Slut019367.2
Basic Information
- Insect
- Sialis lutaria
- Gene Symbol
- bab1
- Assembly
- GCA_949319165.1
- Location
- OX439245.1:15415020-15427335[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.7e-08 1.7e-05 24.7 0.0 4 35 43 75 40 80 0.91 2 3 4.3e-17 1.9e-14 53.3 0.0 1 43 191 234 191 236 0.95 3 3 0.62 2.8e+02 1.6 0.5 5 15 340 350 339 354 0.90
Sequence Information
- Coding Sequence
- ATGACTtataaaactGCCAAGTTATTAGAATCTTCTCATGCTTGGCTCGGAGCCTCTACTTCATCTATTGCTGCTGGAGAATATCCCAATCTACTCAAGTTAAAATCACCAACATGGACACAAAGCCAACTGAAAGATGCCATAGATGCTGTAGTAACTCAACGAATGCGTTTTACCCAAGCTTCATCGCACTATGGAATACCTAAAGGAACATTATACGATAACATTCTAGGAAAATCTAAACGAATGTTAGTTCTGGACGAAGCTGGTCTGACCCACGAAGAAGAAACAGCAGTTTTAGAATTTTGTTGTGACGTATCAGTATCCCCCTATAACCGGCGTACCAGAAAATCATTGGTCCAGGTTTTAGCCTTCGTCGAAAAACTTCGCAGGGAAAGAGATCCCGAGTTTATGTTTACGGGCCTTTCGGGCTTTAGATGGTGGTGGGCTTTTTataGCTACCAATACCAACTACAGTCAATGTGGCAGAAATGTTGGAGTCAAAACACACAACATCATAGTCTTGTTCACAATCTGAGGTTTCGGGAACGGGGCCCACTCAAATCGTGGAGGCCTGAGACAATGGCAGAGGCAATCTTTTCCGTGTTAAAGGAGGGCTTAAGTCTCTCCCAAGCAGCCCGGAAATACGACATACCATATCCTACTTTTGTCCTATACGCAAATCGAGTCCATAATATGCTTGGACCATCAGCTGACGGAGGCGCAGactTGCGGCCGAAAGGTCGAGGCAGACCCCAGCGTATTCTGCTAGGTGTTTGGCCCGACGAGCACATTCGCGGCGTTATACGCGCAGTCGTGTTCCGGGACTCGGCCTCTTCACCGTCGCCGCACCATCATCAACAGCACCATCTCAATAACCTCAACAGTCAGCACCAGATGCAGATCAAAGATGACATGCATCTATACCCCACAACTGCGGCAGCTGCCGCACGCCTAATGCATCACGATGGATTAAGCATTCAAAGTTTCCCTGTCGCGTCAGACGTTTCACCTGGAATGGCCGCGGCCGTAGCTGCTGTCGCACAAGGATTACGTCAACAAATGTGTAGTATTGCTTCTATCGCTCATCATGCAGGACACCCACCAGTAAGTCCAAGCGAATCACCTTTAGATACACCGATATCATCTCCACTTGCACTTGATCTGGAAAACAACCGTTCAAGCACGGGTAACATGGCAGCCAACCTGACGACTAACATCTCTAACAACATGAACAATAGTATGGCAGGGAGCAGATCAGATATGTTCCACCATCACCACCACAACCATGACGATGTCGTGGACGACGTCGAAATGGCAGTCGAGGACTTGGTGGTACCGCAGCTCAAACTTGAGCCAGTCTGTCGTGGGGAATGA
- Protein Sequence
- MTYKTAKLLESSHAWLGASTSSIAAGEYPNLLKLKSPTWTQSQLKDAIDAVVTQRMRFTQASSHYGIPKGTLYDNILGKSKRMLVLDEAGLTHEEETAVLEFCCDVSVSPYNRRTRKSLVQVLAFVEKLRRERDPEFMFTGLSGFRWWWAFYSYQYQLQSMWQKCWSQNTQHHSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSASSPSPHHHQQHHLNNLNSQHQMQIKDDMHLYPTTAAAAARLMHHDGLSIQSFPVASDVSPGMAAAVAAVAQGLRQQMCSIASIAHHAGHPPVSPSESPLDTPISSPLALDLENNRSSTGNMAANLTTNISNNMNNSMAGSRSDMFHHHHHNHDDVVDDVEMAVEDLVVPQLKLEPVCRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01342915;
- 90% Identity
- iTF_01342915;
- 80% Identity
- -