACGTGAGATACGCTACGTGACCCCTTGTTCACGAGTTGTACGAACAATGCAAGAGCTGCATTTGTATCTACGGATAACGAAGAGCGAAATGTCCGTCGATATGTTTGATTTTAACTTCTGGGTTCATATCTTGGCGGAGTTTTCGTTAGAGAAGACTATTATCAGTATTCCGGATTTATCTCATGGGCGTGAGCAGGTTCCTATTCCTTGTATGAATTACGTCGATGGGCAAGTTCCCGACCCTTGTACTTATACGACGGAGCGTGAACCAACAAAGGGTGTTAATTTGAACCTCGATGAAGATTTCTTGTGTAGTTGTGACTGCACAGATGACTGCCAGGATAAAATGAAATGTGCGTGCTGGCAACTGACACTGGAAGGGACGATGTTCGGGAAGACTAAATCACCAGATTTAACCATCGGTTACGTGTACAAGCGATTGCTAGAACCGGTAATTACAGGAATCTACGAATGCAATAAAAGATGTAAATGTGCGAGTACCTGTCTAAACCGAGTAGCCCAACAACCTCTATCTCAAAAACTTCAAGTGTTCAAAACGTCTAACCGTGGTTGGGGTATCCGATGTCTAAATGACATACCTCAAGGCTCATTTATCTGTATCTACGCTGGACAATTACTAACCGAACAAATGGCAAACGAGGGAGGAAAACACTTTGGAGATGAATATCTCGCTGAATTGGATTACATAGAAGTCGTAGAAAGATTAAAGGAAGGTTACGAGTCAGACGTACAAGAGGATGCTACAGAAACGTCTGGTGGTAGCAGAGAATCTCAAGAAGACGAACCTATAGATGATGAGGACGAAGAGAACGAAGAAAGTAACAAGAAAAAAGATAAAACTATGGAAGATTCTGATTACATTTGTAACATTCCTTCGATGTCTTTGAGCGAGTCAAGTTATAGGACGAGATTCAGATCAAGAGCGAATAGTAACAGTACGGAAACATTCGAAGGCGAGTCAGAGAAATCAGATAAATCAGAAATAGCTAGCAGTGATGTcgatgaaaataaacaaaaaccagTTGAAAAGGAAGGAGAAGTTGTTAAGGTCAAAGAAGAGCCGGTACAGATACAAATTATGGATGAGGATTGTATTACAATCACTATAAGTGATGATGAAGAAAcGACGAGAGAACCTTCGAGTTTTATTCCTACGGCGGCGGCTGAAGATAACTTGGATGTTAAATACAGGTCTGTGAGATCCATGTTTGGTGAAGGGGAGGCCTGCTACGTCATGGATGCAAAAATAACTGGAAATATCGGACGATATTTGAATcaTTCTTGCAGTCCGAATGTTTTTGTACAGAACGTATTTGTCGATACACATGATATTAGGTTTCCATGGGTTGCGTTCTTTGCTCTGACGTACATCAGGGCTGGTACAGAACTGACGTGGAATTATAATTACGATGTCGGTAGCGTACCTGGTAAAATAATGTACTGTCATTGCGGAAGCGATGAATGCAGAGGACGCTTGCTGtag
- Protein Sequence
- MASSTKKDIEVVDLLDNEMEVEESQHTNSEKGNSNDDDIIDLDLSDDEQQSTQENTTNEVTNQLSQIDLQKEINENSNKNIDETSNSSENEKNQTNESSGSEYSHKSSDESSDSSSNEKQSDESSNNENSNKNIDESSNGSTIEKQPNEAPELIIIDLESTSRRRKKPCTEKKTSDCINSECKGGTDMKIANNFCLNFFKVNCNPKRRQVICKDCRDIYFNSVQEMANMLVNGESLFNFKTSVKNDCVEILDSDEEVEDIVIESKLTTEEKQSLDTELNYYINFVMDKYNFGKQIDLANEYIETGATKLKASVSEIIKEQDDIQRRIDTLREKLYENRPRNKELDPVDLVDEHYNFTAMKKKLPIERTIPVVRGERRSSRKIAKPVNYNEEDDVDSPTTDSPVSNSEPSSLPQSPSKEVVTIGVSNNAPNNLPPATIIIREKPKVGENYYAMKSNFFGAWSKCKILEMFNKGTILNDKIRLEVDTYRVQFEPSGKVPQQVIKYLNAKQLAYLTPCPAKLIIGTRVIAVFWNGESHARNMYAGIIAEPASSVNNYRYLVFFDDAYAQYVRHENVRLIVEENINVWEDLPPKTKEFIQSYLKEYPERPMVKLTKGQIVRTERNGRWWPARVVEVDASLVSMLFENDNHKEWIYRGSRRLAPLYTTNQNQILRQSRGLVTPQRRLPMKKHGPYVEYTRPIESIDLSKDDETPSQVSATLPELPSAPRAVAKKSTASALSSVSKQPSMAMVPFLPTGGGVQPMSKVIYYAPRTETQPQLYKPHTCGPQCAKKAKKKLNELKDYSILMKPILAGWFRACVRYSKSKREIRYVTPCSRVVRTMQELHLYLRITKSEMSVDMFDFNFWVHILAEFSLEKTIISIPDLSHGREQVPIPCMNYVDGQVPDPCTYTTEREPTKGVNLNLDEDFLCSCDCTDDCQDKMKCACWQLTLEGTMFGKTKSPDLTIGYVYKRLLEPVITGIYECNKRCKCASTCLNRVAQQPLSQKLQVFKTSNRGWGIRCLNDIPQGSFICIYAGQLLTEQMANEGGKHFGDEYLAELDYIEVVERLKEGYESDVQEDATETSGGSRESQEDEPIDDEDEENEESNKKKDKTMEDSDYICNIPSMSLSESSYRTRFRSRANSNSTETFEGESEKSDKSEIASSDVDENKQKPVEKEGEVVKVKEEPVQIQIMDEDCITITISDDEETTREPSSFIPTAAAEDNLDVKYRSVRSMFGEGEACYVMDAKITGNIGRYLNHSCSPNVFVQNVFVDTHDIRFPWVAFFALTYIRAGTELTWNYNYDVGSVPGKIMYCHCGSDECRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -