Sful018058.1
Basic Information
- Insect
- Sialis fuliginosa
- Gene Symbol
- bab1
- Assembly
- GCA_961205875.1
- Location
- OY540822.1:14842203-14858619[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4e-08 1.7e-05 24.6 0.0 4 35 62 94 59 99 0.91 2 3 5.2e-17 2e-14 53.1 0.0 1 43 226 269 226 271 0.95 3 3 0.73 2.8e+02 1.4 0.5 5 15 375 385 374 389 0.90
Sequence Information
- Coding Sequence
- ATGTTATGCTTATACCGGCAATATTCGGTCGTCAGAGCCTCGTTAGTTAGAAACAGGGTATACCACGAGAAGgCCAAGTTATTAGAGTCTTCTCATGCTTGGCTCGGAGCCTCTACTTCTTCTATTGCTGCTGGAGAATATCCCAATCTACTCAAGTTAAAATCACCGACATGGACACAAAGTCAACTGAAAGACGCCATAGACGCTGTAGTTACACAACGAATGCGTTTCACCCAAGCCTCATCGCATTACGGAATCCCTAAAGGAACTCTATACGACAACATTCTCGGAAAATCTAAACGCATGTTAGTCCTTGACGAAGCTGGTCTAACTCACGAAGAAGAAACAGCGGTTCTAGAATACTGTTGCGATGTATCTGTATCCCCTTACAACCGGCGTACCAGAAAGTCCTTGGTCCAGGTGCTAGCTTTCGTCGAGAAACTCCGCAGAGAAAGAGATCCCGAATTTATGTTCACGGGTCTTTCCGGTTTCAGGTGGTGGTGGGCTTTCTGTAAAAAGCACAGCATTGTCTCACTctattacgataataataacAAACATAGCTACCAATACCAACTACAGTCGATGTGGCAGAAATGTTGGAGTCAAAATACACAACATCATAGTCTTGTTCACAATCTGAGGTTTCGGGAACGGGGCCCCCTCAAGTCGTGGAGGCCTGAGACAATGGCAGAGGCAATCTTTTCCGTGCTGAAGGAGGGCTTAAGTCTCTCTCAAGCAGCCCGGAAATACGACATACCATATCCTACTTTTGTCCTCTACGCAAATCGAGTCCATAATATGCTTGGACCTTCAGCTGATGGAGGCGCAGACTTGCGGCCAAAAGGACGAGGTAGGCCTCAGCGTATTCTGCTGGGGGTTTGGCCCGACGAGCACATTCGCGGCGTGATACGTGCGGTCGTGTTCCGGGACTCGGCGTCATCGCCGTCACCGCATCACCACCAGCAGCATCATCTCAATAATCTCAACAGTCAGCACCAGATGCAGATTAAAGATGACATGCATCTGTACCCCACGACTGCGGCAGCTGCCGCACGTCTAATGCATCACgatGGATTAAGTATTCAAAGTTTCCCTGTCGCGTCAGACGTTTCACCTGGAATGGCTGCGGCCGTAGCAGCTGTCGCACAAGGATTACGTCAACAAATGTGTAGCATTGCTTCAATCGCTCACCATGCAGGGCATCCACCAGtAAGTCCAAGTGAATCACCTTTAGATACTCCGATATCATCTCCACTTGCGCTTGATCTGGAAAACAACCGTTCAAGCACAGGTAATATGGCAGCCAATCTGACGACTAACATCTCTAACAATATGAACAACAGCATGGCAGGGAGCAGATCAGACATGTTCCATCACCATCATCACAACCATGAtgatgtcgtggatgacgttgAAATGGCCGTCGAGGACTTGGTGGTTCCGCAGCTCAAACTTGAGCCTGTCTGTCGTGGAGAATGA
- Protein Sequence
- MLCLYRQYSVVRASLVRNRVYHEKAKLLESSHAWLGASTSSIAAGEYPNLLKLKSPTWTQSQLKDAIDAVVTQRMRFTQASSHYGIPKGTLYDNILGKSKRMLVLDEAGLTHEEETAVLEYCCDVSVSPYNRRTRKSLVQVLAFVEKLRRERDPEFMFTGLSGFRWWWAFCKKHSIVSLYYDNNNKHSYQYQLQSMWQKCWSQNTQHHSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSASSPSPHHHQQHHLNNLNSQHQMQIKDDMHLYPTTAAAAARLMHHDGLSIQSFPVASDVSPGMAAAVAAVAQGLRQQMCSIASIAHHAGHPPVSPSESPLDTPISSPLALDLENNRSSTGNMAANLTTNISNNMNNSMAGSRSDMFHHHHHNHDDVVDDVEMAVEDLVVPQLKLEPVCRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01343860;
- 90% Identity
- iTF_01343860;
- 80% Identity
- -