Slut005001.1
Basic Information
- Insect
- Sialis lutaria
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949319165.1
- Location
- OX439234.1:4820439-4837683[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-109 2.2e-105 352.5 31.0 1 300 126 444 126 444 0.90 2 2 0.023 4.9e+02 0.0 4.1 122 172 444 494 442 504 0.84
Sequence Information
- Coding Sequence
- ATGTCAAACGACGTATGTGCGGTGAACAATACGGGTGGCGAGTTATTCTACGTCCACCCCCATAACTGTATGATGGATAAGCAGCAACAGGAGGACAACGATGACTCGGGGAGCTGCTATTCAGACGGTGACTTTAATTTTGATAGTGATGATAATGGGAACAATGCCGATGTTGTAGATCATAGTGATGATAGAAGACGGTATTCGTCGAATGAACTGATTAGTGATTTAGTGGTTGTCGATAAGTATGGTGGCGGTGATGGTGGTCATTTAAAAAGTGATGAGGAAGATGATGACGTGTTTGATGATAAAGTCGAGGACGATGATGAAGATAATTATgctataaatgattttttggtAAAATCGAAGAATGAAGCTGAGGCGCGTCTTGCTGCGAGACGTCAGGCTCGAGCTGAGGCCCGGGAGATCCGAATGCGGGAACTCGAGAGACAGCAAAAGGAGCAGGAGGAAAATGCTGATAGAGTATATGATATGTACGCCGATCCGGTGATCCGAAGTACAGCGGCTACAAGACTGGCCAATAGTGGACTTAGTGGTAGAACTAGCATGCTGTCAAACAGTAGCTATCATTCCAGTCGACGTAGTTCAGAAGATTCTCTTGAAGATGGTGGCAGTCTCAGAGATCTTAAACATGAACTACGTGAACTTGAAGAAAAATTTCGCAAGGCGATGATAACAAACGCTCAATTGGACAACGATAAAGCATCATACACATATCAACTAGAACTTCTAAACGATCGGATAGAGGATCTTGAACAAGATCATTGGCAATTACAACGCGAACATCGAGAAAAGTGTAGAGAACATGAACAATTAAAACGTGTGACTGTTAAACTGCGTGAGGATCTGTTAGCTGTGCGTTCACAGTTAGAAGACCGAGAGCAGCTGATAACTGAAGCTGGTCTCGTCATCGTACAGTGCGAAGATGAAGATAACATTGTTGACGGAGAAGAGAATGGTGTGGATACAGTGAAAGGTCCGAAACGGGTTTTAGTAAGTGCTGAGAGTGCGGAAGTGCTACAGTCAATAGGGGAAGGTAGTTTAGatgttCGACTGAAAAAATTCTTGGAAGAAAAGAAAGATTTAGAAGATCAAATAAGATCTCTCCGGTTAGAGTTAGATGAAGAACGACATAAGTCTAGAAAACGTCGAGTTAGCAGTAATTCAAATGCAATAACTAATTCAATTACATTAAACGGACCTGATTCAGATTTACTAGATAATGATGTTACAGATTTTCAAaGAGAAGCTACTAAACAATTGGATGATTATAAATTCAAGTTACAAAAAGCTGAACAAGATATTGCTACCCTTCAAGGATCAGTAGCAAGATTAGAAAGTCAAGTAATTAGGTATAAAGCCGCGGCAGAAGCTTCAGAAAAAGCTGAAGATGAATTAAAAATGGAGAAACGGAAACTTCAGAGAGAGtcaCGTGAATCACAGAGTCGTGTAGAAGAATTGGAAACTGCCAACAATCATCTTATGAAACGcctagaaaaattgaaaaatgcaaaatcaaCACTACTAAAAGATCTTTGA
- Protein Sequence
- MSNDVCAVNNTGGELFYVHPHNCMMDKQQQEDNDDSGSCYSDGDFNFDSDDNGNNADVVDHSDDRRRYSSNELISDLVVVDKYGGGDGGHLKSDEEDDDVFDDKVEDDDEDNYAINDFLVKSKNEAEARLAARRQARAEAREIRMRELERQQKEQEENADRVYDMYADPVIRSTAATRLANSGLSGRTSMLSNSSYHSSRRSSEDSLEDGGSLRDLKHELRELEEKFRKAMITNAQLDNDKASYTYQLELLNDRIEDLEQDHWQLQREHREKCREHEQLKRVTVKLREDLLAVRSQLEDREQLITEAGLVIVQCEDEDNIVDGEENGVDTVKGPKRVLVSAESAEVLQSIGEGSLDVRLKKFLEEKKDLEDQIRSLRLELDEERHKSRKRRVSSNSNAITNSITLNGPDSDLLDNDVTDFQREATKQLDDYKFKLQKAEQDIATLQGSVARLESQVIRYKAAAEASEKAEDELKMEKRKLQRESRESQSRVEELETANNHLMKRLEKLKNAKSTLLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01343044;
- 90% Identity
- iTF_01343044;
- 80% Identity
- -